Ictalurus furcatus (blue catfish): 128612739
Help
Entry
128612739 CDS
T09387
Symbol
ubr1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128612739 (ubr1)
Enzymes [BR:
ifu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128612739 (ubr1)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
128612739 (ubr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
WHD_UBR1
zf-UBR
ClpS
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
128612739
NCBI-ProteinID:
XP_053489089
LinkDB
All DBs
Position
9:16504544..16525266
Genome browser
AA seq
1738 aa
AA seq
DB search
MAEGEKSVNALQLCTKWWEASDRQSAIRQHVAEKVPCIYCLQAESQQVEEEKRVQECILQ
PLEYFLFGEDPSVGLEKLQQRNGGSSSQLCGRVFKEGETVYSCRDCAIDPTCVLCMDCFQ
NSVHKNHRYKMHASLGGGFCDCGDLEAWKTGPCCSQHDSGTAIAMETDECVLEAALQERA
QMLFQALLQYVTDLMVWEEGDELPPEMEPRSKENMYYCVLYNDEHHSYDHVIYTLQRAIS
CNHSEAHAYTTFIDKEGRRAVKRGSLSSCQQAKELIRSSSEQITQQPLRVELIHSAVMAH
QTFALRLVTWFQQIIGYSVGFRQVFCQVALEPSADSSKLCLISRLMLRDARLYKGARKVI
HELIFCSLLMETEYKRQFAMKFTEHYKQLQEDFIRDDHERNISITALSVQIFTVPTLARQ
LIEEGNVIKVIIDTVMEMLREHLDSNQRFYFQGYNSDKFFRFQVIFRDLKYILISKPNIW
TEQLRGKFLEGFAVFLGFLNCMQGMEEVKRQISQHIEVEPEWEAGFTIQIHLRHILSMFQ
DWCASDERVLLLAFQECYRVLQRCTNQPFHSEPTDHYMCKHILHTRSYKVSQEPVSIHLP
ITRLLAGLYVLLCRTGAVIHLPDFMDPEQIDLPFFAEFPLRCVVLAAQVSAEMWRRNGLS
LVNQVYYYQDVKCRDEMFDKDIIMLQIAASKMDPNHFVMLILLRFELFEVFNGNCSSKDQ
DLQKQWNRLTEEMLFLLIIITGERYVPGISNVTKEDVTMREVIHLLCIEPMAHSSMVKSL
PENENQETGLETVISKVATFKKPGVSGHGLYELKKECLKEFNPFFYHYTKSQHSKAEDAQ
KKRRALEGSDKALRPPVPPPFTQAFSSIVWLLCCDVFVHVLRRVLQRAVEERSALWTEAM
IQRALHLVGQALLEEKNQLEACSVEEVTFDFSLKARKVGSDHGKSLFHFLSKIKSHPSLE
AHNDMINWTLQMFEIVKCLREKSSPSASCAANQTKAEESILDKEKAERKRKAEAAKLHRQ
KIMAQMSAMQKNFIETHKMLYDNVPDSGIQAEPVVSTESSIMDLESRVAVGPKQGMCPTD
WETLTCILCQEEQEVQAQAPAMVLTACVQRSTVLTQCRGKTLSPEESSYPLFMPPDLSVG
IHTGSCGHVMHATCWQKYFEAVQNTTRNRLHAELIIDLENGEYMCPLCKSLCNTVVPIVP
MEPSKLNYESAEMIGQFLTLPRWIQIVLARIKGLRVLRGAENTTETGTEETGLLEDTHTD
FRSILSFGVQPPPKYSSSIMEMLVVCATTVHRVGLQTAPNELCPHVPVMTWNTCAYTIQA
TENMLQEEGKTLFGSLQNRQLAGLKALVQFSAIQRMKSSQSVIQKHFTDMIAVLLPVSNA
ESTPTILEVDFFNLLVGLVLSIPVLYQEENVDLQPSAISTVYNQLHLVHLVTMAHIVQVL
LSSQDLNAEAVGGGDAEEVRTAATVYSTVSQHAGGLKSGVCASMTVDTVKRGVLPFLRCA
ALFFHCLTGVPAPEELSSTAVSCESQLPLLCSYLALPCNLFQLFQDHQDTATVLIQRWCG
NEAVSKGLKGEMHIRYPRKRNRLIDLPEDYSVLLNQASHFKCPKSSDDERKHPTLCLFCG
VMLCSQSPCCQVQLDGEEVGACTAHAATCGAGVGMFLRVRECEIVLMASKTRGSTYPSPY
LDEYGETDPQLNRGNPLHLCPERYRKLHQMWQQHCILEEIARSLEVLNVMFAFEWQML
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggtgaaaaatcagtaaacgcgctccagttatgcacgaaatggtgggaggcc
tcagaccggcagtctgcaatacgacagcatgtggcagagaaggtcccctgtatttattgc
ctgcaggctgaatcccagcaggtggaagaggagaaacgagtacaggaatgtatcctgcag
