Ictalurus furcatus (blue catfish): 128611450
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Entry
128611450 CDS
T09387
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04120
Ubiquitin mediated proteolysis
ifu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128611450 (syvn1)
04120 Ubiquitin mediated proteolysis
128611450 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128611450 (syvn1)
Enzymes [BR:
ifu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128611450 (syvn1)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128611450 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
FANCL_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
128611450
NCBI-ProteinID:
XP_053486947
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All DBs
Position
8:14596143..14608219
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AA seq
613 aa
AA seq
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MVRAALVTATSLALTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLMVLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYILHTIDLQSENPWENKAVYMLYTELFTGFFKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRATQPNTTPAPAAPAPPAAPAAPANG
PAPPAANVAPGVMPQFPPGLFPFWAPFPGAVPPAAPPAAPQAASSTTQTSADATQTSGAE
SGASSSSQTGTDGAAAAPVAGVPGFPFSMPPPFPSAPWLPMPPPPPFMSSMPPPPPSLSA
MSEEELRELEQEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLTTVATLSPPRAESRTGEA
SGSGKTEASSQENGTPTSPVSSATGFSQPDSTTGVEREEKKEEEEAEVDGEPSAAELRRR
RLRKLDTTPPLDH
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcagctttggtaacagctactagtctggccctgaccggtgccgtcgtggct
catgcctacttcctcaaacaccagttctatcctacagtggtatacctcaccaaaagcagt
ccaagcatggcagttttatatatccaggctttcgtgttggtttttctgctgggaaagttc
atgcgcaaggtcttctttggccagctgagagctgcagagatggagcacctgatcgagcgt
tcctggtatgccgtgactgagacctgcttagcctttacagtcttcagggatgacttttcc
ccccgttttgtggcccttttcactttgctgctcttcctcaagtgcttccattggctggct
gaagacagagtcgactttatggaaagaagtccgaacatatcatgggtcttccacttccga
gttctctctctaatggtgttgctaggagtactagacttcttattcgtcaatcatgcctgc
cacagcatcatcaccagaggagcctcggtacagctggtcttcggatttgagtatgcgata
ctgatgaccatggttctcaccaccttcatcaaatatatcctgcacaccattgacctccag
agcgagaacccgtgggaaaataaagctgtctacatgctttacacagagctctttacaggc
ttttttaaggtgttgctgtacatggcgttcatgaccataatgatcaaagtgcacaccttc
cccctgtttgccattcgacccatgtatctcgcgatgaggcaatttaagaaggctgtaacg
gatgccataatgtctcgacgagccattcgcaacatgaacacactctacccagatgcaact
cctgaggacttacaagcctctgacaatgtgtgtatcatctgtcgagaagagatggtaacc
ggagccaagaaactgccctgcaaccacatctttcactcaagttgccttcggtcgtggttc
cagaggcagcagacatgtccaacatgccgtatggatgttctgcgggcgacgcagcctaac
actactcctgctcccgctgcgccagcaccgcctgcagcacctgcagctccagctaatggt
cctgctcccccagctgctaatgttgctccaggtgtgatgccccaattccccccaggcctt
ttccctttttgggctcctttccctggtgcagttcctcctgctgctccccctgctgctcct
caggctgcctccagcaccacacagacgagtgcagatgcaacccaaacttcaggggcagaa
tcaggggcaagtagctcaagccagactggaacagatggtgctgctgcagctcctgtggct
ggagtacctggattccccttctccatgcccccaccattcccatcagcaccatggctgccc
atgcctcctcctccacccttcatgtcctccatgcctcctcctccaccgtctctgtccgca
atgtctgaggaagaactgagggagttggagcaggaaggccgccgtggtctggaggccaga
ctgcagtgcctccagaacatccacacactgctggatgccgccatgcttaacatccaccac
tatctcaccactgttgccacactcagtcctcctcgagcagagagccgcaccggtgaagcg
agtggatcaggcaaaactgaagcttccagccaagagaatggaacaccaaccagtcctgtc
agtagtgcgacaggtttttcccaaccagactcaaccacaggagttgagagggaggagaag
aaggaggaagaggaggcagaggtggacggagagccgagtgctgccgaattgagacgtcgg
cgcctacgcaagctcgacaccacaccgcctctggaccactga
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