Ictalurus furcatus (blue catfish): 128612261
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Entry
128612261 CDS
T09387
Symbol
srp54
Name
(RefSeq) signal recognition particle 54 kDa protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03060
Protein export
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
128612261 (srp54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ifu02044
]
128612261 (srp54)
Enzymes [BR:
ifu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
128612261 (srp54)
Secretion system [BR:
ifu02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
128612261 (srp54)
Eukaryotic Sec-SRP protein
128612261 (srp54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
nSTAND3
ResIII
DUF2209
SRPRB
NPHP3_N
AAA_33
AAA_17
AAA_22
AAA
AAA_19
MobB
APS_kinase
AAA_30
PduV-EutP
MeaB
AAA_16
AAA_31
nSTAND_NTPase7
MMR_HSR1
IstB_IS21
6PF2K
Zeta_toxin
Thymidylate_kin
AAA_18
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
128612261
NCBI-ProteinID:
XP_053488201
LinkDB
All DBs
Position
9:17488794..17495392
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AA seq
504 aa
AA seq
DB search
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI
DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKSWTPTKGKNNIIMFVGLQGSGKTTTCTK
LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAAEGVEKFK
SENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV
DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI
EGLIDKVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFSKQPNRVQRVARGAGVATRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagcggacttggggaggaagataacatcggcgctgagatctctcagcaatgcc
accatcatcaatgaagaggttttaaatgctatgctaaaagaggtctgtgctgccctgcta
gaagctgatgtgaacatcaaactggtgaagcagctcagagaaaatgtcaaggcagccatt
gacctcgaggaaatggcctccgggctgaataagaggcgaatgatccagcatgctgttttc
aaggagcttgtcaagctggtggaccctggtgtgaaatcatggacacctacaaaaggaaag
aacaacatcatcatgtttgttggccttcagggtagtggaaaaaccacaacatgtactaag
ttggcatattactaccaaagaaaaggatggaaaacatgcttgatctgtgctgacactttt
agagcaggtgcctttgatcagctgaagcaaaatgcaacaaaagccagaattccattttat
ggaagttacacagaaatggatccagtcataatagctgctgagggagtcgaaaaattcaag
tcagaaaactttgaaataatcattgtcgacactagcggtcgtcataagcaagaagattcg
ctgtttgaagaaatgctacaggtttcaaatgctgtgcaacccgacaacattgtgtacgtg
atggatgcatccattggtcaggcttgtgaggctcaggctaaggccttcaaagacaaggta
gatgtggcgtctgtcatcgtcactaagctggatggccatgctaaaggtggtggcgccctc
agtgcagttgctgccacaaagagtcctatcattttcatcgggacaggcgagcacattgat
gattttgagccttttaaaactcagcccttcataagcaaactgcttggaatgggagacatc
gagggactgatagataaagtgaatgaactcaaacttgatgataatgaggagctaattgac
aaacttaaacatggtcagttcacactccgggacatgtatgaacagttccagaacatcatg
aaaatgggaccttttgggcaaatcatgggtatgatcccaggctttggaacagacttcatg
agtaaaggcaatgaacaggaatctatggccaggttaaagaaactcatgaccataatggac
agtatgaatgaccaagaactggacaacaaagacggtgcaaagttgttcagtaagcagccg
aaccgggttcagcgggtggcgcggggtgcaggtgtagccaccagagacgtgcaggaactg
cttacccagtacacaaagttcgcccaaatggtcaagaaaatgggtggaattaaaggttta
tttaaaggaggagacatgtccaagaatgttaacccatctcagatggccaaattgaaccag
cagatggcaaagatgatggatccaagagtgctgcaccacatgggtggcatggctggtcta
cagtcgatgatgaggcagtttcagcaaggggctgctggcaacatgaaaggaatgatggga
ttcaacaatatgtga
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