Ictalurus furcatus (blue catfish): 128612417
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Entry
128612417 CDS
T09387
Symbol
syne3
Name
(RefSeq) nesprin-3 isoform X1
KO
K21761
nesprin-3
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128612417 (syne3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128612417 (syne3)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
128612417 (syne3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KASH
Pox_A11
Motif
Other DBs
NCBI-GeneID:
128612417
NCBI-ProteinID:
XP_053488541
LinkDB
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Position
9:complement(1197244..1220672)
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AA seq
1143 aa
AA seq
DB search
MTQQEQNEFRESWEDAHAWMQAVQERLKLNDNTEGPRAALEARLRETEKIHESEQEGRMK
MDVVLVAADALLKNGDEELKNQTHSKLKELKTLWEETSTYIVHCHSRIEWVWLHWSEYLK
AHEEFRMWLVKVQRVVEPDLELQLGLREKLWQVEHHRVICSDVKAQDPLLERLLDEASAL
HNRTQDPSVDEQAQNTLHEEYDHVRTRAEERLGLVQKVAEEHEQHQRRVRDFQTWLVSKT
EEVSRFTEIEDVSENRLQALQDLDASVAGEEETLLYIEGQAEAVKANTSPAGAELITEEV
GELRLAWQGLRLALVEIRTELKGSMDAEREYYTRREELAAGIEQLRALVRRMSRQLENKD
GERSEENMVAQWKSCTDARTVLSAEEPQVEQLKAQMKELYHFPYDSRELADELLTAVKEY
QSVKGRTFRLCSESETALKQLLQDPLRAFSPWSQQASQTLDTSTEVTDFSHIAVLVQNIE
KLLKDSVLLQERLSSLQVKADLLSAVFGEEKAQSLLEELGTDMRKREQLHSQLLQRRTRL
QELISTTKNFGDAHDSIHQKLVSIGDRFRASGGLQPDILAKKSQADQLKVIKKELEDCEA
HITALETLVSSSPANRTKFRRLYSDWKQLYKAVRTKVEESEEGILLHESFHEGLLNVEKW
LMIMRQKLESFRGPNGEWSVVNRQHEAERALGEFPAKELQLHRTEAQGQAVLLKTSEDGK
VHIQRDLRRLRESWMSLHALSLNLYRLVSGHVSELGASGELDSSVHSHRADDFLDGSGGS
TIRVGADGRSGFEDDLRISPGSRSARGPGGFEAFAKHGRSVTKHDDASQTEDGEFSPPDG
ILSPDPSENVHAVWREETRGRSASAADEADSIAIGRGFPRDGGHAHGAGAVGRSGSGNRG
RTREWVEDHSSGVEDVVVLSEGRSASDPKPSHTDVRPKQLSVFTHVADASAHGSRDVTQV
RERRPNWKSRRREFDAWLRKENEKLAGITNDQRVTSTKGLERRRNALKGLRSAIPWGQAQ
FQQLLRSWQTDAQTEDVELEELRYRWMLYKSKLKDAESVKAQLKLQDEGVQQEELVRSRK
QESCCGFLYRVCRVALPLQLLLLALLLFAFLLPMMDEGTSCSMSNNFARSFNIMLRYHGR
PPT
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcaggagcagaatgagttcagggagagttgggaggacgctcacgcctggatg
caggccgtccaggaaagacttaagctcaacgacaacaccgaaggtccccgagcggctctg
gaggcccgactgagagagacggagaaaatccacgagtcggagcaggagggccggatgaaa
atggacgtggtgctggtggccgcagacgctctcctcaagaacggagacgaggagctgaag
aaccagacgcactccaaacttaaagagctaaagactctgtgggaggagacgtccacctac
atcgtccactgccacagccgtatagagtgggtgtggctgcactggagtgagtacctgaag
gcccacgaggagttcaggatgtggctggtgaaggtgcagcgcgtggtggagcctgatctg
gagctgcagctgggtctgagggagaagctgtggcaggtggagcatcaccgcgtgatctgc
agcgacgtgaaggcccaggatccgctgctagagcgcctgctggacgaggcgtccgcgctt
cataaccgcacccaggaccccagcgtggacgagcaggctcagaacacactgcacgaggaa
tacgaccacgtccgcaccagggcggaggagaggctcggtctggtgcagaaggtcgcagag
gagcacgagcagcaccagaggcgcgttcgcgatttccaaacgtggttggtgtcgaaaaca
gaagaagtgagtcgtttcacagagatagaggacgtttcggagaatcgactgcaagccctg