cctctggagtacttcctgtttggggaggaccctagtgtcggcctggagaaactacaacaa
agaaacggtggctcttcctctcagctgtgtggacgtgtttttaaagagggcgagacggtc
tactcctgcagggattgtgcaatagaccccacctgtgtgctgtgtatggactgctttcag
aacagtgtacacaaaaaccaccgctacaagatgcacgcatcattaggaggaggtttctgt
gactgtggcgatttggaagcctggaagaccggcccctgttgctcccaacacgactctggc
accgccatagccatggaaacagatgagtgtgtgttggaggcagctctgcaagaacgtgct
cagatgctcttccaggctctgctgcagtacgtcactgacctgatggtgtgggaggaaggg
gatgagcttccaccagagatggaacctaggtcaaaggagaacatgtactactgtgtgctt
tacaatgatgagcaccactcgtatgatcatgtgatctacactcttcagagagccatcagc
tgtaaccactctgaagctcatgcgtacactacttttattgacaaggaggggcgcagagcg
gtcaaaagaggaagcctgagctcttgtcaacaagccaaagagcttataaggtccagttca
gagcaaattacccagcagcccttgcgagtggagctaattcattcagctgtcatggctcat
caaacctttgccctcaggctggttacctggttccagcagatcattggctactcagtgggc
tttaggcaggtgttttgccaggtggctctggagcccagtgctgacagcagtaaactttgt
ttaatcagcagactcatgttgcgtgatgccagactttataaaggagctcgcaaggttatc
catgagttgattttctgtagcctgctgatggagactgaatacaagaggcagtttgccatg
aaattcacagagcattacaagcaattacaggaggattttatcagagatgaccatgagcgg
aacatctccattacagccttgtctgtacaaatcttcactgtacccactctggccagacag
ctgattgaagagggcaatgtaataaaggtgattatagatacagtcatggagatgctgagg
gaacatctggacagcaaccaacgtttctattttcagggctataattctgacaagttcttc
aggttccaagtgatattccgtgacctcaagtacattctaatcagtaaacccaacatatgg
actgaacagttaagaggaaagttcctggaaggtttcgctgtttttcttggattccttaat
tgcatgcagggaatggaggaagtcaaaagacagattagtcagcacattgaggtggagcca
gaatgggaggcaggttttaccattcagatccatctccgccatattctgtccatgtttcaa
gactggtgcgcctctgatgaaagagttttattgctagcctttcaggagtgttaccgtgtg
cttcagcgctgcaccaatcagcccttccacagtgagcccactgaccactacatgtgcaag
cacatccttcacactcgctcttacaaagtctctcaagaacctgtctccatccacctgccc
atcactagactcttggctggtttgtatgtcctcttgtgtcggacaggagctgtaattcac
ctccctgattttatggatcctgagcagatcgacttgcccttttttgctgagttccctctg
cgttgtgtggtactagctgctcaggtgtctgcggaaatgtggcgccgaaatggcctctcc
ctagtcaaccaggtgtactattatcaggatgtgaaatgcagagatgagatgttcgacaaa
gacatcatcatgctgcagattgctgcttccaaaatggaccccaaccactttgtcatgcta
attctactgagatttgagctctttgaggtgtttaacggaaattgctcaagtaaagatcag
gacctccagaaacagtggaacagattgacagaagaaatgctcttcctgttgattatcatc
acaggtgagcggtatgtccctggaatcagtaatgtgactaaagaggatgtgacgatgagg
gaagtgattcatctattgtgtatagaacctatggctcacagtagcatggttaaaagcctg
cccgaaaatgaaaatcaggaaactgggcttgaaactgttatctcaaaagttgccacattc
aaaaaaccaggagtttctggtcatggtttatatgaactgaagaaggaatgtcttaaggag
tttaaccccttcttttaccattacaccaaatcacagcacagcaaggctgaagatgcacag
aagaagagaagggccctggaagggagtgacaaagctcttaggccaccagtacctcctccc
tttacccaggccttctccagcatagtatggctgctctgttgtgatgtgttcgtccatgtg
ctgaggagagtgttgcagagggcagttgaggagcgttctgctctgtggaccgaagccatg
