Ictalurus furcatus (blue catfish): 128611208
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Entry
128611208 CDS
T09387
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04080
Neuroactive ligand-receptor interaction
ifu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128611208
04082 Neuroactive ligand signaling
128611208
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ifu04040
]
128611208
Ion channels [BR:
ifu04040
]
Ligand-gated channels
GABA-A
128611208
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
Motif
Other DBs
NCBI-GeneID:
128611208
NCBI-ProteinID:
XP_053486529
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All DBs
Position
8:9337190..9396243
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AA seq
455 aa
AA seq
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MREKLFTFHRLVFCISLTLFCGTRSVSADTSTDAFKNNITLFTRILDRLLDGYDNRLRPG
LGDRVTTVKTDIYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFEGPMNILRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVHAECPMHLEDFPMDFHSC
PLKFGSYAYTTTEVTYTWTKNASNSVVVEGESSRLNQYDLLGQTVGNETIKSSTGEYTVM
TAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSIVNDKKKEKASV
IKKNNAYAVAVANYAPNITKDSVLPTIAKGGVAEAGKAKTESKPAENKKTFNSVSKIDRM
SRIMFPVLFGTFNLVYWATYLNREPVIKDMVPSNQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagggagaagctgttcacgtttcaccgcttggtgttctgcatctccttaacgctattt
tgtggcacgaggtcagtaagtgcagacacctcaacggatgccttcaaaaacaatatcacc
ctcttcacacgcatcttggacagactcctggatggctatgataaccggctcaggcctgga
ctaggagatcgggtcaccacagtgaagactgatatctacgtcaccagttttgggcctgtt
tcagacactgatatggaatacacaatagatgtgttcttcaggcagagctggaaagatgag
aggttgaaatttgagggaccaatgaacatcctgcgtctcaacaacctgatggccagcaaa
atctggactccggacacattctttcataatgggaagaaatcagtggcacacaacatgacc
atgcctaataagctcctgcgtatccaggatgatggcactctgctttacaccatgaggttg
acggtgcatgctgagtgtccaatgcatcttgaggactttcccatggatttccactcctgt
cctctcaaatttggcagctatgcatacacaacaacagaggtgacgtacacctggacaaag
aacgcctcaaactcggtggtggtggagggggagagctcccgattaaaccagtatgattta
ctgggacagactgtaggcaatgagacaattaaatccagcactggcgagtacacagtgatg
acagctcacttccatctgaagaggaagattggatattttgtgattcagacatacctcccg
tgcatcatgacagtcatcctatcacaggtctcgttttggctcaatcgtgagtctgtgcct
gccaggactgtgtttggtgtgacgactgtactgaccatgacaactctgagtattagcgcc
cgtaactcactacctaaagtggcctatgccaccgccatggactggtttatcgccgtgtgc
tacgcttttgtcttctcagccctcattgaatttgctacagtcaactatttcaccaaacgt
ggctgggcctgggatggcaagagcattgtcaacgacaagaagaaggagaaagcctctgtg
attaagaaaaacaacgcatacgcagtggctgttgcgaactacgctcccaacatcaccaag
gactctgtcctgcccaccatcgctaaaggtggagttgcagaagcaggcaaggccaaaact
gagagtaaaccagccgagaacaagaaaaccttcaacagcgtgagtaagatcgaccgtatg
tcccgcatcatgttccctgtgctcttcggaaccttcaacctggtttattgggccacctat
ttaaacagagaacctgttatcaaggacatggtcccctccaaccaatga
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