Ictalurus furcatus (blue catfish): 128612010
Help
Entry
128612010 CDS
T09387
Symbol
pcdh18b
Name
(RefSeq) protocadherin-18b isoform X1
KO
K16499
protocadherin delta 2
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ifu04515
]
128612010 (pcdh18b)
Cell adhesion molecules [BR:
ifu04515
]
Cadherins
Protocadherins
128612010 (pcdh18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
IglC
Motif
Other DBs
NCBI-GeneID:
128612010
NCBI-ProteinID:
XP_053487885
LinkDB
All DBs
Position
8:28712982..28719765
Genome browser
AA seq
1179 aa
AA seq
DB search
MHSNSVGITTFYWKDSKMEQMKPHTGATALILLALLHLALLATPATAVTRDPPGKTLKYK
VLEEQRVGTVIGRLREDAAAALARLPSSVSPRFRAMHAGGSAPLIAVREEDGEISVGSRI
DREALCGSHPNCTLEFDVVTLPAEHLQLFRVQVEVLDVNDHSPRFARSVVPVDISESAAV
GTRLPLDAASDPDVGDNALHAYSLERNGFFRIDVRTRTDGARYADLVVVRELDRETQSSF
QLLLSAADSGSPPRSGSTLLKINVLDSNDNSPVFEQQAYAVSLLENSPPGTLLVDLNATD
PDEGTNGKIIYSFSSHVSLKILETFKIDPENGQITLIKKVDYETTSSYELDIQAQDMGPN
SIPGHCKIIVKVVDVNDNKPKININLMTQGKEEVAYISEAAPVDTFIALVRVDDSDSGLN
GEVTCKLHGHGHFRLQKTYENNYMILTNVSLDREKRSEYSLTVIAEDRGSPSLSTIKHFT
VQVQDENDNPPRFEKSRYEIFKSENNSPGAYLTSVSATDPDLGTNGQVTYSILESTVQGS
SISTYVTIDPSNGAVYALRSFDREEVGRLAFTVQAQDGGGGASLSANATVILTVLDENDN
APIIVAPALSNHTADVPLWRQAELGHLVTVIKTTDRDAGANGEVTCSIVGGNEEGLFLME
PRRCELRTNGSVDSLVRESFDLALLVQDRGASTRLSTRAVLRVLLRDHPESHFIIPSDSG
SQATLDLSMIIIISLGAICGVLLLVMVLFATRCSRDQKDPRHSYNCRVAESTYQNHPKKP
ARQIHKGDITLVPTVNGTLPVRAHPRSPSGSPAPDSRHSHHSRQSLNSLVTISSNHVPEN
FALELAHATPPVEQVSQLLSILHQGQYQPRPSFRGNKYTRSYRYALNEMDKFSLKDSGRG
DSEAGDSDCEMGRESPLLGEGFGEVFTPDGQHRPHPAMKLCTEECRVLGHSDQCWMPPLS
SQATSDYRSNLYIPGEDPQQAPAPETAQSGESTLRKKSFSTFGKESEEEEGQEGEVEKGE
DICGTTSLLSEMNSVFQRLLPASLDAYTETNETERVPVGAGSLERRKGHLPGKANAASAY
QHGVAAWAANTHFQNPGHGHAPASHMSTSLAAPPLAAPLSMSASCSKWLPAMEEIPENHE
EDELESVLHGKRCESRSEIMDASELVAEINKLLQDVRQS
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcaactctgttggaattacgactttttattggaaggattcaaagatggaacag
atgaagcctcacaccggagccacagcgctgatcctcctcgcgctcctgcatcttgcgctt
ttggcaacaccggcgacggcggtaacgcgcgatcctcccggtaagactctgaagtacaaa
gttctggaggagcagcgcgttggcacggtgatcggcaggctgcgggaggacgcggcggca
gcgctggcgcgtttgccgagctcggtgtcgccgcgctttcgcgctatgcacgcaggcgga
agcgcgccgctgatcgccgtgcgcgaggaggacggtgagatcagtgtgggctcgcggatt
gaccgagaggcgctgtgcggcagccacccgaactgcacgctggaatttgatgtggtcact
ctgcctgccgagcacctgcagctcttccgtgtccaggttgaggtgctagatgtgaatgac
cactcgcctaggtttgcccgttcagttgtgcctgtggacatttcagagagtgcagccgtc
ggaacacgcctgccattggacgccgcttcagacccggatgtgggtgacaacgcgctgcat
gcgtactcactggagcgaaatggcttcttccgcattgatgtccgcactcgtaccgatggt
gcccgctacgctgacctggttgtggtacgagagctggacagggagacccagtctagcttc
caacttctcctcagtgcagctgattcgggctcgccgccacggtctgggtccacacttctc
aaaatcaacgttctggactccaatgacaacagcccagtgtttgaacagcaggcctatgcc
gtcagccttctggaaaactctccacctggaacactactggtggatttgaacgccacagac
