Ictalurus furcatus (blue catfish): 128612022
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Entry
128612022 CDS
T09387
Symbol
pcdh10b
Name
(RefSeq) protocadherin-10b isoform X1
KO
K16499
protocadherin delta 2
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ifu04515
]
128612022 (pcdh10b)
Cell adhesion molecules [BR:
ifu04515
]
Cadherins
Protocadherins
128612022 (pcdh10b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
128612022
NCBI-ProteinID:
XP_053487896
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All DBs
Position
8:complement(29281084..29306736)
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AA seq
1050 aa
AA seq
DB search
MEMLLLWLALCLAHRVASQIRYSVPEETERGTFVGNIAEDLGLDLTKLASRRFQTAPGSR
GSPYLDVNVENGALLVRERIDRERVCKQSASCVLHLEVFLEDPLELFRVEVEVTDVNDNA
PSFPESDVTVEISESATPGTRFPLEAAFDPDVGSNGLRTYEITANGHFALDVQTQTDGNK
FAELVLEKPLDREQQAVHRYVLTAVDGGQPARTGTALLVVRVLDSNDNVPTFDRAVYSAS
LAENAPAGTLVIQLNATDSDEGSNGEVVYSFGSHVSSRARELFDVDARTGRIEVRGEVDF
EESSLYQLYVQAKDMGPNAVPAHCKVLVKVTDVNDNAPEIAFSTVTESVSESAAPGTVIA
LLSVTDKDSGDNGRTRVEILGDVPFRLKSEFGNYYTVVTDGPLDREVAEAYTVTVTARDG
GAPPLTSSKSVEVRVSDENDNAPTFSQLVYDVHVTENNVPGAYIYAVSARDPDAGDNSRV
TYSVLDREILGMSVLTYVSVNPENGYLYALRSFDYEQLKEFSFTVEARDAGSPELHSNAT
VHVVVVDQNDNAPTVIAPLGKNGTAREPLPRSAEPGYLVTRIVATDADDGENARLSYSIQ
RGNEDGLFRMDWRTGELRTARRVSAAKRDAQQHQQRRLYELLVEVRDHGQPPLSCSAVVQ
VALVDGLPAAASAEGRGGGGERERGGAARAKDASLDLTLILIVALGSVSFVFLLAMIALA
VRCRKDKKLNVYAGCNASCCFCCGRQARSSRGVSSGNGGSKKKQKKQKKLSKSDIMLVQS
ANSADVSAHAGVGCGVGSAQVPVEESGSFGSLRRGQNYCYQVCLTPESANTDLLFLKACG
AGASRAAPDTEHSPRGGIHTTYTEQQQPDIISNGSLLSSETKHQRAELSYLVDRPRRVNS
SAFQEADIVSSKDSGHGDSEQGDSDHDATHRGHSSGADLFSNCTEECKALGHSDRCWMPS
FVPTESRQGADYRSNLHVPGMDAVPDSEVFEGDAFTGDQSFSTFGKEPPHTYQHQQHLQA
STLDTRELHALLSNSRTPYKANYLSRKRIC
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggagatgctactactttggctcgcgctgtgtctggcgcacagggtcgcctctcagatt
cgttactcggtaccggaggagacggaacgtggcacgttcgtgggcaacatcgccgaggac
ttgggactggacctgaccaaactggcctcccgccgctttcagacggcaccgggctcacgc
gggagcccgtacctggacgtgaacgtggagaacggcgcgctgttggtgcgagagcgcatt
gaccgggagcgcgtgtgtaagcagagcgcgtcctgtgtcctgcacctggaggtgttcttg
gaggatcctcttgagctcttccgagtggaagtcgaggtgacggacgtgaatgacaacgcg
cccagcttcccggagagcgacgtcacggtggagatcagcgagagcgccacgcccgggacg
cgtttcccgctggaagcagccttcgacccggacgtgggcagcaacgggctgaggacttac
gagatcacagcaaatggtcacttcgcactggacgtgcagacgcaaacggacggaaacaag
ttcgcagagctggtgcttgagaagcctttggacagagagcagcaggcggtgcaccgctac
gtgctcacggctgtggacggcgggcaaccggcgcgcacgggcacagcgctcttggtggtg
cgcgttctcgactcaaacgacaacgtgccaacgttcgaccgggccgtgtactcggcgagc
