Ictalurus furcatus (blue catfish): 128613072
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Entry
128613072 CDS
T09387
Symbol
pals1a
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128613072 (pals1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
128613072 (pals1a)
Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
PDZ domain-containing proteins
MAGUK family proteins
128613072 (pals1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
SH3_1
PDZ_2
L27
MMR_HSR1
CSN4_RPN5_eIF3a
SH3_9
Motif
Other DBs
NCBI-GeneID:
128613072
NCBI-ProteinID:
XP_053489608
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Position
9:complement(6132427..6167206)
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AA seq
703 aa
AA seq
DB search
MQNLSLISLASLAHTFPREPHACIMTTSHMNGHVSESEDRAAGTSEALDSSGHWHREMAV
DCPGELGARTLPVRRSAQLERIRQQQEDRRRREEEGRNRQELDVNSSMRLKKLAQNPKVG
IDNPTFEPLEGPGMSLVQLQGFGGAPRLLELEELLMSLKQVQHCLGDAQSQEDVELVLQL
VQKPDFQKAFNIHNAVALHMNQPSPPFPLTDRAQSLVHEVQAMLHNSSQKEGLDLSTLLK
SPHMLALMLAHDSVAEQEMQLEPVGPLDSPCETLTQWGGETVRIVRIEKAKDIPLGATVR
NDMDSVIISRIVKGGAAEHSGLLHEGDEILEINGVEIRGKDVNEVFDILAEMHGTLTFIL
IPSPNTKPPPIKETVVHVKAHFDYDPSDDPYVPCRELGLCFQKGDILHIISQDDPNWWQA
YRDGDEENQPLAGLVPGKTFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKKRKKLLYNA
NKTDDYDNEEILTYEEMALYHQPANRKRPIALIGPPNCGQNELRQRLLSSEPDRFGGAVP
HTTRNRRDGEVNGRDYHFVSRQAFEMDSAAGKFIESGEFEKNLYGTSTDSVRQLINSGKI
CLLCLHTQSLKVLRSSDLKPYIIFIAPPSQERLRALLAKDNKNPKPEELRDIIEKAREME
QNFGHLFDAAIVNTDQDKAYQELLRLINKLDTEPQWVPSSWLR
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacttgtccctcataagccttgcatctctcgcacacacctttccacgtgaacct
cacgcctgcattatgaccacctcccacatgaatggccatgtaagtgagtcagaagacagg
gcagcaggcaccagcgaagccctggactcttctggccactggcacagggagatggctgtg
gactgcccaggtgaactgggagctcgcacgttgcctgtacggcgcagcgcccagctggaa
cgcattcgccaacagcaggaggaccgcaggagaagagaagaggaaggtcgtaaccgtcaa
gagctcgatgtcaactcctccatgcgcctcaagaagctggcacagaaccccaaggtgggc
attgacaaccccacctttgagcccttggagggtcctggcatgtcactagtgcagctgcag
ggcttcggcggggcaccacgactactggaattggaggagttgctgatgtctctgaagcag
gtacagcactgtctcggtgatgcgcagagtcaggaggacgtggagctggtgttgcagctc
gttcagaagcctgactttcagaaggccttcaacatccacaatgctgtggcactacacatg
aaccagccaagtcctcccttccccctcacagaccgtgcacaaagccttgtacatgaggtc
caggccatgctgcacaacagctcacagaaagagggtcttgacctaagtactttgctcaaa
agtcctcacatgctggcacttatgctggcccacgacagtgtggctgagcaggagatgcag
ctagagcctgtgggtcctcttgatagcccatgtgagacccttacacagtggggtggtgag
actgtcaggattgtacgtatcgagaaggccaaggacatcccgctgggagccacggtgagg
aatgacatggatagtgtgattattagtcgcattgtgaaaggaggggcagcagagcacagt
ggactgctccatgaaggtgatgagatattggagatcaacggggtcgagatccgtggcaaa
gatgtcaatgaagtgtttgatatcctggcagagatgcacggcacattgacctttattctg
attcccagcccaaatactaaacctcctcccattaaagagactgtggtgcatgtgaaagca
cattttgactatgacccttctgatgacccgtacgtaccatgccgggagttgggtctctgc
tttcagaagggggacattttacacatcatcagccaggatgaccccaactggtggcaggct
tacagagatggagatgaagaaaatcagcctctagccgggctggtgccaggtaagactttt
cagcagcaaagggaagctatgaaacaaacaatagaagaagataaggagcctgaaaaatca
gggaagctgtggtgtgcaaaaaagaacaagaagaagcggaagaaactgctgtataatgca
aacaagacagatgactatgacaatgaggagattcttacctatgaggagatggcactgtac
caccagccagccaatcgcaagcgccccattgctctgattggtcctccaaactgtgggcag
aatgagctgagacagagactgctgtctagtgagcctgatcggtttggaggtgctgttcct
cacaccacacggaaccggagggatggtgaagtgaacgggcgtgactaccactttgtgtca
cgccaggcctttgagatggattctgcagcagggaagttcattgaatcgggagagtttgag
aaaaacctgtatggcaccagcacagattctgtgcggcagctaatcaatagtggcaaaatt
tgccttctttgtctgcacactcagtctttgaaggtattgcgcagctctgacctcaagccc
tatattatcttcattgcaccaccctcccaggaacgactgcgtgccctcttagcaaaagat
aacaagaacccgaagcctgaggagctgagggacataatcgagaaagcaagggagatggag
cagaactttggccacttgtttgatgctgcaattgtgaacactgaccaggacaaggcttat
caggagctgttgcgcctcatcaacaaactggacacagagcctcagtgggttccttcatct
tggctgcgctga
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