ccagacgaaggcaccaatggcaagatcatctactcattcagcagccatgtgtcactcaag
attcttgagacattcaagattgaccctgaaaatggacaaatcactttaatcaagaaggta
gactatgagactacctcgtcctacgagctcgatatccaggcgcaggacatggggcctaat
tcaattccgggccactgcaaaatcatcgttaaagtagtggatgtaaatgacaataagcct
aaaattaatatcaacctgatgacgcaggggaaggaggaggtggcctacatctcagaggca
gcaccagtggacaccttcatcgcattggtgcgtgttgatgacagtgactcaggtctgaat
ggagaggtgacgtgcaaactgcatggccacggccactttcggctgcagaaaacctacgag
aacaactacatgatcctgaccaatgtgtctctagaccgtgagaagcgctctgagtacagc
ctgacggtgatcgcagaagacagaggttctcctagcctctctaccatcaaacatttcacc
gtgcaagtgcaggatgagaacgacaacccacctcgctttgagaagagccgctatgagatc
ttcaagtctgagaacaactcacctggtgcatatctcacttcagtgtcagccactgatcca
gatctgggcaccaatggtcaggtgacctactcgattttggaaagcacagttcaggggagc
tccatctccacctatgtgaccatcgacccatcaaatggtgccgtgtatgcgttgaggagc
ttcgatcgagaagaggtgggccgcttggccttcacagttcaagcacaggatggtggaggt
ggggcctcactcagtgcaaatgccactgtcattctgactgttctagatgagaatgacaat
gcgccaatcattgtggcaccggcactcagcaaccacacagccgatgtgccactttggagg
caggccgaacttgggcacttggtgacggtcatcaagaccaccgatcgggatgcaggagcc
aatggagaagtgacgtgctccatcgttggtggaaatgaagagggattgttcttgatggaa
ccacgtaggtgcgagctcaggaccaatggaagtgtggattcgttggtacgggagagtttt
gacctggctttgttggttcaggaccgcggggcatctacccgtctctccactcgtgccgtt
cttcgtgtcctgttacgtgaccaccctgagagtcactttatcataccttctgattctggc
agccaggccacactcgacctctccatgatcattatcatctccctgggtgctatctgtggt
gtgctgctgctcgtcatggtcttgtttgcgacacgctgctctagagaccagaaggaccca
cgccactcatacaactgccgtgtggcagagtccacttaccagaaccaccccaagaaaccg
gccaggcagatccacaagggtgatatcacactggtacccactgtgaatgggacattgcct
gtgagggcacatccacgctcaccttcagggtctccggcacctgacagcaggcacagccac
cacagccgtcaatcactcaacagccttgtcaccatctcctccaatcatgttccagagaac
ttcgccttggagcttgctcatgctacaccacctgtggagcaagtctcacagcttctgtcc
atacttcatcagggccagtaccaacccagaccgagtttccgtggcaacaaatacactcgg
agctacaggtatgcgctgaatgagatggataagttcagtctgaaggacagtggccgcggg
gacagtgaggccggagacagcgattgtgaaatgggaagagagtctccgttgctgggagag
ggattcggtgaggtcttcactcctgatggacagcaccgaccacacccagcgatgaagctg
tgtacggaagagtgccgcgtcctgggtcactccgatcagtgctggatgcccccactgtcc
tcacaggccacatccgattatcgaagcaacctttacattcctggtgaggatcctcagcaa
gctccggcccctgaaaccgcccagtcaggagagtccaccctgaggaagaagagcttctct
actttcggtaaagagagcgaggaagaggaagggcaagagggcgaagtagagaaaggagag
gacatttgcgggaccacgtctctgctctcggagatgaacagcgttttccaaaggctcctc
cccgcatcactggatgcctacactgagaccaatgagacggagagggtgcctgtaggggcg
gggtcactcgaaaggaggaagggacacctgccaggtaaagcgaacgccgcttcggcctat
cagcatggcgtcgcagcctgggccgccaacacgcatttccagaacccaggccacggccac
gcgcccgccagtcacatgtctacctcactggcggcgccgcctcttgctgcacctctatcc
atgtcagcttcctgttcaaaatggctgccggcgatggaggagattccagaaaaccacgaa
gaggacgagctagagtcggtgctgcatggcaaacgttgcgagagccgcagcgagatcatg
gacgccagcgagcttgtcgcagagattaacaaacttctacaggatgtgcggcaaagctag
DBGET
integrated database retrieval system