Ictalurus furcatus (blue catfish): 128613371
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Entry
128613371 CDS
T09387
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ifu04812
]
128613371 (katnb1)
Cytoskeleton proteins [BR:
ifu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
128613371 (katnb1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_RIG_1st
eIF2A
Beta-prop_IFT122_2nd
PROPPIN
WDR54
Beta-prop_IP5PC_F
Beta-prop_NUP159_NUP214
Beta-prop_LRRK2
WD_LRWD1
Beta-prop_WDR35_TULP_N
RMC1_N
WD40_like
Ge1_WD40
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
128613371
NCBI-ProteinID:
XP_053490051
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All DBs
Position
10:3320687..3340170
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AA seq
667 aa
AA seq
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MAVSNVKKMSWKLQDVVAQPSNVSSLVLGKSSSRLLATGGEDCRVNIWAVNKSNCIMSLT
GHTSPVECVQFSTSEEQVVAGSQSGSLRVWDLEAAKIFRTLMGHKANICSVDFHPFGEYL
ASGSMDTNIKLWDLRRKGCVFRYKGHTQAVRCLGFSPDGKWLASASDDSTIKLWDLTAGK
MITEFTAHTSAVSVVQFHPNEYLLASGSADRTIKLWDLEKFKMIGSSEGETSGRCVLFSP
DGSCLYSGSHDTLRVYGWEPDCCFDVVHVGWGKVVDFAICNSQMIGVSCSQTNVSLYVVD
LDRVKKSGVVQEQIHGGKPLAAPIPIGVTLRRNYERPTMSCSRQKMKQNADGDRCVEGER
RSPSSEDERDEESKAEITNPDDYKEIFQPRSAISRTPPKRREPFPAPLVDESFQVKPHLA
EEIITTLPDQLKAPNVSCTVTPTAPAQPVSVSRHVVTTSKLEPKLAVNPSIEPLGLIFGD
ILQPGLSGNTSVTADEEALVQIRKGHSTMCVMLTSRHKNLDTVRALWAGGDIKTSLDSAT
SMNDLSIVVDILNIINLKPPLWKLDTCMTILPQLEELLQSKYESYMQTGCMSLKLILKRF
WPLISDTLNAPPSVGVDITREERHQKCKMCYKQLKNLSNVVRNRAEQVGRHGSTFKELQL
LMAPLDY
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgtccaatgtcaagaaaatgtcatggaaactgcaagatgtggtggcccagcca
agtaacgtgtcttcactggtgttgggtaaatcatcaagtcgcttgctggctacaggaggg
gaggactgcagagtcaacatctgggctgtcaacaaatctaactgcattatgagtttgacg
ggccacacaagccctgtggaatgtgtccagttcagtacctcagaggagcaggtggtagct
ggctctcagtcaggttctctgcgggtctgggacttggaagctgctaaaatatttcggaca
ttgatgggtcacaaggctaatatctgcagtgtagactttcacccatttggggaatacctg
gcctcaggttccatggatactaacattaagttatgggatttgaggaggaaagggtgtgtg
ttcaggtataagggtcatactcaagcagtgcgttgtctgggctttagccctgatggaaag
tggcttgcttcagccagtgatgacagcacaattaagctttgggatttaacggctgggaag
atgatcacagaattcacagcacacacatcagcggtttctgttgtccagttccacccaaat
gagtaccttctggcttcaggaagtgctgacaggaccataaagttatgggatctggagaaa
ttcaagatgattggctcatcagagggtgaaacatctggaaggtgtgtcttattcagtcct
gatggtagctgtttatacagtggctcacatgacacattgcgtgtgtatggctgggagcca
gactgctgctttgatgtagtacatgtaggctggggcaaagtggttgactttgcaatctgt
aacagtcaaatgattggagtgtcgtgcagccagacgaatgtgagcttgtatgttgtggat
ctggaccgagtgaagaaatcaggagttgtccaagaacaaattcatggtggcaagccactt
gctgcacccattcctataggagtaacactaaggcgcaactatgagcgtcccaccatgtcc
tgcagcagacagaaaatgaaacagaatgcagatggagacaggtgtgttgagggggagagg
cgtagccctagcagcgaggatgagcgtgatgaggagagcaaagcagaaatcacaaatcca
gatgattataaagagatatttcagccccgcagtgctatctcacgaacacctcccaaaagg
cgtgaacccttccctgcaccacttgtggatgaaagtttccaggtgaagccccacttagca
gaagaaatcattactacattgcctgaccaactgaaggcccccaatgtttcctgcacagta
acgcccacagctccagcccagcctgtatcagtctcaaggcatgttgtcacgacatccaaa
ctcgaacccaaattagccgttaacccctccattgagcccctcggccttattttcggggac
attttacaacctggactaagtggaaacaccagtgtcacagcagatgaagaggcattggtt
cagatcagaaaagggcatagtactatgtgtgtgatgttgactagcagacacaaaaacctt
gacacagtacgggctctctgggctggtggcgacatcaagacatcactcgattctgctaca
tccatgaatgatctgtccattgtggtggacatcctcaatataatcaacctcaaaccgcca
ctttggaaactagacacctgcatgaccatcttgccccagcttgaggagttgctacagagt
aaatatgaaagttacatgcagactgggtgcatgtctttgaagttaattttgaagcgcttt
tggccattaatctcagacacactgaatgctcccccatctgttggagtggacattacacga
gaggagaggcaccagaagtgtaagatgtgctataagcagctgaagaacctcagtaacgta
gtgaggaaccgtgcagagcaagttggtcgacatggcagtactttcaaagaactgcagcta
cttatggcccctttggattactaa
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