Ictalurus furcatus (blue catfish): 128613300
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Entry
128613300 CDS
T09387
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128613300 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ifu01007
]
128613300 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ifu03016
]
128613300 (kars1)
Enzymes [BR:
ifu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
128613300 (kars1)
Amino acid related enzymes [BR:
ifu01007
]
Aminoacyl-tRNA synthetase
Class II (A)
128613300 (kars1)
Transfer RNA biogenesis [BR:
ifu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
128613300 (kars1)
Prokaryotic type
Other AARSs
128613300 (kars1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
128613300
NCBI-ProteinID:
XP_053489938
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All DBs
Position
10:28359430..28369971
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AA seq
613 aa
AA seq
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MRIDLRIMLTLVRAARQPVCRAVGLRVQKFVPHVLQTVPSLIEGCRWRGDKSELKRRAKA
EKKAAEKEAKTKDQAQQNKEANDEQHVDGLDEETLDPNQYFKIRTQAVQALKGTAEDPYP
HKFHVDLSLTEFIEKYNHLQPGEQLSDVVLNVSGRVHAKRASGAKLLFYDLRGEGVKLQV
MANSRNYKSEEDFVHINNKLRRGDIIGVRGNPGKTKKGELSIIPVEMTLLSPCLHMLPHL
HFGLKDKETRFRQRYLDLILNDSVRQKFVTRAKIITYLRSFLDQLGFLEIETPMMNLIPG
GAVARPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFT
TCEFYMAYADYHDLIEITEKLLSGMVKHVTGGYKLTYHPDGPEGQGYEIDFTPPFKRISM
THDLEKEMGVKFPAADTYDSDETRKFFDDLCAQKGVDCPPPRTTARLLDKLVGEFLEVKC
INPTFICDHPQIMSPLAKWHRSQKGLTERFELFVMKKEICNSYTELNDPIRQRELFEQQA
KAKAEGDDEAMFIDETFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPD
DNKPAAPAEGTSV
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattgacctgcgcatcatgttgacgctggtcagagcagccaggcagcccgtgtgc
cgggccgtcgggttacgggtgcagaagtttgtgccccacgttctgcaaacggtgccttcg
cttattgaaggatgtcgctggagaggtgacaaaagtgagctgaagaggcgcgcgaaggcg
gagaagaaggccgcggagaaggaggccaagaccaaggaccaagcgcagcagaacaaagag
gcgaatgacgagcagcatgtggacggactggacgaggagactctggaccccaaccaatac
ttcaagatccgcacgcaggccgtccaggctctgaagggaaccgctgaagacccctatccc
cacaagtttcacgtggacttgtctctcaccgagttcattgagaaatataatcacctacag
cccggggagcagctgtccgatgtcgtccttaacgtttctggtcgtgtccacgccaagaga
gcctccggggccaaactgctcttctatgacctgagaggagagggggttaagctgcaggtt
atggcgaactccaggaattacaaatcggaggaagacttcgtgcacatcaacaataaattg
cgccgtggtgacatcatcggggtacgcggtaatcctgggaagacgaagaaaggcgagctg
agcatcatccctgttgagatgaccctgctgtctccatgtctgcacatgcttcctcacctg
catttcggcctgaaggacaaggaaactcgtttccgtcagcggtatttggacttgatcctg
aacgactctgtgaggcagaagtttgtgacacgtgccaagatcatcacatacctgcgcagc
ttcctggaccagcttggtttccttgagatcgagaccccgatgatgaacctgattcctgga
ggcgcagtggctcggcctttcatcacctaccacaacgagctggatatgaacctgtacatg
aggatcgcgcccgagctttaccacaagatgctggtggtcggaggtatcgaccgcgtctat
gaaatcggtcgtcagtttagaaacgaaggcatcgacctcacgcacaaccccgagttcact
acgtgcgagttttatatggcctacgctgactaccacgacctgattgagatcactgagaag
cttctctcaggaatggtgaagcacgtcacaggaggttacaagttgacctatcaccctgat
ggaccggaaggacaaggctatgaaattgacttcactcctccttttaagagaatcagcatg
acccatgatctggaaaaggagatgggagtgaaattcccagccgctgacacttacgattct
gacgaaacccgcaaattcttcgacgacctgtgtgctcagaagggagtggactgtccgcct
ccaagaacaacagctcggctcctggataagttggtgggagagttcctcgaggtgaaatgc
atcaaccctacgtttatttgtgaccaccctcagatcatgagcccactggcaaaatggcac
agatcccagaaagggctgaccgagcgcttcgagctcttcgtcatgaagaaagagatctgt
aactcctacaccgagctgaacgacccgatccggcagcgcgagctctttgagcagcaggct
aaggcgaaggcagaaggtgacgacgaggccatgtttatagatgagacgttctgcacggca
ttagaatatggtcttccacctactgcaggctggggcatgggcatcgaccgtctcaccatg
ttcctcactgactccaacaacatcaaggaggttcttctcttccccgccatgaagcctgat
gacaataaacccgccgctccagcagagggcacttctgtttaa
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