Ictalurus furcatus (blue catfish): 128612098
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Entry
128612098 CDS
T09387
Symbol
rnf130
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130 isoform X1
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128612098 (rnf130)
Enzymes [BR:
ifu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128612098 (rnf130)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128612098 (rnf130)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
PspB
DUF4577
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
128612098
NCBI-ProteinID:
XP_053488001
LinkDB
All DBs
Position
8:complement(31124292..31176300)
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AA seq
450 aa
AA seq
DB search
MQKRRRTSSSCVTLFLWSVLLSLVLPRCVSGAGTDKTDKTVVNKEEYYSATINATVQDVR
GNAKRVISKEDGRYGQNSPKSEVKGIIITPAAVNGVVDMQGCCPYTRFIIPPKTTHWIAL
LQRGKCMFKEKILKAAAFNASAVLIYNNSSKEDTVTMAHEGTGDTVAVMITESLGKDLLS
FLEKNETVWVSVSVGSRGSVKNLNRGSLVFVSVSFIVLMIISSAWLIFYFIQKIRDTNAR
DRSQRRLGDAAKKAISKLTTRTVKRGDKVRTCLLTSSPFTQEAEPDFNHCAVCIEGYQLN
DVVRILPCKHVFHKMCVDPWLNEHCTCPMCKLNILKALGIMPNLKCVDNVAFDMERMTRT
HSSSQRVALMDVSSETSVSVEPLTRSGSSQLLSESELSHTHTHRSGEINIAVTKEWFIVG
SFAVLSVLTLCYMIIRATGNNYDNTALDTA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaagacggagaacgtcttcatcctgcgtcactttgttcctctggtccgtcctt
ctctcactcgtcctgcccaggtgtgtgtccggtgcaggtacggacaaaacggacaaaacg
gtggtgaacaaagaggaatattacagcgctacaattaacgccaccgtgcaggacgtcagg
gggaacgccaagcgtgtgatatcgaaggaggacggcaggtacggacagaactcgcccaaa
tcagaggtgaaggggataataattacacctgctgcagtcaacggagtggtggatatgcag
ggctgctgtccgtacactcgtttcatcattcctccaaagacgacgcactggatcgctctg
cttcagagagggaagtgcatgtttaaggagaagatcctgaaggctgctgcctttaacgcc
tccgcagtactcatctacaacaacagctccaaagaggacacggtcaccatggcacatgaa
ggcaccggggacacggtggcagtgatgattactgagtcgttggggaaggacctgctgtct
ttcttggagaagaacgagacagtgtgggtttcggtgtctgtcggttctcgaggttcggtg
aagaacctgaaccgtggctcactggtgttcgtctccgtctccttcatcgtcctgatgatc
atctcctccgcctggctcatcttctacttcattcagaagatcagagacactaatgctcga
gatcgaagtcagcgacggctcggagacgctgcgaagaaagcgatcagtaaattgacgact
cggacggtgaagagaggcgacaaggtgaggacctgtttactgacatcatcaccatttaca
caggaagcagaacctgattttaatcattgtgctgtgtgcatcgaaggctatcagctgaac
gacgtggtccgcatcttaccgtgcaaacatgttttccataagatgtgtgtggatccgtgg
ctgaacgaacactgcacctgtcccatgtgtaaactcaacatcctcaaagctctgggcatc
atgcccaacctgaagtgtgtagataacgtggcgtttgatatggagcggatgacccgcact
cactcctccagccagagggtggcgctgatggatgtgtcgtctgagacgagtgtcagtgtg
gagccgctcacacgctccggctcgtcccagctgctgtccgagtccgagctctcacacaca
cacacacaccgcagcggggagatcaacatcgccgtcaccaaagagtggtttattgtgggc
agcttcgccgtcctcagtgttttaacgctgtgctacatgatcatcagagccaccggcaac
aactacgacaacacggcattggacacggcatga
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