Ictalurus furcatus (blue catfish): 128612576
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Entry
128612576 CDS
T09387
Symbol
rp1l1a
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ifu03037
]
128612576 (rp1l1a)
04812 Cytoskeleton proteins [BR:
ifu04812
]
128612576 (rp1l1a)
Cilium and associated proteins [BR:
ifu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128612576 (rp1l1a)
Cytoskeleton proteins [BR:
ifu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
128612576 (rp1l1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
128612576
NCBI-ProteinID:
XP_053488850
LinkDB
All DBs
Position
9:complement(18778534..18787186)
Genome browser
AA seq
2496 aa
AA seq
DB search
MQSAGFSNASYQIRNDSLSHFSSVTTATPAKRITFYKSGDTQFNGITMPINKRSFKCFDA
LLDDLSQKMPLPFGVRTITTPRGTRAIQSLEQLQDGACYLCSDRHYVKPIDMEAAGKRPA
VWHHNYPLNTPRKPSRPEQPPAGYSGHHYHRQAKRIVLVKNYDPAVRRSIVLSRKRARSL
RAFMDEVSELMQCNVRKLYTLEGRKIDSMQSLMQCPSVLVCVGREPFKPLLLENLRKNSE
EKLPGIGARSHSSIFSEGHDGKKNVNFGLETKKSIIHPRSDSSNKSTRFSLSSEKSYPNG
SGMTPRQLGCVTKEVLMNDDIEKRVFVNKDGSLSVEMKVRFRLVNDETLQWSTEIKKLPT
STNECSSLEEGDPHCFQGKVVYSEPESNTECEAEDACSPKCHQMDFIGSYCHNCHNHSQG
YDIWKNPLHKDDGTSGTRSSSNSAGSSDKIMHQKASVDSVYTVSRSSEEYTEHVVKKASC
FQQTIEEGDTRIEYCSISRCCSRNEVSTSTTKCNIPSDTCESNTGKIYHHNDNRKTDYVE
LDHLSKVTKAAEHLISATSNSSIIQSFKNDEGDYYEDLSPRIARASQWCSEQDKQFTCVH
CNGSQQSHNLQSSSIPPKVSSCSADAVKSKMSNSMYAAPEVPQEGHADTDSRDSARSSVS
KVSSRSQCCCCSQCIEAITGLMESDMKNGLKEEVLNSMSDDSKVSNKSRARANSPRRVIS
DSGADKACKEETKSGNKSITAMSTNTCFSVMSTVCPCCGGCGRLSTLPANIQDMPVQVAE
EDSEVKSLHERSSKARGSERSNKCTHCEPQRDYAISNILENTEPVQNNIAEEEVRHASSQ
SALFDLSNNSAASKKSNNSNQHACGRSSIAEMISENAGVEDVEGRTESARSIKSIRTEKS
NSDIPDVVTISGLKNQIDEEIGVLYMAKENIPEIDTVMQASDMDTKERVPSAMSIKTHSS
KDSDKSHKSNNIQDTATASPPVSTSPITDTPYEKIHSQRSTTELSKSAKVSVKSNACSER
DLESLLNPNDMTAGQDTRQTTDDAKCNAQKSLLVTSPSPKSPITIGNNNQALSVKSGHSK
ASSKSTRSNKRHYTSSRCVQRVANSPSGKSKSTMSPTPASHGLLDEPLSPTSTASVSLGL
GAEERSEDLNERSMSNISQIFDEPKCLSEKYCPEPSALDHAVHNSVITETKERVKTTVSI
CSSVWDKSKLSNVMQDSCKNPVVILGTESECIISAKSKTESKVAAQLLQNDGDHSVPSAL
SVSSEKSQQNSHSKNTATIKMYTHGTQAINTNTNKGETNKALTISGSSSKSSQNKITSGK
AYTHGAATSDQCTTQSKERSFSNLELKEARKTDSNNAESGISLKTSKSDKKPPSRNKYVT
KSELSENCTTPDSKGDSVLPHSPDLVREKDMDAKPDSRGSRSNTSDKNYVLEEMQHIDSN
CKITSFKQKKISSTSQERAEDHTKEALMPSCLPNASPTDVVTDWLKNIPIDGPMYDMEEE
FSEQHDETLLQIPAVKEEGYFPNEIEEQSEKSMTMKESQEVCGSEGADPVTEDKNTICDV
TLACNETFQTTAANSDCNHLSPKLSKREGLTNNCQSSIQVMKVLLSPKLDRCNSLPEVSP
TYGRKLSTSAKGLLDCLANLQVIDPDPKIYDKYSEIISTLQSLWINRPSETVQDKHEIKV
HSAEDEFNPRSSSGVDVSSGSIGSGKGSISGGLEKSEATQGRTTLIAEQKAFPQIQGDAP
IGGGCDSLSATPENINTSPVSSDPVTPDIAERVRCSPEHEKLKKEAQKDEGLKATDDVVQ
ANEHIKDLKEIASTFSMTTSENNGNVKSVSDKELNQPENNNSRTLPSDQKGQLTKRISQD
PDPVWVLSLLKKLETQFMSHYANAIAEFKVRWDLDDNETLDIMISELKEEVHKRIQSTIK
RELQKIQSRAGRTPKPPISMLSRDSTVQTEQRRRRLKVMQNKFYNLSRSEDINTASGTEF
SDQRSEDEYCPCDTCVKKKMASRVVQCTKALSVAPVLKDFDLRQILQAKKDPHVAMPVQF
