KEGG   Ictalurus furcatus (blue catfish): 128612417
Entry
128612417         CDS       T09387                                 
Symbol
syne3
Name
(RefSeq) nesprin-3 isoform X1
  KO
K21761  nesprin-3
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128612417 (syne3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ifu03036]
    128612417 (syne3)
Chromosome and associated proteins [BR:ifu03036]
 Eukaryotic type
  Centrosome formation proteins
   LINC complex
    128612417 (syne3)
SSDB
Motif
Pfam: KASH Pox_A11
Other DBs
NCBI-GeneID: 128612417
NCBI-ProteinID: XP_053488541
LinkDB
Position
9:complement(1197244..1220672)
AA seq 1143 aa
MTQQEQNEFRESWEDAHAWMQAVQERLKLNDNTEGPRAALEARLRETEKIHESEQEGRMK
MDVVLVAADALLKNGDEELKNQTHSKLKELKTLWEETSTYIVHCHSRIEWVWLHWSEYLK
AHEEFRMWLVKVQRVVEPDLELQLGLREKLWQVEHHRVICSDVKAQDPLLERLLDEASAL
HNRTQDPSVDEQAQNTLHEEYDHVRTRAEERLGLVQKVAEEHEQHQRRVRDFQTWLVSKT
EEVSRFTEIEDVSENRLQALQDLDASVAGEEETLLYIEGQAEAVKANTSPAGAELITEEV
GELRLAWQGLRLALVEIRTELKGSMDAEREYYTRREELAAGIEQLRALVRRMSRQLENKD
GERSEENMVAQWKSCTDARTVLSAEEPQVEQLKAQMKELYHFPYDSRELADELLTAVKEY
QSVKGRTFRLCSESETALKQLLQDPLRAFSPWSQQASQTLDTSTEVTDFSHIAVLVQNIE
KLLKDSVLLQERLSSLQVKADLLSAVFGEEKAQSLLEELGTDMRKREQLHSQLLQRRTRL
QELISTTKNFGDAHDSIHQKLVSIGDRFRASGGLQPDILAKKSQADQLKVIKKELEDCEA
HITALETLVSSSPANRTKFRRLYSDWKQLYKAVRTKVEESEEGILLHESFHEGLLNVEKW
LMIMRQKLESFRGPNGEWSVVNRQHEAERALGEFPAKELQLHRTEAQGQAVLLKTSEDGK
VHIQRDLRRLRESWMSLHALSLNLYRLVSGHVSELGASGELDSSVHSHRADDFLDGSGGS
TIRVGADGRSGFEDDLRISPGSRSARGPGGFEAFAKHGRSVTKHDDASQTEDGEFSPPDG
ILSPDPSENVHAVWREETRGRSASAADEADSIAIGRGFPRDGGHAHGAGAVGRSGSGNRG
RTREWVEDHSSGVEDVVVLSEGRSASDPKPSHTDVRPKQLSVFTHVADASAHGSRDVTQV
RERRPNWKSRRREFDAWLRKENEKLAGITNDQRVTSTKGLERRRNALKGLRSAIPWGQAQ
FQQLLRSWQTDAQTEDVELEELRYRWMLYKSKLKDAESVKAQLKLQDEGVQQEELVRSRK
QESCCGFLYRVCRVALPLQLLLLALLLFAFLLPMMDEGTSCSMSNNFARSFNIMLRYHGR
PPT
NT seq 3432 nt   +upstreamnt  +downstreamnt
atgacccagcaggagcagaatgagttcagggagagttgggaggacgctcacgcctggatg
caggccgtccaggaaagacttaagctcaacgacaacaccgaaggtccccgagcggctctg
gaggcccgactgagagagacggagaaaatccacgagtcggagcaggagggccggatgaaa
atggacgtggtgctggtggccgcagacgctctcctcaagaacggagacgaggagctgaag
aaccagacgcactccaaacttaaagagctaaagactctgtgggaggagacgtccacctac
atcgtccactgccacagccgtatagagtgggtgtggctgcactggagtgagtacctgaag
gcccacgaggagttcaggatgtggctggtgaaggtgcagcgcgtggtggagcctgatctg
gagctgcagctgggtctgagggagaagctgtggcaggtggagcatcaccgcgtgatctgc
agcgacgtgaaggcccaggatccgctgctagagcgcctgctggacgaggcgtccgcgctt
cataaccgcacccaggaccccagcgtggacgagcaggctcagaacacactgcacgaggaa
tacgaccacgtccgcaccagggcggaggagaggctcggtctggtgcagaaggtcgcagag
gagcacgagcagcaccagaggcgcgttcgcgatttccaaacgtggttggtgtcgaaaaca
gaagaagtgagtcgtttcacagagatagaggacgtttcggagaatcgactgcaagccctg
caggacctggatgccagcgtggcgggcgaagaagagacattactgtacatcgaaggccag