ctggccgagaacgcgcccgcgggcacgctggtgatccagctcaacgccaccgactcagac
gagggctcaaacggcgaggtggtttactcattcggcagtcacgtgtcgagccgcgcgcgc
gagttgtttgacgtggacgcgcgcacgggccgcatcgaagtgcgcggcgaggtcgacttt
gaggaaagcagcctctatcagctctatgtgcaggccaaggacatggggccgaacgccgtg
cccgcgcactgcaaggtgctcgtaaaagtcacggatgtcaacgataacgcaccggagatc
gccttcagcaccgtgactgagtctgtgagcgagagcgcggcaccgggcaccgtgatcgcg
ctgctcagcgtcaccgacaaggactctggagataacgggcgaacgcgcgtagaaatcctt
ggcgacgtgccgttcaggctcaagtcagagtttgggaactactatacggtggtcacagac
ggcccgctggaccgcgaggtcgccgaggcgtacaccgtgacagtgacggcgcgtgatgga
ggcgcgccgccgctcacctcgagcaagtccgtagaggtgcgcgtctcggacgagaatgac
aacgcgcccacgttctcgcagctcgtgtacgacgtgcacgtcacggagaacaacgtgccc
ggggcttacatttacgccgtgagcgcacgggatccagacgccggcgataactccagggtc
acctactccgtcttggatcgcgagatcctgggcatgtctgtgctcacgtatgtgtccgtg
aacccagaaaacggctacctttacgcgctgcgctcattcgactatgagcagctcaaagag
tttagcttcacggtagaggcgcgggacgcagggagccccgagctgcactcaaacgcgact
gtgcacgtggtggtagtggatcaaaatgacaacgcaccgactgtgatcgcgcctctgggc
aaaaacgggacagccagagagcctttgccacgctcagccgaaccgggctacctggtcaca
cgtatagtcgcgacagacgcagatgacggtgagaacgcgcgtctttcctacagcatccag
cgcgggaacgaagacggattgttccgcatggattggcgcacgggagagttgcgcacggct
cgtagagtgtctgcagccaaacgggacgcgcagcagcaccaacagagacgcctttacgag
ctgctcgtggaagtgcgcgatcacggccagccgccgctctcgtgcagcgccgtagttcag
gtcgcgttagtggacggtcttccggcggcggcctcagcggagggacgcggaggaggcgga
gagcgtgagcgcggtggcgcggcccgagccaaagacgcgagccttgacctcaccctcatt
ctgatcgtcgccctcggctcggtgtcgtttgttttcctgctcgccatgatcgccctcgcc
gtgcgctgccgcaaagacaagaagctgaacgtgtacgcgggctgcaacgcgtcctgctgc
ttctgctgcgggagacaggcccgatcatcccgcggtgtcagcagcggcaacggcggcagc
aagaagaaacagaagaagcagaagaaactcagcaagtcagacatcatgctggtgcagagc
gccaactcggcagatgtgagcgcgcacgccggagttggctgtggagtcgggagcgcgcag
gtgcccgttgaagagtccggaagcttcggttcgcttcgacgcggtcagaattactgctat
caggtctgcctcactcccgagtccgccaacaccgacctgctcttcctgaaggcatgcgga
gcgggagcgagccgtgcggccccggacaccgagcacagcccacgaggagggatacacacc
acatacacggagcaacaacaaccggacatcatctctaacgggagccttctctccagcgag
acgaagcaccagcgtgccgagctcagttacctggtggacaggccgaggcgtgtgaacagt
tcggccttccaggaggcggacatcgtgagctccaaagacagtggacacggagacagcgag
cagggagacagcgatcatgacgccacgcatcgcgggcactcctccggagcggatttattt
tcgaactgcacggaggagtgtaaggcgctgggtcactcggaccgctgctggatgcccagc
ttcgtgcccaccgagtcccggcagggcgccgactaccgcagcaacctgcacgtgcctggc
atggacgccgtgcccgactctgaggtatttgagggtgacgcgttcacgggcgatcagtca
ttctccacgttcggtaaagagccgccccacacataccaacaccaacagcacctccaagcc
tccacgctagacaccagagagctccatgcgctcctgtctaactcgcgcacgccttacaaa
gccaactatctgtcgcggaaaaggatttgttag
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