KVNEQKDQIKGTDSSLDQDKNNLEVVNEEAKVHIIKSQIGEDDILMEEETKDEIITEHGI
QACDNEDKDVGVINNGGWRKLKEGPSDDEDDGQPAEEKMFDNNTDGADDGESKPERERHE
VGEDLEYKSKGNKDTEVMNREDEEAEEATEGDTTADVEVAMETDPADEVDAERKEAESSE
IEEGEGNPVEEKESNDERAEEAVSEGETNKESETGDAEEERDETEENAEIPEEGEETKNR
TGEETQSAKEGKTSRDESGEAENSNATSDERTQDDVPAAVAEAKPRKNEIGEIIESEKTE
EDGTTRKSKANMSTENSADENQSESPEAENEVEKESHETNDRIYIQKPSKKKDGKYVAGQ
LVSEEDDGDQADMDDCGTDEKSQTDMRAESIENQAEDPDLPSPICGDDSDCKLISQITKT
SIESQTGSLEYSKNMTVKEKLRDIVSFMESLNDQDS
NT seq
7491 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtgcaggcttctccaatgcaagctaccagattaggaatgattccttgtctcat
ttctccagtgtgaccactgccaccccagccaagagaatcactttctacaagagtggagac
acccagttcaatggtatcacgatgcccattaataagcgaagtttcaaatgctttgatgcc
ttgctggatgacctttctcagaaaatgcctttgccatttggtgtgcggacgatcactaca
cccagaggaactcgtgctattcagagtctggagcagttacaggatggggcctgctacctg
tgctctgatcgccactacgttaagccaatcgatatggaggctgcagggaaacgacctgct
gtctggcatcacaattacccacttaacaccccaagaaagccttcccgacctgaacagcca
cctgcgggatattctggccatcactaccatcgacaagcaaagaggattgtgctggtaaaa
aactatgatcctgcagtgagaaggtccattgttttgagcagaaagagggctcgaagcctt
cgtgcctttatggatgaggtttcagaactcatgcagtgcaatgtcaggaagctatacacc
ttggaaggacgaaagattgatagtatgcagagcctgatgcaatgtcccagtgtgctggtg
tgtgtgggccgagaacccttcaagcccctacttctggagaatctgagaaagaactcagag
gagaagttgcctgggataggtgcaaggtcacactctagcatcttcagcgagggccatgat
ggcaagaaaaatgtgaactttggacttgagaccaagaaaagtatcatccatccaaggtca
gattcaagtaacaaatctacaaggttctccctatcatcagaaaaatcttacccaaatgga
tcaggcatgacaccaaggcaactgggttgtgttacaaaggaagttttaatgaatgatgac
attgaaaaaagggttttcgtcaacaaagatggcagtctgtctgtagaaatgaaagttcgg
ttccgcctagtcaatgatgaaactcttcagtggtccactgaaatcaagaagttgccaaca
tctacaaatgaatgtagttctctagaggagggagaccctcattgttttcaagggaaagtt
gtatactctgaaccagagtccaacactgaatgtgaggctgaggatgcctgttcaccaaaa
tgtcatcaaatggactttataggatcctactgtcacaattgccacaaccatagtcaaggg
tatgacatttggaaaaaccccttacacaaggatgatggaaccagtggaaccaggagttcc
tctaattctgcgggatcatccgacaaaattatgcaccaaaaagcatctgtggacagtgtg
tatacagtttccaggtcgagtgaggaatatactgaacatgttgtaaagaaggcatcttgc
ttccaacagactattgaggagggggacacaaggattgaatattgctcaataagtcgttgt
tgcagtcggaatgaggtgtcaaccagcaccacaaagtgtaatatacccagtgacacatgt
gagagtaatactgggaaaatatatcaccataatgataatagaaaaacagattatgtggaa
ttggatcatttgagcaaagtcacaaaagcagcagaacatttgatttctgctaccagcaat
tcatccatcatccagtcattcaaaaacgatgagggtgattattatgaagacctttcccca
agaattgcaagagcatctcagtggtgttctgagcaggataaacagtttacatgtgtacac
tgcaatggcagtcaacagtcgcacaatttacaatcttcctccataccacctaaagtctca
agctgctctgctgatgcagtaaaatccaaaatgtccaacagcatgtatgcagcaccagaa
gtgccccaggagggtcatgcagacactgatagtagggacagtgccagatcttcagtttca
aaagtgtcctcaaggtctcaatgctgctgctgcagccaatgcatagaagcaataacaggc
ttgatggaatctgatatgaagaatggtttaaaggaagaggttctgaattcaatgtcggat
gacagcaaagtgtctaataaatctcgagcaagagcaaattcaccaagaagagtgatatca
