Ictalurus furcatus (blue catfish): 128611260
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Entry
128611260 CDS
T09387
Symbol
cnot10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128611260 (cnot10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128611260 (cnot10)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
128611260 (cnot10)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_19
ARM_TT21_N
TPR_12
TPR_16
ANAPC3
TPR_8
ARM_TT21
SCAF11-like_C
TPR_MalT
TPR_7
ARM_TT21_2nd
NTS_TR130
Motif
Other DBs
NCBI-GeneID:
128611260
NCBI-ProteinID:
XP_053486617
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All DBs
Position
1:complement(18456036..18467031)
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AA seq
747 aa
AA seq
DB search
MAETNSDQVSDIKHDSIVSPGISDQEKEMATNALEAFTSGNYDDALKQLESLQELNKDDY
KIAMNKAVTEFYRSGQTTTSTLKQSLMMIKNQVHSTVEDIDGLDDVENSILHYNQAILHY
HMRQYSEAIAIGEKLYQFLEPFEEKFAQAVCFLLVDLYLLTFQPEKALHLLAVMEKHSVQ
GSNKNGKGEGMSSTARESAAQKAEFAALIEAAKSRMHQYKVRAYIQMKSLKACKREIKSV
MNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGPLKTGECVRCMFWNNLGCI
HFAMGKHNLGIFYFKKALQENDHTCAQLGDGKNSQGKKFAGIPMCALLANKRYELLYNCG
IQLLHLGRPLAAFECLMEAVQVYHSNPRLWLRLAECCIAANKGSSEQETKGLPSKKGIVQ
SIVGQGYHRKIVLASQSTQNTTYSEGQSAAIPVASMEFAAICLRNALLLLPEHQQHENKP
ENGSKNSSQSGSTESGSENSDACSGKSQEGDKFIPAAPSSPLRKQEVENLRCCILACSAY
VALALGDNLMALTHADKLLHQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVTD
VSLGVSPSEQDQGSDKGDLEPVESSGKQAPLCFPSSLSSAKAMMLFNLGSAYCLRSEYEK
ARKCLHQAASMISAKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVKPSSSPDLR
KKPPPFQSVQPMQPIQMPSSFTQVQRK
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaactaactctgaccaagtcagtgacattaaacatgacagcattgtttctcct
ggaatttcagaccaggaaaaggaaatggctacaaatgcccttgaagcatttacgtctgga
aactatgatgatgccctaaagcagctagaaagtctccaggagctgaacaaagatgactac
aagattgctatgaacaaagctgtcactgagttttacagaagtggccagacaaccacgagc
accttgaagcaatctttaatgatgataaaaaatcaggtgcattccactgtggaagatatt
gacggtttggatgatgttgaaaacagcattctgcattacaatcaagccatccttcactac
cacatgcggcagtactcagaagcaatagccattggagagaagctctaccagtttctggaa
ccttttgaagagaagtttgctcaggcggtgtgcttcctgttggtggatctgtacttgctc
accttccagcccgaaaaagcgctacacttacttgcagtgatggagaaacactctgtacaa
ggcagcaacaaaaatggcaaaggagagggtatgagtagcacagccagagaatctgctgct
cagaaagctgaatttgcagctttgatcgaggcagccaagtcccggatgcaccagtataaa
gtgcgggcctacattcagatgaaatctctcaaggcttgtaaaagagagatcaagtctgtt
atgaacacagctggaaattctgcaccatctctctttctgaagagtaattttgagtatctg
agaggaaattaccgtaaagcagtgaaactcctcaatagctctaacattgctgagcatcct
ggacccctcaagacaggtgaatgtgtgcgctgcatgttctggaataatctgggctgtatt
cactttgctatggggaaacacaacttgggcatcttctattttaagaaagccctgcaagag
aatgaccatacatgtgcacagctaggagatgggaagaacagccagggtaaaaagtttgca
ggtattcccatgtgtgctcttctggcaaataagcgctatgagctgctttataactgcggc
attcagcttctccacctcggccggccgctggccgcctttgagtgtttaatggaggcggtg
caagtataccactcgaaccctcgtctctggctgcggctcgctgagtgctgcattgctgcc
aacaaagggagttcagagcaggaaactaaaggtctgcccagtaaaaagggaatagttcag
tccattgtaggacagggatatcatcgcaagattgtcctggcatcacagtccactcagaac
acaacttacagtgagggtcagtcagcagcaatccctgttgcaagtatggagtttgcagca
atctgtttgaggaatgcgttactcctgttgcccgagcaccagcaacacgagaacaaacca
gagaatggctctaaaaactccagccaatcaggcagcacggagagcggcagtgagaacagt
gatgcctgcagtgggaagagccaagagggagacaagttcattcctgctgctccctcatca
cctcttagaaaacaggaagttgagaacctcaggtgctgcattttagcctgtagcgcgtat
gtggctttggcccttggggacaacttgatggcacttacccatgcagataaactcttacat
cagcccaagctgtcaggatccctcaagttcctgggtcatttatacgctgctgaagctctg
atctctctggaccgaatctctgacgccatcactcacctcaacccagagaatgttactgat
gtctctctaggcgtgtctcccagtgaacaagaccaagggtcagataaaggagatttagag
cctgttgaatcttcagggaaacaggctcctctgtgtttccccagtagtctgagctctgcc
aaggccatgatgctctttaatttgggcagtgcttattgtctgaggagtgaatacgagaaa
gcacgcaagtgccttcatcaggcggcttctatgatcagtgccaaagagattccaccagaa
gctattttattggcagtctacctggagctacagaatggtaacacgcagctggctctccag
atcatcaaacggaatcagttactcccgtcagtgaagccctcgtcctctccggacctgcgc
aagaagcctccgccattccagtctgtgcagcccatgcagcctatacagatgccctcttcc
ttcacacaagtacaacgcaaatga
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