caggacctggatgccagcgtggcgggcgaagaagagacattactgtacatcgaaggccag
gccgaggccgtgaaggccaacacgtcacctgcgggagccgagctaatcacggaggaggtg
ggagagctgcggctggcatggcaggggctgcggctggcgctggtggagatccgcaccgag
ctgaagggctccatggatgccgagagagagtactacacccggcgagaggagctggcagcg
ggcatcgagcagctccgagccctcgtgcgcagaatgagccggcagctggagaataaagat
ggagagaggagcgaggagaacatggtggctcagtggaagagctgtacagatgcgaggacg
gtcctctcggccgaggagcctcaggtcgagcagctcaaagctcagatgaaggagttatac
cacttcccgtatgattcccgagaacttgctgatgaattactgactgcggtgaaggagtac
cagagcgtgaaaggacgcacgttccggctctgctcggagagcgagacagctctgaagcag
ctcctacaggaccccctgcgtgcctttagtccgtggagccagcaggcatctcagacgctc
gacacctcgaccgaagtcactgacttctcccacatcgctgtgctcgtgcagaacatcgag
aagctgctgaaagacagcgtgctgctgcaggagaggctaagctcgctgcaggtgaaagct
gacctgctgagtgccgtgtttggcgaggagaaagcccagagcctgctggaggagctcggt
acagacatgaggaagagagagcagcttcacagccaacttctgcagaggagaactcgactg
caggaattaatatcgacgacaaagaacttcggtgacgctcacgactctattcatcagaag
ctcgtgtctataggcgacaggtttcgcgcttcaggcggacttcaaccggatattctcgct
aaaaagagccaggccgaccaacttaaggtcattaagaaagaactggaagactgcgaggct
cacatcaccgctctggagacgctcgtctcgtccagcccggctaacaggaccaagtttagg
cgtctctattccgactggaagcagctctataaagctgtccggacgaaggtggaagaaagt
gaggagggtattttgctgcacgagagcttccatgagggtctgctgaacgtggagaaatgg
ctgatgatcatgaggcagaagctggagtcgttccgaggaccgaacggagagtggagcgtg
gtgaaccgacagcatgaagcagagagggcgctgggcgagtttccagcaaaggagctgcag
ctgcacaggaccgaagcgcagggtcaagccgtgctgctgaaaacctccgaggacggcaag
gttcacattcagcgtgacctcaggcgcctgcgtgagtcctggatgtcgctccacgcgctc
agtctgaatctgtacagactcgtgagtggacacgtgtctgagctcggtgcttcaggagaa
ctcgactcttcagtacactcgcaccgtgcagacgacttcctggacggaagcggcggatcc
acgatccgagtcggagcagacggccgctcgggattcgaggacgaccttcggatttctccg
ggctcgcggtcggccagaggtccaggaggattcgaggctttcgccaaacatgggagatcc
gtaaccaaacacgacgatgcgtctcaaaccgaggacggagagttcagtcctccagacgga
atcctatctcctgatccgtccgagaacgtccacgcagtctggagagaggaaacgagaggc
cgttccgcatccgcagccgacgaagcggactcgatcgccattggacgaggatttccgcga
gacggaggacacgcccacggggcaggagcggtcgggagaagtggatccgggaatcgaggg
agaacaagggaatgggttgaagaccactcgtccggagtggaagacgttgtggtgctgagc
gaaggccggagtgcaagcgatccaaaaccctcgcatacagatgttcgaccaaaacagctg
tctgtgtttacgcacgtcgcggacgcttcagctcacggctccagagacgtcactcaggtg
agagagcgcagacccaactggaaatcgcgcaggagagagtttgacgcctggctgcgtaaa
gagaacgagaaactcgcagggattacaaacgaccaaagagtgacgagtaccaaaggactg
gagagaagacggaacgcactcaagggtctgcgttccgccattccgtggggtcaggctcag
ttccagcagctactgcgctcctggcagaccgacgcacagaccgaggacgtggaactggag
gagcttcgctacagatggatgctttataaatccaaactgaaggacgctgaaagtgttaaa
gctcagctcaaactccaggatgaaggagtccagcaggaggagcttgttcgatccagaaag
caggagagctgctgtgggttcctgtaccgtgtgtgtcgtgtggctcttcctctgcagctg
ctgctcctcgcgctgctgctgttcgccttcctcctgcccatgatggacgagggcacgagc
tgctcgatgtccaacaacttcgcccgctcgttcaacatcatgctgcgctaccatggccgt
ccgcccacctaa
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