Ictalurus furcatus (blue catfish): 128611129
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Entry
128611129 CDS
T09387
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128611129 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128611129 (cstf2)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
128611129 (cstf2)
U7-dependent histone pre-mRNA processing factors
128611129 (cstf2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
Motif
Other DBs
NCBI-GeneID:
128611129
NCBI-ProteinID:
XP_053486398
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Position
8:complement(6319833..6341984)
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AA seq
523 aa
AA seq
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MANVATAMAAVAGRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRET
GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIES
PYGDSCPAEEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALL
QAQVVMRIVDPEIALKMLHRQASVPPVNPNSQSGPLPVSNQPHAQPSAPVSQPQAMPGMH
VNGAPQMMPPSQMGGGVPGPMAGQGPMPGQGPMPGPGPLGPGGGMQPQMGIPQGGPVPMD
RGAGNLQDSPVGSSGPAAIERPQVPMVDPRAPMRGAPPGPQGIPPRGLLGDGPNDPRGGS
LVNVGGEVVEPRGYIGGPPPHQGPPMHMAPPDMRGPHDMRGAPMLGEPRGPMMDQRGPPM
DSRAPIPPGRDPRAVETRGPVAGQRVPVAGGMQGAPSHAIPSNAPPSARPGPAPEVSSQD
HEKAALIMQVLQLTPEQIAMLPPEQRQSILILKEQIQKTAGAP
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtagcaacagccatggccgcggttgcgggaagagaccctgctgtagaccgc
tctttaagatctgtctttgtggggaatatcccgtatgaagcaacagaagagcagctgaaa
gacatcttctcagaagttggacttgttgtcagtttcaggttggtatatgacagagaaaca
ggaaaaccaaaaggttatggcttctgtgagtaccaggaccaggaaaccgcactcagtgcc
atgcgcaacctcaatggtcgagagttcagtggccgagctctgcgtgtggacaatgccgcc
agcgagaaaaacaaagaagagctcaagagtttgggcactggagctcccatcattgagtca
ccgtatggagacagctgcccagctgaggaggcccctgagtccattagcagagctgtggct
agcctgccaccagagcagatgtttgagcttatgaaacagatgaaactgtgtgtgcagaac
agtcctcaggaggctaggaacatgctcctgcagaatccacagctagcctatgcactgctg
caggctcaggtcgtcatgaggatcgtagaccctgagattgccttgaaaatgcttcatcgg
caagcttctgtgccacccgtaaacccaaacagccagtcggggcctttgccagtgtctaac
cagcctcatgctcagcccagtgcgccagtgtctcagcctcaggccatgccaggaatgcat
gtgaatggtgctccccagatgatgccaccttctcagatgggcggtggagtgccagggcca
atggcaggacaggggccaatgccgggacaaggccctatgccaggaccggggcctctggga
ccaggaggtggaatgcagcctcagatggggatcccccaaggaggccctgttcctatggac
aggggtgcaggaaaccttcaggactctcctgtaggatcatctgggccggctgctatcgag
cggccgcaagtgcccatggtagacccacgggctcctatgcgaggagcccctccaggacct
caggggattccaccaagaggcctgctgggtgatggtcctaatgatccacgaggtggatca
ctagtaaacgtgggaggagaagtagtggagccccgtggttatataggaggccctccaccg
caccaggggccacccatgcatatggcccctccagacatgcgtggacctcatgacatgaga
ggagcgcccatgttgggagagcccagaggccctatgatggatcagcgtggtccacccatg
gactctagagccccaattcctccaggccgtgatcctcgagctgtagaaactcggggtcct
gtggcaggccagagggttcctgtagcaggtggaatgcagggtgctccttctcacgcaatt
ccatcaaatgctcccccatctgcccgacctggtcctgcacctgaggtgtcctctcaagat
catgaaaaggctgctctaattatgcaggtactccagctgactccagaacagatcgccatg
cttccccctgagcagaggcagagtatcctcatactgaaagagcagattcagaaaactgct
ggtgccccttga
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