KEGG   Ictalurus furcatus (blue catfish): 128613370
Entry
128613370         CDS       T09387                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
ifu  Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ifu03036]
    128613370 (kdm4b)
Enzymes [BR:ifu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     128613370 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     128613370 (kdm4b)
Chromosome and associated proteins [BR:ifu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    128613370 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD_4 PHD DUF4537 53-BP1_Tudor
Other DBs
NCBI-GeneID: 128613370
NCBI-ProteinID: XP_053490049
LinkDB
Position
10:15964860..16031684
AA seq 1105 aa
MSEETAPDEAMNSTPAPTLQNPAVPSTALDFDPAPSPHLESSEPEPASAPPPGGNLAFKI
MTFRPTIEEFRDFAKYITYMETQGAHRAGLAKVIPPKEWKPRRSYETIEDMVIPAPIMQV
VTGQSGLFTQYNIQKKSMTVGEYRKLANSKRYCTPQHKDFDDLERKYWKNLTFVSPIYGA
DISGSLYDPDITEWNIGHLNTLLDMVEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDL
YSINYLHFGQPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLRHKMTLISPSILKKYS
IPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKMATQCTCRKDMVK
ISMDVFVRCLQPDRYELWKKGKDTTVLDHQRSTTLTSPELEHWRKNRVTFREKQLRRAQQ
KIKQIRRLKPEELKLLSDEGIELDVADYQKRLEEKEAQRKQQREEKMTREAMLTLEALER
EEQEAALREGAASQKPEAGKEPEQADEQEQKKKKKKKKVKSPEEDSFEQAFKPYALSKKN
EAQSNGGTAVGSPDSSLQANLYPKMKMKVEVKKSRRHPFSKPPMRTPTFIVKQEASSDEE
MYSGLSVGGAAEQEVKKQEQCHLWQTLSPDFVAEKQFNAGMATLEPHCAVCTMFCPYTQL
HKDSPPASDVSGVPVSRCGEQTRPLVPEMCFSAGMANTEPLPSSAETSMLLSCSCCNLQV
HASCYGVKPDTPQESWKCSRCYAVAWTAACCLCNLRGGALKMTTENRWVHVICAIAVAEA
RFVNVVERGPVDVSAIPDTRKSLKCVFCHKSTKQICGACIQCSHENCSTSFHVTCAHLAG
VVMKPADWPYVVSVTCHKHKQINVKQAKVTSRDLSVGQQAIGRSSDGWFYRCTIIGIGSQ
TYYEVNFDDGSYCDNIYPENVLSHDCLHNGPPELGELMVINTIDGRVLNASFVKEHVHKF
YQVEFQDETQLLLKQSEIHSLHQELPKRVLSRLVTMNTEDSQDKMGEEPQAAKRPRLPIP
PTMAAVESLDARLLLQGSSSVTSYSGFSVNPGNSNTQSTPTSTPVTASPADESYTHSSSY
VAYMESLLNSDFPPEDGEQAQGSMY
NT seq 3318 nt   +upstreamnt  +downstreamnt
atgtctgaggaaactgccccagacgaagccatgaactccactccagctccgaccttacag
aaccctgcggttccttcaacagccttggactttgatccagctccaagcccacacttggag
tcctcagagcccgaaccagcttctgcaccaccaccgggtggaaatttagccttcaagatc
atgaccttcaggcccaccattgaggaattccgtgactttgcaaagtacattacgtatatg
gaaacccaaggagctcatcgcgcaggcttagctaaggtcattcctcctaaagagtggaag
cccagacgctcctacgagaccatcgaagatatggtcattcctgcgcccatcatgcaggtg
gtcaccggtcagtccggacttttcactcaatacaacatccagaagaagtccatgactgtg
ggcgaatatcgcaaactggccaacagtaaaaggtactgcactcctcagcataaagacttt
gatgatctggagagaaaatactggaagaatttgacattcgtgtcaccgatctatggtgca
gacatcagcggctcgctatacgatcctgacataacggagtggaacattggacatctgaac
acgctgcttgacatggtggagcaagagtgtggcatcgtgattgagggcgttaacaccccc
tacctctacttcggcatgtggaagaccacatttgcctggcacacggaggacatggacctc
