Ictalurus furcatus (blue catfish): 128612374
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Entry
128612374 CDS
T09387
Symbol
samd4a
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128612374 (samd4a)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
128612374 (samd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_3
Motif
Other DBs
NCBI-GeneID:
128612374
NCBI-ProteinID:
XP_053488464
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All DBs
Position
9:complement(1557233..1604154)
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AA seq
700 aa
AA seq
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MMFRDQVGVLASWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLAECTELHVLEV
EANNPAVIGQWQAEPKERLISLVLTHLPLLKPGNGEAKSEYMRLLPKILTHTIEFGRHLE
ESRQLLSYALIHPATSLEDRADLALWLNHLEERAATRTAGGGGGGDSLERVPSSHHLYAQ
HQRYGSDDRLNGWQGSRDSGIATWHTQQQQQGCENGHLLLYPSSSVPSTINTVGTGSGSN
SILQSAGQHSPLKRSISLTPPISGSSTQPLGHGWLSQEDLRGRGAPLTPDHAPLSPQSSV
ASSGSGGSEHLEDGSGLGMALRSSFSEEGSGMRDVPAWLKSLRLHKYAGLFSTLTYDEMM
SLTEQQLEAQSVTKGARHKIIISIQKLKERQNMLRSLEKDVLEGGNLRSPLQELHYIIGT
PIKAFNSVAESPQRPLLSADGKSAASGVCVSGGEAESSTTLVAEGDIPAQFTRVMGKVCT
QLLVSRPDEENISSYLQLINKCELHEAFTETQKKRLSSWRQQVQKLVRSFPRKPLLDMTG
YRQPRSSRGFGQSNSLPSAVCVGSSVCSRRNLRQFPVPSRSLPAPRLGLLGTAGLLTHTH
THTHTPRSSNNTPTNLKQGRQGLWFANPGGSNSMPSRTHSSVQRTRSLPVHTNPHTMAMF
QQADLQIPVTEPDINNRLESLCRSMTEHALEDGVDRTSTI
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgtgaccaggtgggcgtcttggccagctggtttaagggctggaacgagtgt
gagcagaccgtagctctgctgtcactgttgaagcgggtgagtcggacccaggctcggttc
ctgcagctctgtctggagcattcgttagctgagtgcacagagctgcacgttcttgaagtg
gaagccaacaacccagcggtgattgggcagtggcaggccgagccaaaagagcgtctcatc
tctctggtcctgacccacctgcccctcctcaagccgggcaacggcgaagctaaaagcgag
tacatgcggctacttcccaaaatcctcacgcacacaatcgagtttgggcggcaccttgag
gagagcaggcagcttctctcgtacgcgcttatccacccggccacttctctggaggacagg
gccgatctcgctctctggctcaaccatctggaggaacgggcagccactcgcactgccgga
ggaggaggaggaggagattcactggagcgagtgccgtcttctcatcatctctatgcccag
catcagcgttacggctctgatgaccgcctcaacggctggcagggatctcgagactcgggt
attgccacctggcacacacagcaacagcagcagggctgtgagaatggacatcttcttcta
tacccatcatcatcagtcccgtctaccatcaatacagtgggcacaggaagtggaagcaac
tccatcctgcagtctgcgggtcagcacagtcctctgaagcgctccatctctctcactccc
ccgataagcggctcgtccactcagcctctaggacacggctggctctcacaggaggatctg
cggggacggggggcacctctcacccctgaccacgcccctctgtcccctcagagcagcgtg
gcatcgtcagggagtggcggcagcgagcacctagaggacggctcaggcctgggaatggca
ctccggagctccttcagcgaggaggggagcggcatgcgggatgttccagcatggctgaag
agtctgcgtctgcacaagtacgccggtcttttctccactctgacctacgacgagatgatg
tcactgaccgagcagcagctggaggcgcagagcgttactaaaggggcgcggcacaagatc
atcatcagcatccagaaactgaaagagagacagaacatgctacgctctctggaaaaggat
gtattggaaggcgggaatctgcgttctcctttgcaggagctgcattatatcatcgggact
cccattaaagcgttcaacagcgtggccgagtctccacagcgccccctactgagtgccgac
ggaaagagcgcagccagtggagtgtgtgtgagcggaggggaagctgagagcagcaccaca
ctcgtagcagagggggacattcctgctcagttcacgcgcgtcatgggcaaagtgtgcaca
cagctgctggtgtctcggccggatgaggagaacatcagctcgtatctgcagctcatcaat
aagtgtgaactccatgaggcgttcacagagacgcagaaaaagaggctgtcgtcatggagg
cagcaggtgcagaagctggtacgctcgtttccgcggaaacctctcctggacatgactgga
taccgtcagccgaggagcagccgtggtttcggtcagtccaactcccttcccagtgctgtg
tgtgtaggcagcagcgtgtgttcccggagaaacctgcgtcagtttccggtgccatcgcgg
agtcttcctgcgcccaggctcggcctgctgggcaccgccggcctgctcacacacacacac
acacacacacacaccccacgcagttccaacaacacacccaccaacctgaagcagggcaga
cagggtctatggtttgctaacccgggcggcagtaacagcatgcccagtcgcacccacagt
tccgtgcagaggacgcgctcgctacccgtccacaccaacccacacaccatggccatgttc
cagcaggcagatctgcagattcctgtgacggagccagacatcaataatcgattggagtct
ctgtgccgcagtatgaccgaacacgctctggaagatggtgtcgatcggacgtccactatc
tga
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