Ictalurus furcatus (blue catfish): 128612165
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Entry
128612165 CDS
T09387
Name
(RefSeq) ribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128612165
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
128612165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
128612165
NCBI-ProteinID:
XP_053488027
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Position
1:complement(21018357..21026620)
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AA seq
605 aa
AA seq
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MQPACQHGTSELQLKVDFFRKLGYSPQEVQSVLLKLGLDTDTNAVLGELVRSGARESPTT
SQESDDGSSGFSHRGGGGSSSKDLQKDIQRSPAVDEIDSDLKPIVIDGSNVAMSHGNKEV
FSCRGIELAVNYFLERGHRNITVFVPSWRKEQPRPDVLISDQHILAELERKKIVVFTPSR
RVGGKRVVCYDDRFIVKLAYDLDGIIVSNDTYRDLQSERLEWKRCIEERLLMYSFVNDKF
MPPDDPLGRHGPNLDNFLRKKPLLPDTKRQHCPYGKKCTYGIKCKFYHPERTSQSQRSLA
DELRDNARLSSSVHCCSKESRRSGASLRGPCHTESGFSSYFPSLEQELEYKLSLEPAVCV
TRNQLSESMQHYWDDVPTKYQACKTASHTPLDWHSLYSTYLTNPSSSSDSGLGSYESQFS
EASQGHDDSYRINSRHNNRFYEQQDAPLVCTCSSESVVQPSIHQYPHSQHPPNCFDYGAL
QFCRPSSNRAYSLPNYMQPNELHHSQPKAGPDTVWLPQTRTAFSLPNPRHAVGPHGPADI
YGSSQGALSLNTVPFEAEREETRKKLHAIFNPHLVDKVMGMFPKLKDAQQLAAEILKLKS
KGELF
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctgcttgccagcatggcacctccgagcttcagctgaaagtggactttttccgt
aagctgggctattcaccacaagaggtacagtcggtgctgctgaaactaggcttggacacg
gacacaaatgctgtactgggggagttggtgcgttctggagccagagagtcacccacaacg
agtcaggagagtgatgatggaagctctggatttagccaccgcggaggaggtggatccagc
agtaaagatctccaaaaggacattcagcgctcaccagcagtagatgaaattgacagtgac
ctaaaacccattgtgattgatggaagcaatgtggctatgagtcatggaaacaaggaagtt
ttttcatgtcgtggaattgagctggcagttaactacttccttgagagaggacacaggaac
atcacagtttttgtgccctcatggcgaaaagagcaaccaaggccagatgtcctcatttca
gatcagcatattctagcagagctggaaaggaaaaagatagttgttttcacaccctcccgg
cgggtaggaggtaagcgagtggtctgctatgatgatcgcttcatcgtcaaacttgcctat
gatctggatggcattattgtgtccaatgacacataccgtgaccttcagagtgaacggctt
gaatggaagcgctgtattgaggagaggctactcatgtactcctttgtcaatgacaagttc
atgccaccagatgacccacttggtcgccatggtccaaacttggataattttctcagaaag
aaacctctgctaccagacaccaaacgccagcattgtccttatggaaagaaatgcacgtac
ggaatcaaatgcaagttttatcaccctgagcgaaccagccagtcacagcgttctcttgca
gatgaactgagggacaatgctcgcctgtccagttctgtccactgctgttcaaaggagagc
cgaagatcaggagcttcccttagagggccctgccacactgagtctggtttcagttcatac
tttccatctttagagcaagagctggagtacaagctatccctggaacctgctgtttgtgtg
acaagaaaccaactcagtgaaagcatgcagcactactgggatgatgttcctaccaagtac
caggcctgcaagacagctagccacactcctctggactggcatagtctgtactccacatac
cttactaatccttcatctagctcagattctggccttggctcctatgagagccagttttca
gaggcatctcaaggacatgatgattcatataggattaactctaggcataacaacaggttt
tatgagcaacaggatgcacctcttgtttgcacttgctcttctgagtcagttgtccaacca
agcatccatcagtaccctcattcccagcatccacccaattgctttgattatggtgcactc
cagttctgtagaccctctagcaatcgagcctacagccttcccaattacatgcagcctaat
gagctccatcacagccaaccaaaagctggtcctgacacagtgtggctccctcagactcgc
acagcttttagtttacccaaccctcgtcatgctgttggaccccacggacctgctgacatt
tatgggagcagccagggagcactcagtctaaatactgttccatttgaggcagagcgagaa
gagacgaggaagaaactccatgcaatttttaatccccatcttgtggataaggttatggga
atgttcccaaagctaaaagatgcccaacaacttgcagcagagattctcaagctcaagtcc
aaaggcgagttattctaa
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