Ictalurus furcatus (blue catfish): 128612836
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Entry
128612836 CDS
T09387
Symbol
pax1a
Name
(RefSeq) paired box protein Pax-1a
KO
K09382
paired box protein 1/9
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128612836 (pax1a)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
128612836 (pax1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_28
HTH_29
Actino_peptide
Motif
Other DBs
NCBI-GeneID:
128612836
NCBI-ProteinID:
XP_053489246
LinkDB
All DBs
Position
9:complement(15778814..15783154)
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AA seq
349 aa
AA seq
DB search
MEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPNVVKSIREYKQGDPGIFAWEIRDRLLADGVCDKYNVPSV
SSISRILRNKIGNLSQPNQYESGKQATSQPSLSYNHLYPYTYPNAMSPSGTKMSNSAGVP
VTGGHVSIPRGWPSAHTVSNILGIRAFMDPAAIAGTEGYTPKMEDWGSVNRAAFPSTHGV
NGIDKSSIETDIKYPQPSSTLSSYVAPCAYSPSNQYGVYSGAAGSYVSSGHHWQAQGSSA
MTIHSGDIHSAMSFKHTARDGDRKPPSPLSKQQHEVLSIHGLSLPTSSS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacctatggggaggtgaaccagttaggaggagtttttgttaacggccgacct
cttcccaacgccatacgactaagaatagtggagttagcacagcttgggatccgtccgtgc
gacatcagccgtcaactccgggtttcccatggctgtgtgagcaagattctggcgagatac
aacgaaaccggctccatattgcccggtgcgatcggaggcagcaagccgcgggtaacgaca
ccaaacgtggtgaagagcatacgggaatacaagcaaggagacccggggatttttgcctgg
gagattcgggaccgacttctagcagatggagtatgtgacaaatacaacgtgccctctgtc
agctccatcagccggattttacggaacaagattggcaacctctcccagcccaaccagtac
gaaagtggcaagcaagctacgtcacagccaagtctctcttacaatcatttatatccgtac
acataccccaatgcgatgtccccttccgggaccaaaatgagtaattctgcgggtgtcccg
gtcaccgggggacatgttagcataccgcgaggctggccttcagctcacaccgtcagcaac
atactgggcatacgtgctttcatggaccccgcagctattgctgggactgaaggctacaca
ccgaaaatggaggattggggtagtgtgaaccgagcagcgtttccttccacacatggagtc
aacggaatagataaatcctccattgagacggacataaagtaccctcagccttcatcgact
ctgtctagttatgttgcgccgtgtgcctattctccctcgaatcagtatggtgtgtatagt
ggtgcagcaggcagctatgtgagctccgggcatcactggcaggctcagggatcaagcgct
atgaccatccattcaggggacatccactctgctatgtccttcaaacacacagcccgagac
ggagacagaaaacccccgagtcccctaagtaagcaacagcacgaagtgctcagcatacac
ggactcagccttcctacgtcatcatcatag
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