Ictalurus furcatus (blue catfish): 128612249
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Entry
128612249 CDS
T09387
Symbol
hmbox1a
Name
(RefSeq) homeobox-containing protein 1a isoform X1
KO
K24885
homeobox-containing protein 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128612249 (hmbox1a)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
128612249 (hmbox1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
HTH_31
CUT
HTH_37
DUF494
Motif
Other DBs
NCBI-GeneID:
128612249
NCBI-ProteinID:
XP_053488177
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All DBs
Position
9:2966118..2972899
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AA seq
475 aa
AA seq
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MSHYTDEPRFTIEQIDLLQRLRGSGMTKQEILCALDTLERLEREHVQKFGPRHSYAGGTR
GVNSHGSSSSVAPSSTAPTLSSSASVATQTVFHGGTPSPSPTSYDTSPPPTIAVPMGVVA
PAAQNGRDCLAPVSNGKHSPPQYPVSARAFGFEPAEEEVDIDDRVEELMRKDSNIIKEEI
KAFLGSRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTTPGATLA
MRPAPMALEDIVEWHQSAPPINCSPGSFRLRRGSRFTWRKECLAVMESYFNDNQYPDEAK
REEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILETHGIDVQ
SPGGQSNSDEIDGNDFSEPGAEPGLGTVRNVFNSAFNKYCRFHCHSVFTFDTEHKTNSGT
VTKLIAFFFVKREPWPEVLVSVSPPHPLPGAQDMPRAGIHSILTLHNRNGAFKAS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcacattacaccgacgagcctcgcttcaccatcgagcagatcgatttgctgcagcgg
ctgcgcgggagcggcatgaccaagcaggagatcctgtgcgcactggacacactggagcgc
ctggagcgcgagcacgtgcagaagttcggcccgcgccactcctacgcaggagggactcga
ggagtcaacagccatggcagctccagttctgttgctccgtccagcaccgctcctactctg
tcctcgtccgccagcgtggccacgcagaccgttttccacggcggcactccgtccccgtct
ccaaccagctacgacacctctccgcccccgaccatcgccgtgcccatgggcgtggtagcg
ccagcggctcagaacggccgtgactgcttggcgcccgtcagcaacgggaagcactcgcct
ccccagtaccccgtatccgctcgggccttcggcttcgaaccggctgaggaggaagtagac
atcgatgaccgggtggaggagctcatgagaaaggacagtaatataatcaaagaggagatc
aaggccttcttagggagccggagaatttcgcaagccgtcgtcgcccaagtcacaggcatc
agtcagagtcggatctcccactggctcctgcagcagggttccgatctgagcgagcagaag
aagagagctttctaccggtggtaccagttggagaagaccacgcccggagccactctggct
atgagacccgcccccatggcgctggaggacatcgtagagtggcaccagagcgctccaccc
atcaactgcagccccgggagcttccgtctgcgccgcggcagccgcttcacctggaggaag
gagtgtctcgccgtcatggagagttactttaacgacaaccagtatcctgacgaggccaag
cgggaggaaatcgccaacgcctgcaatgctgtgatacaaaaaccaggaaagaagctttcc
gatctagagcgggtcacgtctctgaaagtgtacaactggtttgctaaccggcgaaaggag
attaagagaagagccaatatagaagcagcaatcctggagactcatgggatcgacgtgcag
agtccaggcggtcagtccaacagcgacgagatcgacggcaacgacttcagcgagccgggc
gccgagccggggttagggacggtaaggaacgtatttaactccgcttttaataaatactgc
aggttccactgtcacagcgtctttacttttgacactgaacataagacaaattcaggaact
gttacaaaactgattgcatttttttttgttaaaagagagccgtggccagaggttttggtt
tcagtgtcacccccccacccccttccaggtgcacaggacatgcctagagctggaatacac
tctatacttacattacataaccgcaatggagctttcaaggcctcatga
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