Ictalurus furcatus (blue catfish): 128613360
Help
Entry
128613360 CDS
T09387
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128613360 (hps3)
Membrane trafficking [BR:
ifu04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
128613360 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
128613360
NCBI-ProteinID:
XP_053490025
LinkDB
All DBs
Position
10:12266848..12286312
Genome browser
AA seq
1006 aa
AA seq
DB search
MVHVYNCHPFASQRIVPAAQEPGLVCCGGGALFVVSAGGCKIEAYHMQQEECPLICRFST
MGIVHRIVYSQIGDYLVTIEEKNGATYLRAYTNWRYQAAEKKRVGVRLLGHLMRGPVHHG
TPKEQMEIVEMPLSETPLCTACCSITGALLVACAKSLVLFGLKRQSLSDQLDALDFERLL
ILYISGLSPLQVALCGGYVALQTELEVLVVKLENLEKTCASDEVHTQLPHDDMAAAGVTE
NDVKKEPQSPLESDDFFVFPKHLEMLGEKAKDCGVSLSLEWTGMETEASDSMGVTYILYR
RFAPDFFQGCSVEETRLHSLQLHPMYTGNPDVSSDLEKSDPACMFCFFSLPNAGYMYSLI
NTVELISTYHYPEKARQALLCNQFLHVITQNSLQCFSVRCSAVAARVEDPYIDTTMKACP
PFTMEVSALRIQLFIGLKSLCHDGNRIVLLTAADVETKEEIQRATRRSMSRKTSVSKLKE
PSETGHGWNLYVISTMSTLQLYREMVEYSKRYEQTSPASQNCIHLLSEAHLLLRASLLCP
ITDRAEIQEAFQESCAQLGDCFSRQDKRDCHLALPYYKMSGLSVTEVIQRNMAICRGPVP
NYGKGFLFFLKHSLYEETMEELSEETANTVLEIFSQAEPSQLPYVVSSSFMKNANPVRAR
AHLEQLELGGAPSVTVTLCKAAQALRLGDLHYYQQQMDRHAEMLQVYGFIEEPKLLVHHR
GKSVVPTQLAQHLRDTQDGLLVAAIVALHENSKVKLEEAELFFQELCKDGTEPQSIPQLL
VDFWEALLVASSQESIIQELLFHLTSVYIERITCREHSGIKALKTAEDLINSCSHYGPLF
PWLSILTPAQFNITHDHQEDLHKLQSLLCGPTLDVSSIVPLLEQLPDADNAGLSVHMLCA
TRLGQHESTIKKLLDRCPQAVISYATHELHGNKMALWWQKLFPELCERTRLSSGDNSVLI
AALKETLAVVAMELNPLEFLDLLPDDGTAHFFLPHLLKCSQRHLLT
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggtccatgtgtacaactgccacccgttcgcgtctcagcggatcgtccctgcggcgcag
gagcccgggctggtgtgctgcggcgggggcgcgctgttcgtcgtgtccgctggaggatgt
aaaatcgaggcgtatcacatgcagcaggaggaatgtcctctaatctgccgcttttccacc
atgggcatagtgcacaggattgtgtacagtcagatcggggattacctggtcaccattgaa
gagaagaatggtgccacctacctgagggcttacaccaactggcgttaccaagcagctgag
aagaagcgtgtaggtgttcgcttgctcgggcacctcatgcgcggcccggtccaccatggc
acccccaaggaacaaatggagattgtagagatgccattatcagagacaccactctgtact
gcctgctgctccataacaggtgccctgctagtggcctgtgcaaagagcttggtgctgttc
ggtctgaagcggcaatcgcttagtgatcaactcgacgcccttgacttcgagaggctcctc
atcctgtacatttctggtttgagcccgttgcaggtggcactctgtggtggctacgtggcc
ctgcagacagagctggaggtgctggtggtgaagctggagaacctggaaaagacatgtgca
tccgatgaagtgcatacacagctgcctcatgatgatatggctgcagctggtgttactgaa
aatgatgttaaaaaggaaccacagagtccccttgagtctgatgacttctttgtgttcccg
