Ictalurus furcatus (blue catfish): 128611883
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Entry
128611883 CDS
T09387
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128611883 (ssrp1a)
03036 Chromosome and associated proteins [BR:
ifu03036
]
128611883 (ssrp1a)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
128611883 (ssrp1a)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
128611883 (ssrp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
Crystall_2
Motif
Other DBs
NCBI-GeneID:
128611883
NCBI-ProteinID:
XP_053487697
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Position
8:complement(25575354..25591468)
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AA seq
700 aa
AA seq
DB search
MGDTLEFNDIYQEVKGFWNDGRLRFSKQSVVYKSSKTGKVDSIPAPDLCLAQWRRVCLGH
GIKLATSNGHIYKYDGFKDTDFEKISTFFKANYKVELTEKDMCVKGWNWGTAKFSGPLLS
FDINDSPAFEIPLANVSQCTTGKNEVTVEFHQNDDAEVSLMEVRFYVPPSTGDEGTDPVE
IFSQNILSQADVIQATGDAVCIFKELQCLTPRGRYDIRIYPSFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDVNLTLSMSEEEVERRFE
GKLNKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKATSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGSQYTFSSIEREEYGKLFDFVN
AKKLSIKNRGIKEDIKATGGYSDSDEDEHDAYLERMKEEGKIREEGDESDGDSDVSFNPG
EEDDDIAEEYDSNASVSDSEGEEDDDSGDEGRKKKVEKKPKKPVKEKKERKPRKEKKVKD
AGAPKRPMSAYMLWLNANRERIKSENPGISVTEISKKAGEMWKQIDKSRKEEWDKKAEEA
KKQYERAMKEYKESGGGASSSAVKEKKKKGGKADEKKRKSGGEKERDKLVNESFKSKEFI
SSEESSSDSDRGKGKKRKADEDEEEIASTPPSSEAESDSE
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacactggagttcaatgatatttatcaggaggtgaaaggattctggaatgac
ggccggttgcggttcagtaaacagtctgtagtctacaaaagcagtaagacgggaaaagtg
gacagcatccctgcccccgatctgtgtctcgcacagtggcggcgtgtctgtctcggacac
gggatcaaactggcaacgagcaacggccacatctacaaatacgacggcttcaaagacacg
gactttgagaaaatctccacattttttaaggccaactacaaagttgagctgacagaaaag
gacatgtgtgtgaaaggctggaactggggcactgctaaattctcagggccgttgctgtca
ttcgacattaacgacagtccggcattcgagatccccctggccaacgtatcccagtgcacc
acgggaaagaacgaggtcactgtggaattccatcagaacgacgacgccgaagtgtcgctc
atggaggtccgcttttacgtcccgccctccaccggagacgagggcacggaccctgtagag
atcttttctcagaatattctctctcaggcagatgttattcaggctaccggagatgctgtg
tgtatcttcaaagaactgcagtgccttacgcccagaggaaggtacgatattcgtatctat
ccctctttcctacacctgcacggtaagacgtttgactacaagatcccctacaccaccgtc
ctgcgcctcttcctgctgcctcacaaggaccagaggcagatgttctttgtgatcagcttg
gatccacccattaagcagggccagacacgctatcatttcctcatcctcctcttctccaaa
gacgaagacgttaacctcactctcagcatgagcgaggaggaggtagagaggcgcttcgag
ggaaagctgaacaagaacatgtccggctctctgtacgagatggtcagcagggtcatgaag
gctctggtcaacagaaagatcacggtgccgggaaacttccagggtcattcaggtgctcag
tgcatcacgtgctcatacaaggctacctcggggctgctgtatcctctggagcggggcttc
atttacgtgcacaaacccccggtgcacctgcgcttcgaggagatctcctgcgtgaacttc
gcccgaggcaccaccaccacgcgctccttcgacttcgagatcgagaccaagcagggcagc
cagtacaccttcagcagcatcgagagagaggaatacggcaaactgttcgactttgttaat
gccaagaagctgagcatcaagaacagaggcataaaggaggacataaaggcaaccggtggc
tacagcgactccgacgaggatgagcacgatgcttatttggagaggatgaaggaggagggt
aaaatccgagaggagggagatgagtccgatggcgacagtgatgtgtccttcaatcctggc
gaggaagatgatgacattgctgaagaatatgacagtaatgcctcggtgagcgacagcgag
ggagaggaggatgatgatagcggggatgaagggaggaagaaaaaagtcgagaagaagccc
aagaaaccggtgaaagagaagaaggagagaaaaccacgcaaagagaagaaggtaaaggac
gcaggagcccctaagaggcccatgagcgcctacatgctgtggttgaacgccaacagagag
cggatcaagtccgagaatcccggaatctcggtcacggagatctccaagaaagccggagag
atgtggaaacagattgacaaaagccgcaaggaggagtgggataagaaggcagaagaagct
aaaaaacagtacgagagagcaatgaaagaatataaagaaagcggcggaggagcttcatca
tctgcggtcaaggaaaagaagaagaaaggcgggaaagcggatgagaagaaaaggaagagc
ggaggagagaaggagcgagacaaattagtaaacgaaagctttaagagcaaagagttcatt
tctagcgaggagagctcgtcggattctgatcgcggcaaaggcaaaaagcgcaaggctgat
gaggatgaggaagaaattgcctctacgccaccgagctcggaggcagagtccgactccgaa
tga
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