gccgaggccgtgaaggccaacacgtcacctgcgggagccgagctaatcacggaggaggtg
ggagagctgcggctggcatggcaggggctgcggctggcgctggtggagatccgcaccgag
ctgaagggctccatggatgccgagagagagtactacacccggcgagaggagctggcagcg
ggcatcgagcagctccgagccctcgtgcgcagaatgagccggcagctggagaataaagat
ggagagaggagcgaggagaacatggtggctcagtggaagagctgtacagatgcgaggacg
gtcctctcggccgaggagcctcaggtcgagcagctcaaagctcagatgaaggagttatac
cacttcccgtatgattcccgagaacttgctgatgaattactgactgcggtgaaggagtac
cagagcgtgaaaggacgcacgttccggctctgctcggagagcgagacagctctgaagcag
ctcctacaggaccccctgcgtgcctttagtccgtggagccagcaggcatctcagacgctc
gacacctcgaccgaagtcactgacttctcccacatcgctgtgctcgtgcagaacatcgag
aagctgctgaaagacagcgtgctgctgcaggagaggctaagctcgctgcaggtgaaagct
gacctgctgagtgccgtgtttggcgaggagaaagcccagagcctgctggaggagctcggt
acagacatgaggaagagagagcagcttcacagccaacttctgcagaggagaactcgactg
caggaattaatatcgacgacaaagaacttcggtgacgctcacgactctattcatcagaag
ctcgtgtctataggcgacaggtttcgcgcttcaggcggacttcaaccggatattctcgct
aaaaagagccaggccgaccaacttaaggtcattaagaaagaactggaagactgcgaggct
cacatcaccgctctggagacgctcgtctcgtccagcccggctaacaggaccaagtttagg
cgtctctattccgactggaagcagctctataaagctgtccggacgaaggtggaagaaagt
gaggagggtattttgctgcacgagagcttccatgagggtctgctgaacgtggagaaatgg
ctgatgatcatgaggcagaagctggagtcgttccgaggaccgaacggagagtggagcgtg
gtgaaccgacagcatgaagcagagagggcgctgggcgagtttccagcaaaggagctgcag
ctgcacaggaccgaagcgcagggtcaagccgtgctgctgaaaacctccgaggacggcaag
gttcacattcagcgtgacctcaggcgcctgcgtgagtcctggatgtcgctccacgcgctc
agtctgaatctgtacagactcgtgagtggacacgtgtctgagctcggtgcttcaggagaa
ctcgactcttcagtacactcgcaccgtgcagacgacttcctggacggaagcggcggatcc
acgatccgagtcggagcagacggccgctcgggattcgaggacgaccttcggatttctccg
ggctcgcggtcggccagaggtccaggaggattcgaggctttcgccaaacatgggagatcc
gtaaccaaacacgacgatgcgtctcaaaccgaggacggagagttcagtcctccagacgga
atcctatctcctgatccgtccgagaacgtccacgcagtctggagagaggaaacgagaggc
cgttccgcatccgcagccgacgaagcggactcgatcgccattggacgaggatttccgcga
gacggaggacacgcccacggggcaggagcggtcgggagaagtggatccgggaatcgaggg
agaacaagggaatgggttgaagaccactcgtccggagtggaagacgttgtggtgctgagc
gaaggccggagtgcaagcgatccaaaaccctcgcatacagatgttcgaccaaaacagctg
tctgtgtttacgcacgtcgcggacgcttcagctcacggctccagagacgtcactcaggtg
agagagcgcagacccaactggaaatcgcgcaggagagagtttgacgcctggctgcgtaaa
gagaacgagaaactcgcagggattacaaacgaccaaagagtgacgagtaccaaaggactg
gagagaagacggaacgcactcaagggtctgcgttccgccattccgtggggtcaggctcag
ttccagcagctactgcgctcctggcagaccgacgcacagaccgaggacgtggaactggag
gagcttcgctacagatggatgctttataaatccaaactgaaggacgctgaaagtgttaaa
gctcagctcaaactccaggatgaaggagtccagcaggaggagcttgttcgatccagaaag
caggagagctgctgtgggttcctgtaccgtgtgtgtcgtgtggctcttcctctgcagctg
ctgctcctcgcgctgctgctgttcgccttcctcctgcccatgatggacgagggcacgagc
tgctcgatgtccaacaacttcgcccgctcgttcaacatcatgctgcgctaccatggccgt
ccgcccacctaa

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