Ictalurus furcatus (blue catfish): 128611535
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Entry
128611535 CDS
T09387
Symbol
acanb
Name
(RefSeq) aggrecan core protein isoform X1
KO
K06792
aggrecan 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ifu00535
]
128611535 (acanb)
00536 Glycosaminoglycan binding proteins [BR:
ifu00536
]
128611535 (acanb)
04091 Lectins [BR:
ifu04091
]
128611535 (acanb)
Proteoglycans [BR:
ifu00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
128611535 (acanb)
Glycosaminoglycan binding proteins [BR:
ifu00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
128611535 (acanb)
Lectins [BR:
ifu04091
]
C-Type lectins
Lecticans
128611535 (acanb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
UL45
I-set
PGDH_inter
HRM
Motif
Other DBs
NCBI-GeneID:
128611535
NCBI-ProteinID:
XP_053487087
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Position
8:complement(16903444..16916005)
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AA seq
1230 aa
AA seq
DB search
MTAFLLLCACLSISSAAVMFGQINDEDSTLSVSIPLEQPLRPLLGGKMVIPCYFRDNAIH
DPGAPTIGPLSQRIKWSYIHKGKISLILVAIGGIVHTETDYLDRVTMVNYPSVPTDVTIE
ISELRSSDSGTYRCEVMQGIEDNYDSVEMHVQGIVFHYRAITSRYTLTFDMAKAACIQNS
AIIATPEQLQAAYDDGFHQCDAGWLSDRTVRYPIHEPREPCYGDKEKYPGVRTYGIRDDN
ETYDVYCFAEKMSGRVFYSMSMKKFTFSEASEQCGNLGAQLATTGQLYLAWKAGMDVCNA
GWLADGSVRYPINIARSQCGGGLLGVRTVYRFQNQTGYPHPDSHYDAICYEGEDKVPSPY
PPVPELHATSDSRSPVPDIHMTTDFQSAVPDIHMTTDFQSPVPVIYMTTDFHSQVPDIYM
TTDTEFSVGTITSSPVAYPESVTTEGEVRGEFVTHEPWVTTMVLPPSFSPTVMETVTEDV
VVVAAAQPVLVYEVPRDNISIVSEFKGVVFHYHSGSERYAFTFHEAQKTCYSQGAEIATP
RQLQAAYEAGLHHCNAGWLQDQSVRYPNAYPEECSGDQKNASGVISHGLRPTHERYDVYC
YINQIQGDVFHVTSQANFTFQEAADSCHSHNATLASTGELYAAWSQGFHNCNPGWLSDGS
VRYPVQTLSCGVNKTGIYTIYANPNQTGFPDPYSRYDAYCIRESVYGPDSGLPSGNISGS
GLPSAEGSSSGFPSGDETGSGLSSAEGSSSDFPSGDESGSGIPSVESSCSGFLSGDESGS
GVPSAEGSSSDFPSGDVSGRTISSGGVSGSGGSGDGSSIFVIFKESVDILSAEGSAIGSS
PEAAEGSTVFYDSGMESGDMSGDHSGSGDVSGSGHYSGSGGLPSGSGSGDMINLVDNLMT
NMPFPRPKTEQEIVGGETEVSGFSGLHSGEITSGSELSGILIDDVMSGSGFNGVPSGDIM
IDFGFSGVTSGDVISGSGGLEEVNATDVSAINTTSTSTLTFTSSPLVLHLTPTTMDQPTV
TEAAQGCADGWLEFEGSCYIQFRERKNWTNAEQHCRELNSHLLSITSKQEQIFVYNHMRD
DQWIGLTDRDKQNEFRWTDESPLEYENWRPTLSNSYFDAAKECAAMIWHEFGQWTGVPCN
HHLFFTCKIKSVKCSTPPEVENARMLGNIWGTYPVNSMIRYQCDPGFTQRRHSVIRCMPD
GQWKEPTVECVKRKRLQKRSLKRHSVSSRT
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttttcttctactgtgtgcctgcctcagtatctcatctgcagcagtaatgttt
ggacaaataaatgatgaggacagtacacttagtgttagcatccccttggagcagccgctg
cgccccctgctaggggggaagatggtcatcccttgttatttccgggacaatgcaatccat
gaccctggagcccctaccattggtcctctatcacaacgcatcaagtggagctacattcac
aaaggcaaaataagcctcatcctggtggcgattgggggaatagtgcacactgagacagat
tatttggaccgggtgaccatggtgaactatccctcagtacccacagatgtcaccatagag
atctcagagctgcgctccagcgattccgggacataccgatgtgaggttatgcagggcatt
gaggacaactatgactcagtggagatgcatgttcaaggcatcgtgttccactacagggcc
ataaccagccgctacaccctgacctttgatatggcaaaggcagcctgcatccagaacagt
gccattattgcaacccctgaacagctgcaagctgcttacgatgacgggtttcaccagtgt
gatgcaggttggctttcagatcgaactgtcaggtatcccattcatgagcccagggagcct
tgttatggagacaaggaaaagtatccaggtgtacgaacatatggaatcagagatgataat
