Ictalurus furcatus (blue catfish): 128612656
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Entry
128612656 CDS
T09387
Symbol
lrfn5a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
128612656 (lrfn5a)
Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128612656 (lrfn5a)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
I-set
Ig_3
LRR_4
LRR_1
ig
LRR_9
Ig_2
LRR_14
DHU1_N
fn3
C2-set_2
Sp38
Ig_DSCAM-DSCAML_C
C2-set_3
LRR_Zer-1
OAD_gamma
Ig_5
Motif
Other DBs
NCBI-GeneID:
128612656
NCBI-ProteinID:
XP_053488964
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Position
9:complement(3777276..3828796)
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AA seq
777 aa
AA seq
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MEKLLVCLLVIGMAVKAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRHTVELRLAD
NFVTSVKRKDFANMTRLVDLTLSRNTISYITPHAFTDLENLRALHLNHNRLTRIGNDTFS
GMSKLHHLILNNNQLTHIHLGAFNDLLALEELDLSYNNLETIPWEAIQRMISLHTLSLDH
NMIDYIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGVLTSSSFALSFGGN
PLHCNCELLWLRRLSREDDLETCATPAHLSGRYFWSIPEEEFLCEPPLITRHSQEMRVLE
GQRVTLRCKARGDPEPVIHWISPDGKLVSNSSRTIIYNNGTLDILISTVKDTGSFTCISS
NPAGEAHQTIELVIIKLPYISNSTNNIQEPDPGSSDISTSSRTGANGSNHTADSKASSDK
RVVIAEATSSTALIKFNFQRNIPGIRMFQIQYNGTYDDSLVYRMIPPTSKNFLVNNLAAG
TQYDLCVLAIYDDASTSLTATRVVGCVQFTTESEYLRCHFMQSQFLGGTMILIIGGIIVA
SVLVFIIILMIRYKVCMSSDRAKGTDATTRVQPDAAVSPMANKEGAVAPEGGDDCQKSSA
PGFPDSLTQSSETSLPDCSTETSVVSQSWDTGGSSGSIKPKRRPAPKPDEKTDPVLGAET
HNTNRNNSKTPLLRSVPPSGPAPLLPSRFRDTPILRRAPPRPCVSKYLTLPAEGTRAAPR
RYSLNEDFSKHHYYAGKPGNARCKRSVSMNGMLASVENSDMDKGVYSSSEWILESTV
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagctgctcgtctgcctgttggtcattggaatggcagtgaaggcccagatctgt
ccgaagcgctgcgtgtgccagattttatcgcccaaccttgcaacactttgcgctaaaaaa
gggcttctgtttgtgccacccaacatcgaccggcacacggtggagctacggcttgcggac
aacttcgtaactagcgtcaaacggaaagacttcgccaacatgaccagactcgtggacctc
accttgtcgaggaatacgataagttacattacgcctcacgcgttcacggacttggaaaac
cttcgcgccttgcacttgaaccataacaggctgactcggataggaaatgacacgtttagc
ggcatgtccaagctgcatcatctgattctcaataacaatcagttgactcacatccacctg
ggagcttttaatgaccttctggccttggaggagctggatttgtcctacaacaaccttgaa
acaataccctgggaggcaattcagaggatgatcagccttcatacactcagcttggaccac
aacatgattgattacattccagaaggcactttttccctgttacaaaaactcaaccgactg
gatgtgacctccaacaagctccagaagcttccaccggatcctcttttccaaagggcgcag
gttctggcaacatctggagtgctcacgtcttcatcgtttgccctgagttttggtggaaat
cctttgcactgcaattgcgagctgctctggcttcgccgactgagtcgtgaggacgatttg
gagacttgcgcgacccctgcacacttatccggacgatatttctggtctattccggaagag
gagttcctgtgtgagccaccgcttatcacgaggcactctcaagagatgagggtgctcgaa
ggtcaacgcgtaacccttcgatgcaaagcgagaggagatcctgaacccgtgatccactgg
atatcacctgacggcaagctggtctcgaactcctcgcgtaccatcatttacaataacggg
accttggatatcttgatcagcacggtcaaagatactggatccttcacttgtatctcttct
aacccagccggtgaagcccaccaaaccatcgagcttgtcattatcaagcttccgtacatc
agcaacagcaccaataacatccaggagccagatccgggctcgtcggatatatccacgtcc
agcagaaccggagccaacggaagtaaccacacagcagactcgaaagcgagctcagataag
cgtgtggtgatcgccgaggccacttcatccacagcgctcattaagtttaacttccaaagg
aatattcctgggattcgcatgtttcagatccagtacaatggcacctatgatgactctctt
gtttacagaatgattccaccgacgagcaaaaacttcctggtgaacaacctggcggccggg
actcagtacgatctctgcgtcctcgccatctacgacgacgccagcacgtccctcacggcc
acgcgcgtcgtgggctgcgttcagttcaccaccgagtccgagtacctccgctgccacttc
atgcagtcgcagttcctcggaggaaccatgatcctgatcatcggcggcatcatcgtcgcc
tccgttctggtcttcatcatcatcctcatgatccgttacaaggtgtgcatgagcagcgac
cgcgctaaaggaactgacgccaccaccagggtgcagcccgacgccgccgtcagtcccatg
gccaataaagagggcgcggtggctcccgagggtggcgacgactgccagaaaagctccgcc
cccggatttccggattccctcactcagtcgtcagagacttctcttcctgattgttccacc
gagacgtccgtcgtgagccagagttgggacacgggaggatcttcggggtccatcaaaccc
aaacggagaccggcgccgaagccggatgagaagaccgatccggtgctcggcgccgagacg
cacaacaccaaccgcaacaactcgaaaacaccactcctgcgttccgttccgccatcaggc
cccgcccctttgctgccttctcgcttcagggacacacccatcctgaggagggcgccgcct
cgtccctgcgtatcgaaatatctcacactgccggcagaggggacgcgagctgcaccgcgc
aggtactcgctaaacgaagacttttccaaacaccactactacgccggcaagcccgggaac
gctcggtgtaagcggagtgtatccatgaacggaatgctagccagcgtggaaaattcggat
atggataaaggggtgtattccagttcagagtggatcctagagagcacggtgtga
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