KEGG   Ictalurus furcatus (blue catfish): 128612592
Entry
128612592         CDS       T09387                                 
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    128612592 (wdr43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ifu03009]
    128612592 (wdr43)
Ribosome biogenesis [BR:ifu03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    128612592 (wdr43)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 Utp12 Beta-prop_THOC3 WD40_CDC20-Fz WD40 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML_2 WDR55 Beta-prop_WDR36-Utp21_2nd DSE1_N Beta-prop_VPS8 WD40_Gbeta Beta-prop_TEP1_2nd WDR90_beta-prop_4th Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st EIF3I Beta-prop_RIG_2nd Beta-prop_Aladin ASA1 Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_ACSF4 Beta-prop_WDR19_1st Beta-prop_NOL10_N Beta-prop_RSE1_2nd Beta-prop_Nup120_160 Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_SPT8 WD40_2 Beta-prop_WDR75_2nd Beta-prop_SCAP Nol11_C Beta-prop_RIG_1st Tricorn_2nd Paf1 PFF1_TM
Other DBs
NCBI-GeneID: 128612592
NCBI-ProteinID: XP_053488869
LinkDB
Position
9:28299751..28313503
AA seq 669 aa
MAADGGCAAAPSSSAPTLPCSFSPNSRHYLAVCAQDGRLRVWNADSRALHREYVPSAHLS
ATCTCIAWGPCRATKEGPQRKKRKSEAGPASAQQSDLLALGTAAGTVLIYSTVKGDLHCT
LDGVHNGSVNSVQWHPKESVLYSGSDDTHIAEWDLKTGKTLCKWKADRAAVTSLCVSPDG
KLLLTAGMTIKMWDLETKEVYRKFTGHSTTVTTLCFATTRPPDSDGLYFLSGAAHDRLLS
VWQVRSDGKDKNSVVSFTLTDEPQHIDLQISNRKDEAVRLAVVCKDGQLHLFEHFLNGPC
KKPLSPVCSVQVSSGSSGEGTTPMPVSLLAAALCSDRQSVMLAYGSHLQPVMEKTSINTS
ERHVCLIRDVHTMLSLSVDAAVTKVKTPIVNEKKSKVLIPGLPGHQAPIKATPSQSEKRK
KGTVPTEMSIEERLEQIELSASRGKGQSKGASDSLQTDGFAVLLVQGLESKDEKILNKIF
QSRKEAMIKNTVARLPLSAVLPLVEELTRRLHGNPFTAILIMQWLKAVLTQHTAYLSSLP
DMVSQLGPLYHMIESRVKLYQQLMRLHGKLYLLMMQVATSNCSNTVTELSRTANLVYEEE
SSDEEADSGDEGRPEEDSDSWEEEEEDDKEEGMDVAEDKENHADESDEGGKDESKANGDS
DLDAESEEE
NT seq 2010 nt   +upstreamnt  +downstreamnt
atggcggccgacggaggctgtgctgctgctccttcttcttcagcgccgacgctgccgtgc
tccttctcgccgaactcgcggcattacctcgccgtgtgcgcgcaggacgggcggctacgg
gtctggaacgccgactcgcgcgcgctccaccgcgagtacgtgccttccgcgcacctcagc
gccacttgtacttgcatcgcctggggaccatgccgagcgaccaaggaggggcctcagagg
aagaagaggaagtcggaggcgggtccggcgtcggctcagcagtcggatctgttggctctg
ggtacggcagccggtaccgtcctcatctacagcacggtgaagggagatctccactgtact
ctggacggagtgcataacggaagtgtgaacagcgtccagtggcaccctaaagaatctgtc
ctgtacagcggctcagacgatacacacatcgccgagtgggacctgaagacgggaaaaaca
ctctgtaaatggaaagcggatagagcggcggtaacgagtctgtgtgtgagtcctgacggg
aaactcctgctcaccgccggaatgaccatcaaaatgtgggacctggagaccaaggaggtg
tacaggaagttcacaggtcactcgaccacggtaacgaccctgtgcttcgccacgacccga
cctccggacagcgacggcctctacttcctgtccggggcggctcacgacagactgctcagt
gtgtggcaggtacgctctgacggcaaagacaagaactcggtggtatcgttcacgctgacg
gacgaaccccaacacatcgacctgcagatctccaacaggaaagacgaggcggtgcggtta
gcggtggtgtgtaaggacgggcagctgcatctcttcgagcactttctcaacgggccgtgt
aagaagcccctgtccccagtgtgttcggtgcaggtgtcgagcggcagctctggtgaaggt
accaccccgatgcccgtctccctgctggctgccgctctgtgttcagacagacagagcgtc
atgctggcgtacggaagccacctacaacccgtcatggagaaaacgtccatcaacacgtca
gagaggcacgtgtgtctgatccgagacgtgcacacgatgctgtcgctttcagtcgacgct
gcagtcacgaaggtgaagacgcccatcgtgaacgaaaagaagagcaaagttttaataccg
ggacttcctgggcatcaagcgccaatcaaagccactcccagccaatcagaaaagaggaag
aaaggaaccgttcctacggagatgtcgatagaggagcggttggagcagatcgagctgagc
gcgtcacgtggtaagggacagagcaaaggcgcttcggattcgctccagacggacggcttc
gccgtgctgctcgttcagggcctcgagagcaaagacgagaagatcctcaacaaaatcttt
caatcgaggaaggaagccatgattaagaacacggtggcgcggttgcctctttcggctgtc
ctgcctctcgtggaggaactgacgagaaggctgcatggaaacccgttcacggcgattctg
atcatgcagtggctgaaggccgtgctgacgcagcacacggcgtacttgtcatcgctccca
gacatggtgtctcagctggggccgctctaccacatgatcgagagccgggtgaagctgtac
cagcagctgatgagactccacggcaagctctacctgctcatgatgcaggtggcgacaagc
aactgttccaacacagtaaccgagctgagccgcaccgccaatctggtgtacgaggaagag
tcctcggacgaagaggcagactctggagacgagggacgccctgaagaagactccgatagc
tgggaggaggaagaggaggacgacaaggaggaagggatggacgtagcggaggacaaagaa
aaccatgcggacgagagcgacgaaggcgggaaggacgagtccaaagcaaacggcgattca
gacttggacgctgagagcgaagaggaatga

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