KEGG   Ictalurus furcatus (blue catfish): 128611967
Entry
128611967         CDS       T09387                                 
Symbol
itga6l
Name
(RefSeq) integrin alpha-6
  KO
K06485  integrin alpha 6
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu04382  Cornified envelope formation
ifu04510  Focal adhesion
ifu04512  ECM-receptor interaction
ifu04514  Cell adhesion molecule (CAM) interaction
ifu04518  Integrin signaling
ifu04810  Regulation of actin cytoskeleton
ifu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128611967 (itga6l)
   04514 Cell adhesion molecule (CAM) interaction
    128611967 (itga6l)
   04518 Integrin signaling
    128611967 (itga6l)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128611967 (itga6l)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128611967 (itga6l)
   04810 Regulation of actin cytoskeleton
    128611967 (itga6l)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    128611967 (itga6l)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ifu04147]
    128611967 (itga6l)
   04515 Cell adhesion molecules [BR:ifu04515]
    128611967 (itga6l)
   04090 CD molecules [BR:ifu04090]
    128611967 (itga6l)
Exosome [BR:ifu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128611967 (itga6l)
  Exosomal proteins of breast milk
   128611967 (itga6l)
Cell adhesion molecules [BR:ifu04515]
 Integrins
  Integrin alpha subunits
   128611967 (itga6l)
CD molecules [BR:ifu04090]
 Proteins
  128611967 (itga6l)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3
Other DBs
NCBI-GeneID: 128611967
NCBI-ProteinID: XP_053487838
LinkDB
Position
8:27688041..27708699
AA seq 1030 aa
MELWRITLIINLWLLSSLNASAFNLDNTNVLRKNGAPGSLFGYSLAMHHQLKPTDQQLLL
IGAPHAKALPSQKANITGGLYRCKFTTQSDDCERIPIDTEDARPGQGLDHRENQWMGVHV
KSQGPGGKVVVCAHRYQQWIHNNQLVLGRCFILEQNLIVEDTRTFCRNRANSKDRFGYCQ
QGVSAAFTKNKKYIVFSGPGAYDWKGTVRMEPVEDFLLDPYETGDQNTFNEWSIPLTLSS
YLGFALDSGMNLLKKEEQVVVAGAPRSNHSGEVLILKPDDGVDERSLRVAHILRGPGLAS
SFGYSLVVIDLNADGWDDLVVGAPQYSTTDKEAGTGGAVYVYINRRDSQDWDRLQPDVLT
GNKDSMFGLAVANIGDINHDGYNDFAVGAPYDSDGDGAVYIYLGKTGHFSQKDNQVLLGK
THKIKLFGYSLAGNTDIDGNGYPDLAVGSLSDSVLVYRAKPVISIEKSLTLVPSEMNFQE
RDCQKIHCIITAKSCFSYTTYPATYNPRLQIHYKLNADEQWVQDGHQSRLVYQDNQEGNI
VLQTPGQKECVKNQLKLRANTENKLTEIPVSVSVSLPQNSPRQRLSQSSLPALQPALDDL
QPRESTAKFMFLNPDCGSDDVCQSNLQLQYNFCTKDQHQDSCSPLARENGVAVISPGSGN
TALEITITNHGGDDAHLAQLVANFPESLPLSSVILKQDSKVNIQCDVDGSKTRAECNLGN
PFKRDGEGTFYLLLNTDRLTPSITDVNVTLNLQTISVQNISEIVAEAQVFFELYLQVFGL
AKPSQVYFQEMKNKSDEEIGEPVQYEFTISNMGRPLKSFASATLNIQWPKENKEGKWLLY
LLQITGPNNQSIPCTPASEISPIRHPQEVKSREKREAEGEAKVSALSTGGLLSLFGRHYK
YLTCGDELKCVELRCPLKAADRTAVTLYSRLWSSTFVEDYSSLNYLDIVLNASLSLDGSQ
KNIRLQESQTQVRLTVFPKKKPTFLSRVPWWVGLLSVVLALLLISLLIYFLSKLGCLDCA
MCTEDNEYKN
NT seq 3093 nt   +upstreamnt  +downstreamnt
atggagctgtggagaataacactgatcataaacctgtggctcctcagtagtctgaatgca
tctgctttcaacctggataataccaacgtactgaggaaaaacggagcgcctgggagtctg
tttggatattccctcgcaatgcaccaccaactcaaacctactgatcagcaactcttgctg
attggtgcgccacatgcgaaagccttacccagtcagaaagccaacataactggcggtctc