gacagtggtgctgacaaagcatgcaaggaggaaacaaagagtgggaataaatctataact
gccatgtcgacaaacacatgtttctcagtgatgtccacagtatgcccttgttgtggtggc
tgtggaagattatcaacactaccagcaaatattcaggatatgccagtccaggtagctgag
gaagatagtgaagttaagtcacttcacgagagatcatctaaggcacgtgggtctgagaga
tctaacaaatgcacacattgtgaaccacaaagagattatgctatttcaaacatacttgag
aatactgaacctgttcaaaataatatagctgaggaggaggtcaggcatgccagctcccaa
agtgcattgtttgatttatcaaataattctgctgcttcaaaaaaatccaataattcaaac
cagcatgcatgtgggagatcatctattgcagaaatgatttctgaaaatgctggagtggag
gatgtagaaggaaggaccgaaagtgccaggtcaattaaatcaattagaacagaaaagtca
aacagtgacataccagatgtagtaacaatatctggactaaagaatcaaattgatgaggaa
attggggttttgtatatggccaaggaaaatataccagaaatagacactgtaatgcaagct
tctgatatggacactaaagaaagagtccctagcgcaatgtcaattaaaacacactcttct
aaagattctgacaagtcccacaaatcaaacaacattcaagacactgcaactgcctcacca
ccagtttctacaagccctattacagacacaccttatgaaaaaatacattcacagaggtca
acaactgaactgtccaagagtgccaaagtttctgtgaaatcaaatgcatgctcagagaga
gatttagagtcattgttgaatcccaatgatatgactgcagggcaagacactagacaaaca
acagatgatgcaaagtgtaatgcacagaaatccttactagtgacctctccatcaccaaag
tcaccaattacgatcggaaataataatcaggcattaagtgtaaaatctggtcattctaaa
gcatcttcaaaatcaacaagatctaacaaacgtcactacacttcaagcagatgtgttcaa
agagtggcaaatagtccctcaggaaaatccaaatctacaatgtctcccactccagcctcg
catggcctgctagatgaaccattaagtccaacatcaacagcttctgtttctcttggactt
ggtgcagaagagaggtctgaggacctcaatgaacgatccatgagcaacatatcacaaatc
tttgatgaacctaaatgtttgtcagagaaatattgccctgaaccctctgcactagatcat
gctgttcacaattcagtaataacagaaacaaaagagagggtcaaaacaactgtgtctata
tgttcttcagtttgggataagtcaaaattgtctaatgttatgcaagattcatgcaagaat
cctgtagttatcttgggaactgaatctgaatgcatcatatcagccaaatcaaagacagaa
agcaaggtagcggcccagcttttacagaatgatggtgatcatagcgtgccatctgcattg
tcagtgtcatcagagaaatcacagcagaactcacacagtaaaaacactgcaaccataaaa
atgtatacacatggtactcaagcaatcaatacaaatacaaataagggtgagacaaacaaa
gctttaacaatatctggaagttcttcaaaatccagtcaaaataaaataacctcggggaag
gcttacacccacggagctgctacatcggatcaatgtactacacagagcaaggaaagatcc
ttctcaaaccttgaactaaaagaagccaggaaaactgattctaacaatgctgaaagtggt
atttctttaaaaacatcaaaatcagacaagaaacctccatccaggaataaatatgtcact
aagtctgaattgtcagaaaactgcaccactccagattctaaaggtgatagtgttttgcct
cacagtccagatctagtaagggaaaaggatatggatgcaaaaccagacagtagaggatca
agatcaaacacatcagacaaaaactatgtccttgaagagatgcagcatattgacagtaac
tgtaaaataaccagctttaaacaaaagaaaattagcagcacatcacaggaaagagctgag
gatcatactaaggaagcattgatgccatcttgtttacctaatgcatctcctacagatgtt
gtaacggactggcttaaaaatataccaattgatggtcctatgtatgacatggaggaagaa
ttcagtgagcaacatgatgaaactctccttcaaatacctgctgtgaaagaagaaggatat
tttccaaatgaaattgaagaacagtctgaaaagtcaatgacaatgaaagaatctcaagaa
gtatgtgggtctgaaggtgcagatcctgttacagaagataaaaataccatctgtgatgta
acactagcatgtaatgagacatttcaaacaactgcagccaacagtgattgcaatcatctc
agtccaaaattaagtaagagagagggtttaacaaataattgtcagtcctcgatacaggtc
atgaaggtcctcttaagccccaaattggacagatgcaatagtttgcctgaagtttcacca
