Ictalurus furcatus (blue catfish): 128612252
Help
Entry
128612252 CDS
T09387
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39
Organism
ifu
Ictalurus furcatus (blue catfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
Prok-RING_4
TRAF3_RING
zf-RING_6
zf-Nse
Sina_RING
DUF4988
ParA
Borrelia_P83
Y1_Tnp
Motif
Other DBs
NCBI-GeneID:
128612252
NCBI-ProteinID:
XP_053488186
LinkDB
All DBs
Position
9:complement(3317764..3327265)
Genome browser
AA seq
547 aa
AA seq
DB search
MDTPTDFAGESSSLLTEEQLQCSICLEVFTDPVTTTCGHNFCNSCLKQSWDTRQHYYCPY
CKEKFTKRPEVKINITLREVADHFKKKTVSDKSQVLCDFCTDVKQEALKSCLDCGVTLCS
SHLESHNNVPKYKKHKVINAVENLEKYICQEHERPLEMFCRDDQKCVCQFCTVTDHKNHN
VIPLEEESGQRKSQLGKTQTELQQMIQERLKKIQEINHSVELSKRNTEKEKSDSIEVFTA
LIRSIERSQTELLEVMEEKQKAAEKQAEGLIKELEQEIDELKRRDTELEQLSHTDDHLHL
LQIYPSLCIAPHTKNWTEIRINTELSVEALRTALSQLQKTLNEKLSVTLNEKLKEKVSTE
LKRIQQYAVDVTLDPDTANLYLILSDDGKQVTCGDTKQNLPDTPKRFTFYANVLGNQGFS
SGRFYYEVQVSGKTEWSLGVVRESVNRKGKFETFKPQDGFWTVVLRNGNEYTARDDPCIS
LSLREKPQKVGVFVVYDEGLVSFYDIEVMSHIYSFTGQSFTEKLYPYFSPCLNDGGKNSA
PLIISRV
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggatacacctactgactttgcaggtgaatccagcagcctcctgactgaagagcagtta
cagtgttctatctgtctggaagtgttcactgatcccgtcaccactacatgtggacacaac
ttctgcaacagctgcctcaaacaaagctgggatacgcgtcaacattattattgtccatat
tgcaaagagaaattcaccaagagacctgaagtcaagattaatataacactgagagaggtt
gcagatcacttcaagaagaaaacagtctcagataagtctcaggttctttgtgacttctgc
actgatgtgaagcaggaggccttgaaatcctgtctggattgtggtgtgactctctgttca
tctcatttagagtctcataataatgttccaaaatataagaaacacaaagtaataaatgca
gtggagaacctggagaaatacatttgccaggagcacgagagacctctggagatgttctgc
agagacgatcagaagtgtgtgtgtcagttctgtactgtgacggaccacaagaatcacaat
gttattccattagaggaggagagtggacagaggaagagtcagctggggaaaacacagacg
gagctgcagcagatgatccaggagcgactgaagaagatccaggagattaatcactcagta
gagctcagcaaaagaaacacagagaaggagaaatcagacagtattgaagtcttcactgct
ctgattcgctccattgagaggagtcagactgagctgctggaggtgatggaggagaagcag
aaagcagcagagaagcaggctgaaggactcattaaagagctggaacaggaaatcgatgag
ctaaagaggagagacactgagctggagcagctctcacacactgacgatcatctccacctc
ctacagatttatccgtcactgtgcatcgctccacacaccaagaactggactgagatcagg
attaacacggaactgagtgtggaagctctgaggacggctctgtctcagcttcagaagact
ctgaatgagaaactcagtgtaactctgaatgagaagctgaaggaaaaagtctccacagaa
ctgaagaggattcagcagtatgcagtggatgtgactctggatcctgatacagctaatctc
tatctcatcctgtctgatgatggaaaacaagtgacatgtggagacacaaagcagaatctc
ccagacaccccgaaaagattcactttttatgcaaatgtcctgggaaatcagggtttctcc
tcagggagattttactatgaggtgcaggtcagtgggaagactgagtggagtttaggagtg
gtcagagagtctgttaacaggaaggggaaatttgagacatttaaacctcaggatggattc
tggactgtggttctgaggaacgggaatgagtatactgctcgtgatgatccctgtatctcc
ctctccctgagagagaaaccccagaaggtgggcgtgtttgtggtttatgatgagggtctg
gtctccttttatgacatcgaggtcatgtctcatatctactctttcactggtcagtctttc
actgagaaactctatccatacttcagtccttgtttgaatgatggaggtaaaaactcagca
ccactgatcatctctcgtgtgtaa
DBGET
integrated database retrieval system