aagcatctggagatgctgggagagaaggcgaaggattgtggggtgtctctgtctttagag
tggactgggatggagacagaggcaagcgacagcatgggagttacctacatcttgtacagg
aggtttgccccagatttcttccagggctgcagtgtggaggagacacgcttacactccctg
cagctccaccccatgtacactgggaatccggatgtaagcagtgatctagaaaagagtgat
cccgcctgtatgttctgtttcttttctctgccaaatgctggttacatgtacagtctgatc
aacacagtagagctcatctccacctaccactacccggaaaaggcccgtcaggctttgcta
tgcaaccagtttctacatgtcatcacacaaaattctctgcagtgtttctctgtgagatgc
agtgctgtggctgctcgagtcgaggacccctacattgacaccaccatgaaggcctgtcct
cctttcactatggaagttagcgccctccgtattcagctgttcatcggtctgaagtctctg
tgtcatgacgggaatcgcattgtgctgctcacagctgctgacgttgagaccaaagaggag
atccagcgagcgactagaagatctatgtccaggaagacctcagtgtcgaagctaaaggag
cccagcgagactggccatggctggaacctgtacgtgataagcaccatgtccacactgcag
ctctacagagagatggtggagtacagtaagcgatatgagcagactagcccggcgtcccag
aactgcattcatctgctgagtgaagctcacctgctgctcagagccagtcttctctgtccg
atcacagacagagccgagatccaggaagccttccaggagagttgtgcccagctgggagac
tgcttcagcaggcaggataaacgggattgtcacttggctcttccatactacaagatgtct
ggcttgtcggtgacggaggtaatccagagaaacatggcaatatgcagaggtcctgttcca
aattatgggaaaggcttcctcttcttccttaagcactctctctatgaggaaaccatggaa
gagctcagcgaagaaactgctaacaccgtgttggagattttcagtcaggccgagccaagc
cagctcccatatgtagtgagcagctcattcatgaagaacgccaatcctgttcgtgcacgt
gcacacctggagcagctggagctcggtggtgccccatctgtcacagtcacactgtgtaag
gctgctcaggcactgcgcttgggagacctgcactactaccaacagcaaatggatcggcat
gctgagatgctgcaggtgtacggcttcatagaggagcccaagcttcttgtgcaccacaga
gggaagtccgtggtgcccactcagctagcacagcacctccgagacacccaggacggcctg
ctggtagctgccattgtggcgcttcatgagaacagcaaggtcaaactggaggaggctgaa
ctcttctttcaggagttgtgtaaggacggcacagagcctcagagcattcctcagctgctg
gtggacttctgggaggctctgctggtggcttcgtctcaggaatcgatcatccaggagctt
ttgttccacctcacctctgtatacatcgagcgcatcacgtgcagagaacactcaggcatt
aaagcactcaaaacagctgaagacttgattaactcctgctctcactatggaccactgttt
ccatggttgagcatcctgactcctgctcaattcaacatcacacatgaccaccaagaagac
cttcataaactccagtctctgctgtgtggcccaacactggacgtgtcctccattgtacct
ctgctagaacagctacctgatgcggataatgccggccttagcgtgcacatgctctgtgcc
accagactgggtcagcatgagagcaccatcaagaagctactggaccgctgccctcaagcc
gtcatctcctacgccacccacgagttacatggcaacaaaatggctctgtggtggcagaaa
ctgtttcctgagctttgtgagaggacacggctttcttcaggagataacagtgttctaatc
gccgccctcaaagagactctggcggtggtggccatggagctgaacccattagaatttttg
gacttgttaccggatgatggtactgcacacttcttcctacctcatcttctgaaatgcagc
cagaggcatctccttacatga
DBGET
integrated database retrieval system