acatatgggagaaaattaagcacatcagccaaaggactactagactgccttgctaattta
caagtgattgacccagatccaaagatatatgacaaatatagtgaaattataagcactctc
cagtcactatggattaacaggccctctgaaactgtgcaagataagcatgaaataaaagtt
cattcagcagaggatgagtttaacccgaggtcgtcttcaggggtagatgtaagcagtggt
tccatagggtctggtaaaggaagcatcagtggtgggcttgaaaaatcagaagcaacacaa
ggcagaacaacattaattgctgaacagaaggccttcccacagattcaaggagatgcacct
attgggggtggatgtgactctttatctgctacaccagaaaacataaatacttcacctgtc
tcttcagatcctgtaactccagacattgctgagagggtccgatgcagtcccgaacatgaa
aaactaaagaaggaagcacaaaaagatgaaggccttaaagccacagacgatgttgttcag
gctaatgaacatataaaagatcttaaggaaatagcttcaacattctccatgacgacctct
gagaataatggaaatgttaaatcagtgtctgataaagaactaaatcaaccagaaaataac
aactcaagaacactaccatcagatcagaaaggtcagttaactaagagaatttcacaagac
ccagatccagtctgggttttgagcttgttaaagaaactggaaacacaatttatgtctcac
tatgcaaatgcaatagcagagttcaaagtacggtgggatttagatgacaatgagacactt
gatataatgatcagtgaacttaaagaagaggttcataaacggattcagtctactataaaa
cgagagctccaaaaaatccaaagtcgagctggtagaacaccaaaaccaccaataagcatg
ctttctagagattctacagtccaaactgagcaacggcgaagacgtcttaaagttatgcag
aataaattttataacctttcaagaagtgaagacataaacactgcttcaggtactgaattc
agtgaccagcgcagtgaagatgaatattgtccatgtgacacatgtgtgaaaaagaagatg
gcatcaagagttgtccagtgtactaaagctttgagcgtggctccagttcttaaggatttt
gatcttaggcaaatcttgcaagcaaagaaggatccccatgttgctatgccagtacagttc
aaagtgaatgaacaaaaagatcagattaagggtactgatagtagccttgaccaagataaa
aataatttagaagtggttaatgaggaggccaaagtacatattataaaaagccaaataggc
gaagatgatattcttatggaggaggagactaaggatgaaatcataacagagcatgggatt
caggcctgtgacaatgaagataaagatgtaggggtaataaataatggaggatggaggaaa
ctgaaggaaggaccatctgatgatgaagatgatgggcagccagctgaagagaaaatgttt
gataataacactgatggagcagatgatggcgaaagcaaaccagagagggaaagacatgaa
gtgggagaggatttggagtacaagagcaaaggtaacaaggacacggaagtaatgaataga
gaagatgaagaggcagaagaggcaacagagggagatacaacagcagatgtagaggtagca
atggaaacagatccagctgatgaagtagatgcagaaagaaaagaagcagaaagcagtgaa
attgaagagggagaagggaatccagtggaggaaaaggaatcaaatgatgaaagagctgaa
gaggcggtgtctgaaggggaaacaaataaagagagtgaaactggggatgctgaagaggaa
agagacgagactgaagagaatgcagagataccagaagaaggtgaggaaacaaaaaataga
acaggagaagaaacacaatcagccaaagaaggcaagacatccagggatgaatcaggagag
gctgagaatagtaatgcgacaagtgatgagcgaacacaagatgatgtgcctgctgctgta
gctgaagctaagcctagaaaaaatgaaataggtgaaatcatagaaagtgagaaaacagag
gaagatggtaccacaagaaagagtaaagctaatatgtccactgaaaatagtgcagatgaa
aatcaaagtgaatctcctgaggcagaaaatgaggttgaaaaggaatcacatgagaccaat
gataggatatatattcagaagccaagcaaaaagaaagatggtaaatatgtagcaggacag
ctggtctctgaggaggatgatggtgaccaggcagacatggatgattgtggaactgatgaa
aagagtcaaactgacatgagagcagagagtattgagaaccaagcagaggatcctgatctt
ccaagtccaatctgtggtgacgattctgactgtaaacttattagccagataacaaaaaca
tcaattgaatcccaaacaggatcactggaatactccaaaaatatgacagtgaaagaaaag
ctaagggacattgtgagttttatggaaagtttgaatgatcaagattcatag
DBGET
integrated database retrieval system