tatcgctgtaagttcacaacacagagtgacgactgtgaacggatccccatagacactgaa
gatgcacggccaggacagggattagaccaccgggaaaaccagtggatgggtgtgcatgtg
aaaagccagggcccaggaggaaaagtggtggtttgtgctcatcgctaccagcagtggatc
cataacaatcagctggtactgggcaggtgcttcatcttggaacagaacctaatcgttgaa
gacacgaggacgttctgtcgcaatcgggccaactctaaggacaggttcggttactgtcag
cagggcgtctctgcagctttcaccaaaaacaagaagtacatcgtgttctcgggtccaggt
gcctatgactggaaaggtactgtccgcatggagcctgttgaagactttcttctggatccc
tatgaaaccggagatcagaatacatttaacgaatggagcattcctctgaccctcagcagc
tatttaggctttgctctggactcaggaatgaatctgttaaagaaagaagagcaggttgta
gtggcgggagcaccacgatccaatcacagtggtgaggttctgatcttaaagcctgacgat
ggggtggacgagagaagtctgcgggtagctcacattctcagaggcccgggtctggcgtcc
tctttcgggtactcactggttgtaatagacctcaatgcagacggatgggatgaccttgtg
gttggtgctcctcagtacagcacaacagacaaggaggcaggaacaggaggtgctgtttac
gtttacataaaccgtcgagatagccaagactgggacagattacagccagatgttcttact
ggcaataaagactccatgtttggattagcggtggcaaacattggggacatcaatcacgat
ggatacaacgattttgcagttggagcaccttatgatagtgatggtgatggtgcagtgtac
atttacctcggcaaaactggacacttttcacaaaaagacaatcaagttttactgggtaaa
acccataaaatcaagctgtttggctattccttggctggaaacacggatatagatgggaat
ggctatccagacttagccgtgggctcactttctgacagtgtacttgtctacagggctaaa
ccagtgattagcattgagaaatctttgacattagtacctagtgagatgaacttccaggaa
agagactgccaaaaaatacactgcattataacagctaaatcctgcttctcctacacgacc
tatccagcgacgtataaccccagactgcagattcattacaagctgaacgctgatgaacag
tgggttcaggacggtcatcagtcccgccttgtttaccaggacaatcaggaaggaaacatt
gtgctccagacaccgggtcaaaaagaatgtgtgaaaaaccaactcaagctccgggccaac
acggagaacaagcttacagaaatccccgtcagcgtgtcagtgtctctgccgcagaacagt
cctcgtcagagactgagccaaagctctctacctgctctccagccagctctcgatgatctc
cagcctcgggaaagcacagctaaattcatgtttttgaaccctgactgtggaagtgatgat
gtctgtcagagtaatctacagctgcagtacaacttctgcaccaaagaccaacatcaggac
tcgtgctcaccactagccagggagaatggagtggcagtaatctcccccggttctgggaac
acggccctggagatcactataacgaatcacggaggagatgacgctcatctcgctcaactg
gttgcaaactttccagaatctctacctttatcatcggtcatccttaaacaagatagtaaa
gtgaacatacagtgtgatgtagatgggagtaaaaccagagctgaatgtaatcttggaaat
cctttcaaaagagatggagagggaacattttatctcctactaaacaccgatcgtctgacc
ccgagcataacggatgtcaacgtgacgctgaatctccagacgatcagcgtgcaaaacatt
tcagaaatcgttgcagaggctcaagtgttctttgagctgtatcttcaagtgtttggactg
gccaaaccttctcaagtgtactttcaagaaatgaaaaacaaatcagatgaggagatcgga
gaacctgtgcagtatgagtttacaatcagtaacatgggtcggcctctgaagtcctttgcc
tctgcaaccctcaacatccagtggccaaaggagaataaagaaggcaagtggctcctgtat
cttctgcagatcactggaccgaacaaccagagcatcccgtgtactccagcctcagaaatc
agcccaatcagacatcctcaggaggtgaagtccagagaaaaacgagaagcggaaggtgaa
gcgaaggtgtcagctctcagcactggtggactcctgtccttatttggaagacattacaaa
tatctgacatgtggtgacgaattaaagtgtgtggagctcagatgccccctaaaggcagca
gacagaactgcagttaccctgtactctcgactctggagcagcactttcgttgaggactac
agctccctcaattatctggacattgtactaaatgcttctctcagtcttgatggatctcag
aagaacatcaggcttcaggaatctcaaacacaggtgagactaacagtgttcccaaagaag
aagccgacttttctcagtcgagtcccctggtgggtgggtctgctcagcgtggtgctcgca
ctgttgctaataagcctcctgatctacttcctgtccaagctgggatgccttgactgtgcg
atgtgtactgaagacaatgagtataaaaattaa

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