tacagcatcaactacctgcacttcggccagcccaagtcttggtacgccattcctcctgaa
cacggcaagaggctagaaagactggcgaaaggctttttccccggcagctctcagggatgt
gatgcctttcttcgtcacaagatgacccttatctctccctccatcctgaagaagtacagc
atcccttttgatcgaatcacgcaggaagcgggcgagttcatgattacgttcccgtacggc
taccatgcagggttcaaccacggcttcaactgtgccgagtccaccaacttcgccacactg
cgttggatcgactacggcaaaatggccacgcagtgcacgtgtcggaaggacatggtgaag
atctccatggacgtgtttgtgcgctgcttgcagccggaccgctatgaactgtggaagaag
ggcaaggacacgactgtcctggaccaccagaggtccaccacactgaccagccctgagctg
gagcactggaggaagaacagagtgacctttagagaaaaacagctccgcagagctcagcag
aaaataaagcaaatacgccggctgaagcctgaggagctgaagttgctgtcggacgaggga
attgagctggacgtggctgattatcagaagaggctggaggagaaggaggcacagaggaaa
cagcagagggaggagaagatgaccagagaggccatgctcactctggaggcactggagagg
gaggaacaggaggcagcactccgagaaggagcagcttcccagaagcccgaagctggaaag
gagccagagcaggcagacgaacaagagcaaaagaagaagaaaaagaagaaaaaggtaaaa
tcacctgaggaggacagcttcgagcaggcgttcaaaccttacgcattatccaagaagaac
gaggctcagagcaacggaggcacagccgtcggcagcccagattccagcttacaggcaaac
ttgtacccgaagatgaagatgaaggtggaagtgaagaagagtcgcaggcatccattcagc
aaaccacccatgcgcactcccactttcattgtcaaacaggaggcttccagcgatgaggaa
atgtactcggggctgtcagtaggcggtgcggcggagcaggaagtgaagaagcaagagcag
tgccacttgtggcaaaccctttcacctgacttcgtggcagagaagcagtttaatgctggc
atggcgactctggagccacactgcgctgtctgtacgatgttctgcccctacacacagctc
cataaggatagccccccagcctccgatgtctctggtgttcctgtgtctcggtgtggtgaa
cagactcggccccttgtgcctgagatgtgtttcagtgccggcatggcgaacacagagccg
cttccctccagtgctgagacgagcatgctgctctcctgctcctgctgcaacctgcaggtt
catgccagctgctatggcgttaagcctgacactccacaagaaagctggaagtgttctcgc
tgttatgcagtggcctggacagcagcctgttgtttgtgtaatctgcgaggaggagctttg
aagatgaccacagagaacaggtgggtgcacgtgatttgtgccattgcagtggctgaggct
cgctttgttaacgttgtggaaagagggccagttgacgtgtccgccatcccagacaccagg
aaaagtcttaagtgcgtcttctgccacaagtccacgaagcagatctgtggggcgtgtatc
cagtgttcgcatgagaactgctccacctccttccacgtcacctgtgcgcacctggccggc
gtggtgatgaagcccgcagactggccgtacgttgtgtctgtcacctgtcacaaacacaaa
cagatcaacgtgaagcaggcgaaggtgacctcgcgcgacctctctgtgggtcagcaggcc
atcggcaggagcagcgatggttggttttatcgctgcaccatcattggcatcgggtcacag
acctactacgaggtcaacttcgacgacggctcctactgtgacaacatttaccccgagaat
gtgctgagtcatgactgtttgcataatggccctcctgaacttggtgagctgatggtcata
aacacgatagatggacgagttcttaacgcctccttcgtcaaagaacacgtgcacaaattt
taccaggtggagtttcaggatgagacccagctgttgttgaagcagagtgagattcactcc
ctccatcaggagctgcctaagagagtgctctctcgtctggtgacaatgaacactgaagac
tctcaggacaaaatgggtgaggagcctcaggctgcaaagcgtccgcgtttgcccattcct
cccaccatggcagctgtggagtccctcgatgcccgtctcctgctccaggggtcctccagt
gtcacttcttactcaggcttcagtgttaaccccggcaacagcaacacccaatcaacaccc
acttccaccccggtgaccgcctctcctgccgatgagagctacacacacagctcgagctac
gttgcctacatggagtctctgctcaactcggacttccctccagaggacggtgaacaggca
caggggtccatgtattag

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