Ictalurus furcatus (blue catfish): 128613004
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Entry
128613004 CDS
T09387
Symbol
dhx32b
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128613004 (dhx32b)
Enzymes [BR:
ifu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128613004 (dhx32b)
Spliceosome [BR:
ifu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128613004 (dhx32b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
128613004
NCBI-ProteinID:
XP_053489497
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All DBs
Position
9:complement(10191505..10213069)
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AA seq
723 aa
AA seq
DB search
MEGTADMAVDQDLGCDDVLEFNQFDGLPFSSRYYNLLKERKALPVWGAKCEFMDYITNSQ
LVIVSGTAKTGQSTQIPQWCAEFCLSVQYRHGMVVCTQIRRQSTVDLALRVADEMDVNIG
HEVGYVIPFQNCCSTDTVLRYCTDHMLLSEMMSDPLLEQYGVVLIDQAQERTVSTDLLLG
LLKDVLLARPELRLVILTAPRSSDKLLRHYGNVPLIQLEAERPSEMVYGTGRGGVKDYLY
ASLQLALEVHQSQEHGDIVVFLATEQEIECARAILRREGAGVASSLGELIPVSVCPEQEH
SLPVLTEPEGRCRRVFLTCGPTEDLFWAMHSIRFIIDAGVQKRYVYNPRIRASSIVIQPI
SKSQAECRKQLIGPTGKCFCLYLENTSLPTENVPHILESDITSTVLFLKRMEIAGLGHCD
FIDRPDPEGLMQALEELDYLAALDNDGNLSEIGIIMSEFPLEPQMAKTLLASCEFDCVSE
VLTIAAMLTAPSCFLVPPVEFKQQALKCHQRFHHTVGDHFTLVNVYNAYKHSQHSSNCSI
ERWCDEHFLSLSALQMADAVRAELTEILKRLELPVSCSAFGSKTNTLNIKLALLAGFFMQ
VARDIDGTGNYFILTHKHVAQIHPLSVYGAESPKQNLPEWVLYHEHTLSENNCIRTVTQI
SAHELIQMTPQYFFYNLPSSESKDILQYVIKHGSAAPGQDESKAPTLNNIASEEHSYERC
VIQ
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggagggaactgcggacatggctgtagatcaggacttgggctgtgatgatgttctcgag
ttcaaccagttcgacggtcttcccttttcctcacggtattataacctactaaaggagagg
aaagctcttccagtttggggagctaagtgtgagttcatggactacatcaccaacagccag
cttgttattgttagtggcactgcgaaaactggacaaagcactcagatcccacagtggtgt
gcagagttctgcctgtctgtgcagtaccggcacggcatggtggtgtgcactcagatccgc
cggcagagcacagtggatctcgccctgcgtgtggccgatgaaatggacgtgaacattggc
catgaagtaggatacgtcatccctttccaaaactgctgctccaccgacactgtgcttagg
tactgcactgatcacatgctgcttagtgagatgatgtccgacccactcttggagcagtat
ggtgtggtgttgatcgatcaggctcaggagcgcacggtcagcacagacctcctactcggc
ctgcttaaagatgtgctgctggcgcggcctgagctgcgtctggtcatcctcactgcacct
cgatcctccgacaagcttctacgccactacggaaacgtgcccctgatccagcttgaggca
gaacgaccttctgaaatggtgtatggcactgggaggggaggtgtcaaagactatttgtat
gcctctctccaactggctttggaagtccaccagtctcaagagcatggagatattgtagtg
tttctggctactgaacaagagattgaatgtgctcgtgccatcttgcggagggaaggggct
ggtgtagcttcatcactaggtgagctcattcccgtgtcagtctgtccagagcaggagcac
agtctgcctgtacttacagaaccggagggtaggtgcaggagggtcttcctcacgtgtggt
ccaactgaagacttattctgggccatgcatagcattcgcttcatcattgatgctggagta
caaaaaagatatgtgtacaaccctcgaatcagagccagctctattgttattcaaccaatc
agcaaaagccaagctgaatgccgcaaacaactgattggtccaacagggaagtgtttctgt
ttgtacctggagaacacgtcccttcccactgagaatgtgcctcacatcttggagtcagac
atcacttccacggtgcttttccttaagaggatggaaatcgctgggttgggtcactgtgat
ttcattgataggccagatcctgagggcctcatgcaggctttagaagaactggactacctg
gcggctctggataacgatggtaatctgtctgagattggaataattatgtctgaatttcct
ctggagccccagatggctaaaacacttctggcttcctgtgaatttgactgtgtgagtgag
gtgctcacaattgctgccatgcttacagctccaagttgtttcctggtccctcctgtggag
ttcaaacagcaggccttaaagtgccatcagaggttccatcacacagtaggagaccacttc
accctagtcaatgtgtacaatgcctacaaacacagccagcacagctcaaattgcagcatc
gagcgctggtgtgatgagcatttcctgagtttaagtgcccttcagatggccgatgcagtt
cgagcagagctcactgagatcctgaaacgtttagagctgccagtgtcatgttcagccttt
ggctcaaagacaaacacactgaacatcaaactggctctgctggctggcttcttcatgcag
gtggccagggacattgatgggacagggaattacttcattcttacccacaagcatgttgct
cagatccatcctctctctgtctatggagctgagtcgcccaagcagaaccttcctgagtgg
gttttgtatcatgagcacacactgtctgagaataactgcatcagaaccgtcacccagatt
tcagcacatgagctcatccagatgactcctcagtatttcttctacaacctgccttctagt
gagagtaaagacatactgcagtatgttataaagcatggctcagcagcaccgggtcaggac
gagagcaaagcgccgaccctcaacaacatcgccagtgaagaacattcctatgaacgctgt
gtcatacagtga
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