Ictalurus furcatus (blue catfish): 128611135
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Entry
128611135 CDS
T09387
Symbol
lsm11
Name
(RefSeq) U7 snRNA-associated Sm-like protein LSm11 isoform X1
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128611135 (lsm11)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
128611135 (lsm11)
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Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
128611135
NCBI-ProteinID:
XP_053486405
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Position
8:6478623..6482858
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AA seq
330 aa
AA seq
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MEESEREVISEISCDQKVSLTACKQQGTGGKDGADTDKKLDISSDQFDPLLALYSSDVPL
PYPNIRCFNNLAEYESFMKGGRGRAKPVNVEKRIRKAKRGVADPERIERLKKLMVKNPCG
GEEGESGVKRPAKHRAPKNVLTRMPLHEGSPLGELNRCVQQRLRVKVHIRSFKGLRGVCT
GFLVAFDKFWNLAMVDVDETYREPLLGEAFYHEKALTVTRLFQKLQVQAASGKAAEAETS
KADEPRAEPHNVTTSSMLGVRASRQAAERLARSVKVLAVTSTDMPHISAAGSEQRQKVSK
PRVEYGRVRTRHINQLFIRGENVLLVNIQE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaagtgagagggaagtaataagtgaaatcagttgtgatcagaaagtaagttta
accgcatgtaagcagcagggcaccggcggaaaagatggtgcagatacggacaagaagctg
gacattagttcagatcagtttgatccgctacttgccttgtattcttcagacgttcctctg
ccttacccgaacatcaggtgctttaacaacctcgcggagtatgagagctttatgaaaggc
gggcgtggaagggcgaaacctgtaaatgtggagaaaaggatccggaaagcgaaaagggga
gtcgcggatcctgagagaattgagaggctgaaaaaactcatggtgaaaaatccgtgtgga
ggagaggaaggagagagcggagtgaagagacctgctaaacacagagctccaaagaatgtg
ctcaccaggatgccgttgcacgagggcagtcctttaggagaactgaaccgctgcgtccag
cagcgactccgagtcaaagtccacatccggtcgtttaagggtctacgcggagtgtgtacc
ggcttcctggtggctttcgacaaattctggaacctggccatggtggatgtggatgaaact
tacagggagcctttacttggagaggcattctaccatgaaaaagcactgactgttacaagg
ctgtttcagaagttgcaagttcaggctgcatccgggaaagcagcagaggctgagacttca
aaagcagacgagccgcgtgctgaaccacacaacgtcaccacaagcagcatgctgggggtt
cgagcatcccgacaagcagcggagagactggcgcgatccgtgaaagtgctggcagtgacc
agcacagacatgcctcatatatctgctgctggttcagagcagagacagaaggtgtctaaa
ccaagagtggagtacggacgagtgcgtactcgtcacatcaatcagctttttatccgcgga
gaaaatgttctccttgtgaatattcaagagtag
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