KEGG   Ictalurus furcatus (blue catfish): 128612320
Entry
128612320         CDS       T09387                                 
Symbol
larp1b
Name
(RefSeq) la-related protein 1B isoform X1
  KO
K18757  la-related protein 1
Organism
ifu  Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ifu03019]
    128612320 (larp1b)
Messenger RNA biogenesis [BR:ifu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     128612320 (larp1b)
SSDB
Motif
Pfam: LARP1_HEAT La RVE6
Other DBs
NCBI-GeneID: 128612320
NCBI-ProteinID: XP_053488344
LinkDB
Position
9:complement(25425767..25482950)
AA seq 1100 aa
MSAEVASECRLGEGDQNTAGKSDTPRSPDEGQQEQGHRAPKVEGKHPKVESKPPKQGAMD
ALSKNNTNHKESDQNVSSNNAEIGQKNVTEAPPPKVNPWTKNNTPCPPNNSTNNTQETES
QNSAKVVRANKPRSRKSSKSSDFSDITNWPTPGEIASKEQQQNALNAQGQKVPAGRREGR
RERGGEKREKESGSDGSDSKENREAQQETHLTTELEKEAGKDTQSSVPRRRGFRRDFNDE
TSSVRSEGSSVRGGLRGRGKSRGRGRGRGRGRFDYSHSYRESYADGATVPPEYGANMMYF
YDDGNRVQMYTIEESLLKEYIKRQIEYYFSLRNLERDFFLRRKMDAKGFLPISLIAGFRR
IQALTTDVSLIMEAVKSSDVVELVDEQIRRKDDPEHWPIPGPPANSSHTDFSQLIHCPEF
IPGQTFTSLTAVSTSPANQTADEPPPATNGQLNDNSDTGTKPHSEKSSTVQSKSVSSSDE
RTAEGLSSSTADPESQWVQVEKRHRNASGKNKPSETLHPHLLPSSNSEPSLLTERSTSAP
ANPPPEADQEELDFLFDEELEQLAAPRKNTFTDWSDDDSDGELDDSDVNKILIVTQTPPH
LRKHPGGDRTGNHVSRAKITAELAKAINDGLYYYEQDLWTGDENQLDGTNVKDLETFKKL
SVISQDEFDTLTPKLPVDPNQEVPPPPPCQDEPSVAHSLPTDVPESPSAPRTPRTPHTPR
TPGRQDPNKTPRFYPVMKDSGNIDGKTPRKRKTRHSSNPPLESHVGWVMDSREHRPRTNS
ISSSNASPSEGAPLQSASYGCTPQSLPKFLHPSHELLQENGFTQQVYHKYRRRCLNERKR
LGVGQSQEMNTLFRFWSFFLRDNFNRKMYEEFKQYAVEDAKENYRYGLECLFRFYSYGLE
KRFRPDIFKDFQEETLHDYEKGQLYGLEKFWAFLKYSRIKGQVIDPKLQQHLRKFKSIDD
FRVEPPMGEEQGGRRRRHSSSGGDEGRHKRYNSTSSSSSKQAPPTKASNEPAAEGEAKTD
STNRSASPANTKLSHGPANSKLTSTNQRAIAGLAKSASTNQKATAKSTTVNEATSAMKEK
VKKNPQSEMASKTKDAHPPN
NT seq 3303 nt   +upstreamnt  +downstreamnt
atgtcggctgaagtggcgagtgagtgtcggttaggagagggcgaccaaaacaccgcgggg
aagtctgatacaccgaggagtccggacgaggggcagcaggagcaggggcaccgagctccc
aaagtcgaggggaaacatcccaaagtcgagtcaaaacccccgaaacaaggggccatggac
gcattgagcaaaaacaacacgaaccacaaggaaagtgaccaaaatgtgtccagtaacaat
gcagaaatcggccagaagaacgtgaccgaggctccgccgccgaaagtaaacccttggacg
aagaacaacacgccgtgtcctcccaacaactcgacaaacaacactcaagaaacggaatcc
cagaactctgccaaagtggtacgtgccaacaagcccagatccagaaagtccagcaagtcg
agtgatttcagtgacatcaccaactggcctacccctggagaaatagccagtaaggagcag
cagcagaacgcactgaatgcacagggtcagaaagtcccagccgggcggagagagggaagg
agggagcgcggaggagagaagagagagaaggagagcggtagtgacgggagcgacagtaaa
gagaacagggaggcacagcaggagacgcatctaaccaccgagctggagaaggaggcgggc
aaagacactcagagcagtgtcccccgcaggagaggcttcaggagggatttcaacgatgag
acgtcaagcgttcgcagcgaggggagcagtgtccgtggcggcctccggggacggggcaaa
agtcgtggcaggggcagaggtcgcggccgaggacgttttgactactcccacagttatcgg
