Ictalurus furcatus (blue catfish): 128613401
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Entry
128613401 CDS
T09387
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu02010
ABC transporters
ifu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128613401 (abca7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128613401 (abca7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ifu02000
]
128613401 (abca7)
Transporters [BR:
ifu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
128613401 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
128613401
NCBI-ProteinID:
XP_053490098
LinkDB
All DBs
Position
10:complement(9998768..10027782)
Genome browser
AA seq
2285 aa
AA seq
DB search
MAIGTQLLLLLWKNLTYRRRNKIQLIIELLWPLFLFFILIAVRHSHPPYMHSQCHFPNKA
LPSAGTLAWVQGIVCNINNPCFHYPTPGETPGEVENFNNSLLSRLFVDGRTILNNFGNQT
TLSALENFSLAVQRLGERQEAWPNLPVGEYLRANETFSSFLWTNCSLPASAVDQLLRAQL
NLQVVSLAGAGMRLSDIVCNATLLERYLTVEGNSSFTELQQSLCAVPSDLLQQAEQIFLS
QLNFSRIFTRERLHSNAAEVRLLSQAVSSVAQEFTSLLNDVSALSSFTELNAELRLFFPA
NSSVLPRESFRAFSRIVCGHPEVGGEKIPSFNWYEDHDIKSFLGKDGTEENDLGNDNTTT
PFCKNVIQTLESNPLSRIVWRGIKPLFIGKLLYTPDNPATQSIMKEVNKTFQDFEILAEV
HAAWEEVGPRLKRFMESSVEIRMLQDLLNRPEVAVVVNLQLRNTSWTASRIAHFLSMPNP
DTPEKEGAPATWLDVYQDFNSTISLLSQLTKCFSLNKLEGVATEGQLVERALELLEDRQF
WAGIVFLLPDPSSSDLPPHVKYKIRMDIDDVTRTSKIKDKFWDPGPAAEPFSDLRYIWGG
FVYVQDLVERAITRVLSGKQPTTGIYIQQMPYPCFVDDVFLRVLNRSLPLFMTLAWIYSV
AMIIKGVVYEKEARLKETMKIMGLGSGTLWLSWFISSYLPFLFSSGLLITALKLGDILPY
SDPAVIFFFLVAFATATIMLCFLISTFFSRANLAAACGGLIYFSLYLPYVLCVAWREYLT
STHRILASFLSPVAFGFGCEYFSQYEEQGVGIQWFNLLSSPTEGDEYNFTTSIIMLYVDA
FIYGVATWYIEAVFPGQYGIPRPWYFIFQLNYWGGVPLEADMPIPLVPCDQPDNQIEQEP
SQLVLGVAIHDLVKIYKKGAKLAVNHLSLKFYEGQITSFLGHNGAGKTTTMSILTGLFPP
TAGTVYIKGRDIRTDMDIIRRTLGVCPQHNVLFPMLTVEEHVWFYGRLKGMSGVEVREEM
ATLLEDVGLMHKWHEQTRNLSGGMQRKLSVAIAFIGGSKVVVLDEPTAGVDPYARRGIWD
LLLKYRKDRTIILSTHYMDEADLLGDRIAIISQGKLCCCGSPLFLKARLGTGYYLTVVKN
ERQSLTPSSSSAANLSASTLMKESDSSMSDDTGLGNEIYDSDVSGLVALAQHHISRARLV
ENVGREAVINFPQAASEDGTLALFLAELEKRQSEFGIVSYGLSDTTLEEIFLKVADETGV
DADPEGGEREAPEDRDTDANETDPLSSNVQGGMTVTGWRLTWQQLRALFTKRLKYALRSH
RGFTAQIVLPAVFVLVALLFSLIVPPFGKYPPLELQPWMYGKQYTFFSNDAPENPEIQNL
LDSLLDPPGFGTKCMESDREPQCEVSEAATVFLRPQISYTAWQLFNNGNWTVEHPSPGCE
CSTEDVRRMLPECPEGAGGLPPPQMKRLTGDLLQNLTGRNISDYLIKTYPQILKKSMKTK
KWVNEFRYGGFSLGSKRSQGQTDIRQLEQSVKAIRTRYKIAQNSSLDQLMDRLPGLLTGL
SSQNNVKVWFNNKGWHAMVSFVNIMNNALLRASLPPGPDRGKHGITAYNHPLNLTKEQLT
ELALMTTSVDVLVSICVMFAMSFVPASFVLFLIEERVSKSKHLQFVSGVKPILYWTANFA
WDMLNYTVPATMVVLIFISFQQQSYVSEKNLPALVLLLLLYGWSITPLMYPASFVFSVPS
TAYVVLTSINLFIGINGSIATFVLELFVDEHLNEVNRILKKVFLVFPHFCLGRGLIDMAK
NQAMADAFQRLGNKQTLEPLAWDFVGKNLFAMAVEGIVFFIFTVLLQYKFFIHFRLWSEP
DLPPLGPEDEDVANERERVKSNKTQKDILTVRDLSKVYKAGKRPAVNQLCLSIPRKECFG
LLGVNGAGKTSTFRMLTGDTTITYGDAFLDGYSVLKDMDRVHQLMGYCPQFDAINDLLTG
REHLEFYARLRGVPEPYVAKVSQWGVKKLGLTQYAEQEAGGYSGGNKRKLSTAISLIGAP
PVVFLDEPTTGMDPKAKRFLWNCILSVIKEGRAVVLTSHSMEECEALCTRMAIMVNGRFQ
CLGSVQHLKNRFGDGYTVILRLPASAPDPGAMDAYIKSCFPGIELKERHHNVLHYQLPTR
ACSLAHVFSVLSSNRKELRIAEYSVSQTTLDQVFVNFAKEQMDDDDRLREVAINRGSDAA
RSRTPRSSQPGAAGSTTKESKCSETKRPQQIEMQPLVDFSANGLTCTEEENSPSKDLTEL
FVVKT
NT seq
6858 nt
NT seq
+upstream
nt +downstream
nt
atggccatagggacccagctcttactcctgctgtggaagaaccttacctaccgcaggagg
