Ictalurus furcatus (blue catfish): 128613388
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Entry
128613388 CDS
T09387
Symbol
caprin1a
Name
(RefSeq) caprin-1a
KO
K18743
caprin-1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128613388 (caprin1a)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
128613388 (caprin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
128613388
NCBI-ProteinID:
XP_053490078
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All DBs
Position
10:complement(30591912..30603486)
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AA seq
718 aa
AA seq
DB search
MPSATTGDYAVQSSSPELGSAPVSAPTEALKQVLNIIEKKVRNMEKRKSKLEDYKTRKSK
GERLNQDQLDALSKAQEVAHNLEFARELLKSFSSLNVEIQKAVKKTARREQLKRDEAEQR
RLKAVLEVQYVLDQLGEESVRQELRQVERGTDGPLLTEAELTGLDDFYKLVGPERDPNIR
LTDQFEEASVHLWELLEGRDKAVAGTTYKALKETLDKVLLSGYFDQTQTSHQNGVCEEEE
EEQQQQQQQKPPPPQQQQQPAPAPAESAECEEQPAEPEGSVTQEFTEPIEVEATEFVNRK
FIPEATYNTSPEKEQGGEWAVSPEIVSSLQQQQQQPPQPQQPPSSMSPALVSSEAHSLAP
VLSPASADPLVRKQAVQDLMAQMQGTYNFMQDSMLEFDGQSLDPAIVSAQPMKSAQMVCA
PAHTETRLPQHSTVPVHPEPTQVPMVTPPTEAYASTPPLYQPPHSTDPRPQPDPIDPLQV
SMPLSSEQPPAPSSQPQAFQSVSKPLHSGINVNAAPFQSMQAVFNLNAPVPPSNELESQK
MSSQYQSTYTQSFSSQPTHSVEQQELQQEPLQSVVGAFHSQDQGIPSSGGHQSMSQQPSG
QGAGFGRQPQSFYGSRAMPRGGPRNARGAMNGYRGPSNGFRGGYDGYRAPFPNTPNTGYG
QTQFSTPRDYSSSTYQREGYQQSFKRGAAQGARGSSRGRGGLYKPGRGMSTMAAVQTS
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgcaaccactggtgactatgctgttcagtcctccagtccagagctgggctct
gctcctgtctcggctcctaccgaggccctgaagcaagtgctgaacatcatcgagaagaag
gtccgcaacatggagaagagaaagtccaagctggaagactacaagacacggaagagcaaa
ggagagcggctaaatcaggatcagctggacgctttgtccaaagctcaggaggtggcacac
aacttggagtttgcccgggagcttctgaagagcttctcgtctttaaacgtcgagatccag
aaggcggtgaagaagacggcgcggcgggagcagctgaagcgcgatgaggctgagcagcgg
cgcctgaaggctgtgctggaggttcagtacgttctggaccagctcggcgaggagagcgtg
aggcaggagctgaggcaggtggaacgggggaccgacgggcctctgctcaccgaagccgag
cttacgggactcgacgacttctacaagctggtcggccctgagagggaccccaacatcagg
ctgactgatcagttcgaggaggcgtccgtgcatttgtgggagttgctggaaggaagagac
aaagctgtggcaggaaccacgtacaaggcccttaaggagactttggacaaggtactgctc
agcggttacttcgaccagacgcaaacttcgcaccagaacggtgtgtgtgaggaagaggag
gaggaacaacaacagcagcagcagcagaagccgccgccgccgcagcagcagcagcaacct
gctcctgcccctgccgagtcagcggagtgtgaggagcagccggcggagccagaagggtcg
gtcactcaagaattcacggagcccattgaagtggaagcaacagagtttgtaaaccgaaag
ttcattccagaagccacttataacaccagtcctgaaaaagagcaaggaggggaatgggcc
gtaagccccgagatcgtaagctccctccagcagcagcagcagcagcctcctcagcctcag
cagcctccttcctcgatgagcccggctctggtgagctcggaggcccactcgctcgccccc
gtcctctctcccgcctcggctgacccgctggtcaggaagcaggccgtgcaggacctcatg
gcacagatgcagggcacctacaacttcatgcaggactccatgctggagtttgacggacag
tctctggatcccgccatcgtatccgctcagcctatgaagtctgcacagatggtctgcgct
ccagctcacacagaaacccgactccctcaacacagtacagttcctgtacatccagaaccc
acacaagttcccatggtgacccctcccaccgaagcgtacgcctctacgccgccgctctac
cagcctcctcacagcacagaccctcggcctcagcccgaccccatcgaccctctccaggtg
tccatgcccctgtcgtcggagcagccccccgccccgtcgtctcaaccccaggcctttcag
tccgtctcgaaacccctgcacagtggcatcaacgtcaacgccgcaccattccagtccatg
caagcggtgtttaatctgaacgccccagttcctccctcgaatgagctggagtctcagaag
atgtcgagtcagtatcagagcacttacacccagagcttcagcagccagcctacacactcg
gtggagcagcaggagcttcagcaggaacctctccagtcagttgtcggagcgttccactct
caagaccaagggattccttcctctgggggccaccagtcgatgagccagcagccgtcgggt
cagggtgcggggttcgggcgccagcctcagtctttctacggcagccgagccatgccacgt
ggaggtccccggaacgccagaggggccatgaacggataccgcggaccatccaacggcttc
agaggtggatatgacggctatcgcgctccttttcccaacactcccaacactggttatgga
caaacccagttcagcactccacgggactactcgagcagcacctaccagcgggaaggatat
cagcagagcttcaagagaggagctgcccagggagctcgaggtagctctcgaggacgaggc
ggactgtacaaacccggccgagggatgagcaccatggctgctgtccagactagctaa
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