Ictalurus furcatus (blue catfish): 128612608
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Entry
128612608 CDS
T09387
Symbol
psmc1a
Name
(RefSeq) proteasome 26S subunit, ATPase 1a
KO
K03062
26S proteasome regulatory subunit T2
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
128612608 (psmc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ifu03051
]
128612608 (psmc1a)
Proteasome [BR:
ifu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
128612608 (psmc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_22
AAA_2
DUF815
nSTAND3
AAA_16
AAA_5
RuvB_N
AAA_3
AAA_28
AAA_25
ATPase
AAA_14
RNA_helicase
NPHP3_N
TIP49
NB-ARC
AAA_33
NACHT
IstB_IS21
Prot_ATP_ID_OB_N
Mg_chelatase
AAA_7
ABC_tran
Parvo_NS1
AAA_24
SLFN-g3_helicase
Zeta_toxin
TsaE
Motif
Other DBs
NCBI-GeneID:
128612608
NCBI-ProteinID:
XP_053488890
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All DBs
Position
9:16996963..17004743
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AA seq
440 aa
AA seq
DB search
MGQNQSGGHGPGGGKKDDKDKKKKYEPPIPTRVGKKKKKTKGPDAASKLPLVTPHTQCRL
KLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KRRIFQIHTSRMTLAADVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggacagaatcagagtggaggacatggccctggaggagggaagaaagatgataaagat
aagaaaaaaaaatatgagcccccaattcccacaagggtgggaaagaagaagaagaagacg
aaaggcccagacgctgcaagcaagcttcctttggtgactccacacacacaatgcagactg
aaactgctgaaacaggagaggatcaaggactatctgctgatggaggaggagttcatcagg
aaccaagagcaaatgaagccacttgaggaaaaacaggaggaggagaggtccaaagttgat
gacctgagaggcactcccatgtcagtaggaactcttgaagagatcattgatgataaccat
gccattgtctctacgtcagtgggctcggagcactatgtcagcattctctccttcgtggat
aaagaccttctggaaccaggctgttctgttttactgaatcacaaggtgcatgccgtgatc
ggtgtgctgatggatgacaccgatcctctggtgaccgtgatgaaagtggaaaaggctcct
caggagacatatgctgacattggaggcctggacaaccaaattcaagagatcaaggagtca
gttgagcttccacttacacacccagagtattacgaggagatgggaataaagcctcctaaa
ggagtcattctgtatggtgcaccagggacaggtaagaccctgttggctaaagctgtggcc
aatcagacatctgccacattcctgagggtggtgggttcagagctgattcagaaatacctg
ggcgatggtcccaaactagtccgagagcttttcagagttgcagaggagcatgccccctcc
atagtcttcattgatgagattgacgccataggaacaaaaaggtacgactccaactcaggt
ggagagagagagatccagaggaccatgctggagctcctgaaccaactggatggatttgac
tcccgtggtgacgtcaaagtaatcatggctactaatcggatagaaacacttgaccccgcc
ctcatccgtccaggtagaatcgaccgtaagattgagttcccactgcctgatgagaagacc
aagcgtagaatcttccagattcacaccagcaggatgactttggcagctgacgtaaccctc
gatgaccttatcctcgctaaagatgacctttctggcgctgacataaaggcgatttgcaca
gaagcagggcttatggccttgagggagaggaggatgaaagtaacaaatgaagacttcaag
aagtctaaagagaatgtgctctacaaaaaacaggaagggaccccagagggcctctacctt
taa
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