gagacctatgatgtgtactgctttgcagagaagatgtctggcagagtcttctactccatg
tcaatgaaaaagtttacattttctgaggcatctgaacagtgtggaaaccttggagcccaa
ttggccaccacagggcaattgtacttggcctggaaagctggaatggatgtgtgcaatgct
ggctggttagcagatgggagtgtgagataccctatcaacattgcccgctctcagtgtgga
gggggtctcctgggtgtacggactgtgtaccgttttcaaaatcagacaggttacccccac
ccagactcccactatgatgctatctgctatgagggagaagataaagtacccagtccttac
cctccagtacctgaattacatgcaacctcagactcccgctccccagtacctgatattcac
atgaccacagacttccaatccgcagtgcctgatatacacatgaccacagactttcaatcc
cccgtacctgtcatttacatgaccacagacttccattcccaagtacctgatatttacatg
accacagacactgagtttagtgtgggcaccatcacctccagtccagtcgcctatcctgag
agtgtcaccactgagggtgaagttcgaggggagtttgtaactcatgagccctgggttacc
accatggtactgcctccttccttctctccaactgtaatggagactgtgacggaggatgtg
gtagttgtagctgcagctcagccggttctggtctacgaggtacccagagataatatcagc
attgtttcagaatttaaaggagtggtgttccactatcactcaggttcagagcgctacgct
ttcacctttcatgaggctcagaagacctgttacagtcagggagctgaaatagccacaccc
aggcagttgcaggcagcttatgaggctggcctgcatcattgcaatgctggctggctccag
gaccagtctgtcagataccctaatgcctatcctgaggagtgctctggagatcaaaaaaat
gcttctggggtgatctctcatgggcttaggcctacacatgaacgttatgatgtgtattgc
tacatcaaccaaatacagggggacgtcttccatgtcacttcccaggcaaactttaccttc
caagaggcggcagattcctgccatagccacaatgccaccctggcttccacaggggagctg
tatgcagcctggagtcagggcttccataactgcaacccaggctggttatctgatggcagt
gtccgctacccagttcaaactctcagctgtggtgtaaataaaacaggaatttacaccatt
tatgctaaccctaaccagactggattcccagatccttactccagatatgatgcttactgt
attagagaaagtgtttatggacctgacagtgggttacccagtggaaatatatctggcagt
ggccttcccagtgctgaaggttccagcagtggcttcccgagtggagatgaaactggcagt
ggcctttccagtgccgaaggttccagcagtgacttcccgagtggagatgaatctggcagt
ggcattcccagtgttgaaagttcctgtagtggcttcttgagtggagatgaatctggcagt
ggcgttcccagtgctgaaggttccagcagtgacttccccagtggcgatgtgtcaggcagg
acaatttccagtgggggtgtgtctgggtctggtgggagtggtgatggctcaagcatcttt
gtcatcttcaaggagagtgtagacattctctcagcagagggatctgccataggaagctct
ccagaagcagcagaagggagtacagtattttatgactcgggaatggaatctggagacatg
agtggggaccactcaggatcaggtgatgtgtctggatctggacattatagtgggtctggt
ggtctgccatctggatctggaagtggagatatgatcaacttggttgataatttaatgacc
aatatgccctttccacgtcctaaaacagagcaagaaattgttggaggggagacggaggtt
agcggattcagtggactccacagtggtgaaatcacaagtggctctgaattgagtggcata
ctgattgatgatgtcatgagtggttctggattcaatggtgtgcccagtggtgatattatg
attgactttggatttagtggagtgaccagtggtgatgtcataagtggctctggaggtttg
gaggaggttaatgccactgatgtgtcagctatcaacaccaccagtacatccacattaact
tttacatccagtcccttggtattgcacctgacaccaactaccatggaccagcccacagtt
actgaagcagcacagggatgtgcagatggctggctggaatttgagggcagctgctatatc
caattcagagaaagaaagaattggacgaatgccgaacagcactgccgagagctaaattca
catctgcttagcatcacttccaagcaagagcaaatatttgtctacaatcacatgagggat
gaccagtggattggactcactgacagagacaagcaaaatgagttccgctggacagatgaa
agccctttggaatatgaaaactggagacctaccctgtcaaatagttattttgacgctgca
aaggaatgtgcagctatgatctggcatgagtttggccaatggactggtgtgccttgtaac
caccatctgttcttcacatgcaaaattaaatctgtcaaatgctccacacctcctgaggtt
gaaaatgccaggatgttaggaaacatctggggcacctacccagtcaactctatgatccgc
taccagtgtgaccctggcttcacacagcggcgccattctgtgatacgctgcatgccagac
ggccagtggaaagagcctacagtggaatgtgtaaaaaggaagagactacaaaaaagatcc
ctcaagaggcattcagtcagcagccgaacatga
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