atccaaagggcattgcatcttgtaggccaggctttgctcgaggaaaaaaaccagttggag
gcctgtagtgttgaagaagtaacatttgacttcagtctcaaagctcgaaaagttggctcg
gatcatgggaagtcattgttccatttcctatccaaaattaagtcgcatccttctcttgaa
gctcacaatgacatgataaattggacactacagatgtttgagattgtgaagtgccttcgt
gagaaatccagcccctctgcttcgtgtgctgcaaatcagaccaaggcagaggagagcatt
cttgacaaagaaaaagcagagcggaaaaggaaggctgaggctgctaagcttcacagacag
aagatcatggctcagatgtctgccatgcagaagaactttattgaaactcacaagatgctg
tatgacaatgtgcctgatagtgggattcaggccgagccagtggtctcaacagaaagcagt
ataatggacctggagagtcgtgtggctgtggggcctaagcagggaatgtgtcctactgac
tgggaaactctcacctgcatcctctgtcaagaagaacaggaggtgcaggctcaggctcca
gccatggtacttactgcctgtgttcagagatctacagttctcacccagtgcaggggcaaa
accctctccccagaagaaagctcctaccccttgttcatgccccctgatctgtctgtgggc
atacacactgggagctgtggccacgtcatgcatgccacctgttggcagaagtattttgag
gcggtacagaacaccactaggaaccggctgcatgctgagctgattatagacctggagaat
ggagagtacatgtgcccactctgcaagtctctctgtaacactgtggtccccattgttccc
atggagcccagcaaactcaactatgagagtgctgagatgattggtcagttcctcactctt
cctcgttggatacaaatagtgctcgcacggatcaagggactccgagtccttcgaggagcc
gaaaatacaactgagacaggaacagaggaaaccggactgttagaggacacgcacactgac
ttcaggtcaatcctcagctttggagttcagccaccgccaaaatactccagcagtataatg
gaaatgctggtagtgtgtgccactacagtgcacagggtgggtctgcagacagcacccaat
gagctgtgccctcatgtacctgtcatgacctggaacacttgtgcctacactatccaggct
acagaaaacatgctccaggaagagggaaaaactctctttggatctctgcagaacagacag
ctggctggtctcaaagcactggtacagttctccgctattcagcgaatgaagagctctcaa
agtgttattcagaagcatttcacagacatgatagcagtattgttacctgtgtctaatgca
gaaagcacacccacaatattagaagtagatttctttaatctcttggtggggctagttctg
tcaatacctgtattgtaccaagaggagaatgttgacctgcagccttcagcaatcagtact
gtttataatcaactccatctagtgcaccttgtcaccatggcccacatagtacaggtccta
ctatcatcacaggacttgaatgcagaagcagtaggaggaggagatgcagaggaggtcaga
acagcagcaaccgtgtactctactgtatcacaacacgctggggggctgaagtctggtgta
tgtgcttccatgactgtagacacagtaaagagaggtgttctaccctttcttcgctgtgct
gcacttttctttcattgccttacaggagtgcctgctccagaagagctgtcgagtactgca
gtgtcctgtgagagccagttgcctcttttgtgtagttacctcgctctgccctgcaacctg
tttcagctcttccaggaccaccaggacaccgcaacagtcctaatacagaggtggtgtggg
aatgaagctgtatcaaaaggtctgaagggagaaatgcacatcaggtatccacggaagaga
aacaggttaatagatcttcctgaagattacagtgtgctgcttaaccaggccagccatttt
aagtgtccgaagtcatcggatgatgagcggaagcacccgacgctgtgtctgttctgtggg
gtcatgctgtgctctcagagcccgtgctgtcaggtgcagctggatggcgaagaggtggga
gcttgcacggcccatgctgccacttgtggagctggagtaggcatgttcctcagggtgaga
gagtgtgagattgttctgatggccagcaaaacacgtggaagcacatatccatctccttac
ctcgatgaatatggggaaacagaccctcagctaaaccgtgggaatccgctgcatctgtgt
cctgagcggtacaggaagctgcaccagatgtggcagcaacactgcatccttgaggagatt
gctcgcagtctggaggtgctcaatgtcatgttcgcttttgagtggcagatgctctga
DBGET
integrated database retrieval system
