Ictalurus furcatus (blue catfish): 128613210
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Entry
128613210 CDS
T09387
Symbol
limd1a
Name
(RefSeq) LIM domain-containing protein 1
KO
K16682
LIM domain-containing protein
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128613210 (limd1a)
03036 Chromosome and associated proteins [BR:
ifu03036
]
128613210 (limd1a)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
128613210 (limd1a)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
128613210 (limd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
DUF6487
Motif
Other DBs
NCBI-GeneID:
128613210
NCBI-ProteinID:
XP_053489830
LinkDB
All DBs
Position
1:complement(24991118..25020002)
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AA seq
569 aa
AA seq
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MDKYEDLGLEASKFIEDLNMYEASKDGLFRMKRDAGNNPDFEETRKVFASKMTKIHMQKH
QEEMARNTLPERLNGGHVKVADGTFYTKDRPPISSSRHEAASKPPILSGPSTCYEGHKHH
PLSPHDARVFSYGSNHDLLRSCHNPSVELGNSYHQTMPFPTSPSGTWASKNNPQCQASSP
TFSLSSSAPGSNMNRGATPPLRQSSPCQTLTSTGKPDCFPPSDTDAHGEPDSHHKSSPYV
SPTHHSEPIMSRKTYGDPRHNGVPQSTGTCSAVQLSLIAQSQPETPQPKGQVQCHTRGHS
GPTVSDNLANSTAEPARSDAHSPPQALKLPCHTLHIQPEPGPSAAEIKLEALTERLEKEM
DAQPKADYFGSCVKCSKPVYGASQACQAMGSLYHDSCFTCSACSRKLRGKAFYYVSGKVF
CEEDFLYSGFQQSADKCSVCGHLIMDMILQALGKSYHPGCFRCVICNESLDGVPFTVDTE
NKIYCVKDYHRVLAPKCAACSQPILPSEGSDETIRVVSMDKDYHVECYHCEDCKMELNDE
EGHRCYPLDGHLLCHTCHLKHIESSCPSV
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacgaggatttggggctcgaagcgagcaaattcatcgaggacctgaatatg
tacgaggcgtccaaggacggactgttccgcatgaagagggacgcaggaaataacccggac
tttgaggaaaccaggaaggtgttcgcctccaaaatgaccaaaatccacatgcagaagcat
caagaagagatggcgagaaacacccttccagaaaggttaaacggtggacacgtcaaagta
gcagatggcacgttttacaccaaagacagaccacctatcagtagctccagacatgaagct
gcatctaagccacccattctctcaggaccgagcacatgttatgaaggacataagcatcat
ccactcagcccacatgatgccagggtttttagctatggaagcaatcatgacctcttgcgc
tcatgccataatccatcagtggaacttggaaactcttatcatcaaactatgccttttcct
accagtccatctggcacttgggcatctaagaacaatcctcaatgccaggcgtcatcaccc
acgtttagcctgagttcaagcgcacctgggtctaacatgaaccgtggagcaactcctcct
cttcgtcagagctcaccatgccaaactttaacatccactgggaagcctgattgtttccca
ccatcagacacagatgctcatggagaaccagactctcaccacaagtcttctccttatgtt
agccctactcatcactctgaacccatcatgtctcggaaaacctatggagacccacgccat
aatggggttcctcaaagcactgggacgtgctctgctgtccagctgtccctaatagcacaa
agccaaccagaaacacctcagcctaaaggtcaagtccagtgccacactcgaggacatagc
ggtcctactgtttcagacaacttggcgaactctactgcagagccagcccggagtgatgcc
cacagcccccctcaggcgctcaaactgccatgccacactctccatatacagcccgagcct
gggccgtctgcagctgaaataaaattagaagctctaactgagcgactggaaaaggagatg
gatgcccagcctaaggctgactacttcggcagttgtgtgaaatgcagtaagcctgtgtat
ggagccagtcaggcttgccaggccatgggtagcctctaccacgacagctgcttcacctgc
agtgcctgcagtcggaagctcagggggaaagcattttactatgtttctgggaaggtgttt
tgtgaagaggattttctgtactctggctttcagcagtcagctgacaaatgcagtgtatgt
ggccacctgatcatggacatgatcctgcaggcactgggcaagtcctaccatccaggctgc
ttccgctgtgtcatctgtaacgagagcctggacggcgtgccttttactgtggacacagag
aacaagatctactgtgtcaaagactaccacagggtccttgctcctaaatgtgccgcatgc
agtcagccaatcctgccctctgaggggtctgatgaaaccattcgagtggtatctatggat
aaagactatcatgtagaatgctatcactgtgaggactgtaagatggagctgaatgatgaa
gaagggcatcgctgttacccactagatggccacttgctgtgccacacatgccacctcaaa
cacatcgagtcaagctgcccgtctgtctga
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