gaatcttatgccgatggtgccaccgtgccgccggagtacggggccaacatgatgtatttc
tatgacgacgggaaccgggtacagatgtacaccatcgaagagagtctgctcaaggagtac
atcaagcgccagatcgagtactacttcagcctgcgcaacctggagcgggatttcttcttg
aggagaaagatggatgccaagggcttcctgcccatctctctcatcgccggcttccgccgc
atccaagccctcaccaccgatgtcagtctcatcatggaggcagtgaaaagcagtgatgta
gtggagctggtcgatgagcagattcggagaaaggatgatccagagcactggccgatccct
gggccgcccgccaactcctcacacacggacttcagccaactcattcactgtcctgagttt
atcccgggacaaaccttcacctctctcactgcagtgtccacttccccggccaatcaaacc
gcagacgagcctcctcctgctacaaacggccaattaaacgacaactccgacaccggcacc
aaaccgcactctgagaagtcgtccacggttcagtcgaaaagtgtgtccagctcggatgaa
aggaccgctgaggggctgtccagcagcacggctgatccggagagccagtgggttcaggtg
gagaaacggcacaggaacgcgtctgggaaaaacaagccatctgaaacacttcatccccac
cttcttccttcctctaattctgagccttccctcttaacagaacgctcaacgtcggccccg
gcaaatccaccacctgaggctgaccaggaagaactcgacttcctgtttgacgaagagctg
gagcaactcgcggcacctcgcaagaacactttcaccgattggtcagacgacgactccgat
ggcgagctggatgacagcgacgtgaacaagatcctgatcgtcacacagacgccaccgcac
ttgcgcaagcacccgggcggcgaccgcacaggcaaccacgtctcccgcgccaaaatcacc
gccgagctcgccaaggccatcaacgacggcctctactactacgagcaggacctgtggacg
ggggatgagaatcagctggatggtaccaacgttaaggatttggagacctttaagaagctc
agcgtgatcagccaggatgagttcgacactttgacccctaaattacccgttgaccccaac
caggaagtgccacctcctcccccctgccaagacgagcccagcgtggcccactctctgcca
actgacgtcccagaatccccgagtgctcccaggacccctcgtaccccacacaccccacgc
acacctggtcggcaagacccaaacaaaacaccccgcttctatcctgttatgaaggacagt
ggaaacattgatggaaagactcccaggaagaggaaaacacgccacagctccaacccacca
ctggaaagtcatgtcggctgggtgatggactctcgtgaacacaggccacgcactaactcc
atcagtagttcaaatgcttcaccatcagagggcgctccactgcagtcagccagttatggc
tgcacccctcagtctctgcccaaattcttgcacccatcccacgagttgctccaagagaac
ggcttcacccagcaggtttatcacaagtaccgtcgacggtgtctcaatgagaggaaacgg
ttgggagtgggtcagtctcaggagatgaacacactcttcaggttctggtccttcttcctt
agagacaacttcaacaggaagatgtacgaagagttcaagcagtatgcggtggaggatgca
aaagaaaactacaggtacggattggaatgcctcttccgcttttacagttacggtttggag
aagaggttcagaccagacatcttcaaggactttcaggaggaaactttgcacgattacgag
aaaggtcagctgtatggtctggaaaagttctgggccttcctgaagtattcacggattaaa
ggccaagtcatcgaccccaagctgcagcagcacctccgcaaattcaagagcatagatgac
ttcagagtggagccgccaatgggagaggagcaggggggcaggagacggagacactcgtcc
tctggaggggatgagggcagacacaaacgttacaactcaacctcgtcttcatcatcaaaa
caggccccgcccaccaaggcttctaacgagcctgctgctgaaggggaagccaaaacggat
tcaaccaatcggtcagcttctccagcaaacactaaactcagtcatgggccagcaaacagc
aaattgacctcaaccaatcaacgggccattgcggggctggccaaatcagcttcaaccaat
cagaaagcgactgccaagagcaccacagtcaatgaagcgacttcagccatgaaggagaag
gtgaagaagaatccacaatctgaaatggctagcaaaaccaaagatgcacatccgccaaac
taa

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