KEGG   Ictalurus furcatus (blue catfish): 128611736
Entry
128611736         CDS       T09387                                 
Symbol
vim
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128611736 (vim)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ifu03019]
    128611736 (vim)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ifu04812]
    128611736 (vim)
   04147 Exosome [BR:ifu04147]
    128611736 (vim)
Messenger RNA biogenesis [BR:ifu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     128611736 (vim)
Cytoskeleton proteins [BR:ifu04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     128611736 (vim)
Exosome [BR:ifu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128611736 (vim)
  Exosomal proteins of other cancer cells
   128611736 (vim)
SSDB
Motif
Pfam: Filament Filament_head DUF1664 DUF7491 TolA_bind_tri BLOC1_2 GAS Trimer_CC UPF0242 PfkB
Other DBs
NCBI-GeneID: 128611736
NCBI-ProteinID: XP_053487460
LinkDB
Position
1:19558948..19564728
AA seq 458 aa
MANRTSATTRQSSSYTRIFGNERNASTRSSYSSRQFSVPARSSRLSYSSFSAPPSIITGK
NVRLRNVSLPRLTSDTLDFALSDAINTEFKANRTNEKAEMQQLNDRFVSYIEKVRFLEQQ
NKILSTELEQLRGKGTSRVGDLYEEEMRELRRQVEQVTSDKARVEVDRDNLAEDIERLRE
KLQEETLQREDAENNLQCFRQDVDNASLARLDLERKVESLQEEIIFLKKLHDEEIAELQT
QIHDQHVQVDMDMAKPDLTSALRDVRLQYENLATKNIHEAEEWYKSKFADLSEAAARNTE
AIRQAKQDASEYRRQVQALTCEVDALKGTNESLERQMGELEDNFAMESCSYQDTIARLEE
EIRNMKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITTPLPNFSSFTLRESM
METKPLVENLTKKVVIKTIETRDGHVINESTQHHEDLE
NT seq 1377 nt   +upstreamnt  +downstreamnt
atggctaaccgaacttcagcgactacacgccagtcttcttcttatacgaggatatttggt
aatgagcgcaatgcctccacccgctccagctattcaagccgccagttctcggttccagcg
cgcagctctcggctctcctacagctccttctccgctccgccgtccatcatcacgggcaaa
aatgtgcgactgcgaaatgtgagcttgccccgactcacctccgacacgctggacttcgct
ctctccgatgccatcaacaccgagttcaaggcgaaccgcacaaacgagaaagctgagatg
cagcagctgaacgaccgcttcgtcagctacatagagaaggtgcgctttctggagcagcag
aacaagattctgagcaccgagctggagcagctccgaggcaaaggaacatcccgagtcgga
gatctttacgaggaggagatgagggagttacgccggcaagtggagcaggtcaccagtgat
aaagccagggtggaagtggaccgagataatctggcggaggatattgaacgcctcagagag
aagcttcaagaagaaactcttcaaagggaagatgctgaaaacaacctccagtgtttcagg
caggatgtcgataatgcgtccttggctcgcctagacttggagcgcaaggtcgaatcccta
caagaggagataattttcctgaagaaacttcatgatgaggagattgctgagctgcagacc
cagatacatgatcagcatgtgcaggttgatatggacatggctaagcctgatctgacctct
gcacttcgggatgtccgccttcagtatgagaatctggccaccaagaacatccatgaggct
gaggaatggtacaaatccaagtttgcagatttgtcagaggctgctgctcgcaacactgaa
gccatccgccaggccaaacaggatgccagtgaatatcgccgccaggtgcaggctttaacc
tgtgaggtggatgctcttaagggcactaatgagtctctggagcgccaaatgggagaactg
gaggacaactttgccatggagtcatgtagttaccaggacaccatcgcacgtctggaagaa
gaaatccgcaacatgaaggatgagatggctcgtcacttgcgcgagtaccaggacctgctg
aatgtcaaaatggccctggacattgagattgctacctacaggaagctgctggaaggagag
gagagcaggatcaccacgccactgcctaacttctcctcttttactctgagagaatccatg
atggaaaccaaaccacttgttgagaacctgaccaagaaagtggtgattaagaccatagag
acaagagatggtcatgtgattaatgagtccactcagcatcatgaagacctggagtga

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