aacaagatccagctgatcatagagctgctttggccactcttcctgttcttcatcctcatc
gctgtacgtcactctcaccctccctacatgcacagccagtgtcacttccccaacaaagct
ctcccatctgccggcactctagcatgggttcagggcatcgtctgcaacatcaacaatccg
tgcttccactacccgactccaggggagacgccgggtgaagtggaaaattttaataactca
ctactttctcgactattcgtggatggcaggaccattctcaacaactttggcaatcagaca
accctctcagccttagagaacttctcgcttgctgttcagagactaggcgagaggcaggaa
gcttggccaaatctgccagtgggagagtacctaagagccaatgagacattctcttccttt
ttatggaccaactgcagccttcctgcttcagctgtagaccagttactgagagcacaactc
aacctccaggtggtgtcgctggcaggtgctgggatgcgtctgtctgatatcgtctgtaat
gccacgctcctggaacgctacctcacagtggaaggaaattcctcattcaccgagctgcag
cagtccttgtgtgctgttccctcggatttgctgcagcaggcagagcaaatcttcctttca
caactgaacttcagcaggattttcacaagggagcgactccactccaatgctgctgaagtg
cgtctgctcagccaggctgtctcctctgtggctcaggagttcacctcacttttgaatgat
gtatctgctttatccagcttcacggagctgaatgcagaactgaggctgttttttccagcg
aatagctcagtgctacctcgtgagagtttccgagctttctccaggattgtgtgcgggcat
cccgaggtgggcggtgagaagattccttcctttaactggtatgaagaccatgacatcaag
tccttcttgggtaaagacgggacagaggaaaatgacttgggaaatgacaacactaccact
ccattctgtaaaaacgtgattcaaacccttgagtcgaatcccctctctcgcattgtatgg
agaggcattaaaccgcttttcattgggaaacttctctacacgccggataatcctgctaca
cagagcatcatgaaagaggtgaacaagacattccaggactttgagattctggccgaggtg
cacgccgcatgggaggaagtgggacccaggctgaagcgcttcatggaaagcagtgtggag
atccgtatgctgcaggatttgttgaatcgacccgaggtggctgttgtggtgaatctacaa
ctgaggaacacttcttggacagcttctcgcattgcccacttcctctccatgcctaatcca
gacactcctgagaaagaaggagcgcccgctacatggctggacgtgtatcaagatttcaat
agcaccataagcctcttgtcccaactcacaaagtgtttttcactgaataagctggaggga
gtggccacagaagggcagctggtggagcgggcgttggagctgctggaggatcggcagttc
tgggctggaatagtcttcctcctcccagacccttcctcctcagatcttcctcctcatgtc
aagtacaagatccgcatggacatagatgacgtcacacgcaccagtaagatcaaagacaag
ttctgggatcctggtccagcggcagaacccttcagcgatctgcgctacatatggggcggc
tttgtctatgtacaggatttagtggagcgagcaataacacgtgtgctgagtggcaaacaa
ccaactacaggaatatatatacagcagatgccctacccatgctttgttgatgatgtcttt
ctgcgagtcttgaatcgttcactccctctcttcatgacactggcgtggatatactcagtg
gcgatgatcattaaaggcgtggtgtatgagaaggaggcacgactgaaggagactatgaag
atcatgggcttgggctcgggaacactctggctcagctggttcatcagcagttacctgcct
tttctcttcagctctggccttctcattactgcactcaagttgggcgatatcttgccctac
agcgaccctgcagtgatcttcttcttcctggtcgcctttgctacagccacaatcatgttg
tgcttcctcatcagcacgttcttctctcgtgccaatctggcagcagcctgcggaggcctc
atctacttctctctctacctgccctatgtgctctgtgtggcctggagggaatatctgacc
agcacacacagaatcctagcaagcttcctctctccagtagcctttggatttggctgtgag
tacttctctcaatatgaagagcaaggagtgggtattcagtggttcaatcttctgtccagt
cctactgaaggagacgaatacaacttcactacctcaatcataatgctgtatgtggatgcc
ttcatctatggagtggccacttggtacattgaagctgtgtttccagggcagtatggaatt
cccaggccttggtatttcatcttccagttaaattactggggaggagtaccactggaggct
gacatgcccattcctcttgtaccatgtgatcaaccagacaatcaaatcgaacaggaacct
tctcagcttgtccttggagtagcgatacatgacttggtgaaaatttataaaaaaggggcc
aagcttgctgtcaatcatctgagcctcaagttctatgagggccagatcacgtcattcctg
ggtcacaacggagctggcaagacaacgacgatgtctattctgactgggctgttcccaccg
actgctggtacagtttacataaagggcagagacattcgcacggacatggacatcatccgt
agaactctgggagtgtgtccacaacacaatgttcttttcccaatgcttactgttgaagag
cacgtgtggttctatggccgtcttaaaggcatgagcggtgttgaggttagagaggagatg
gccaccctgctggaggatgtgggactgatgcacaaatggcacgagcagaccaggaacctc
tcaggcggcatgcagagaaagctctcagtagctatagccttcataggaggttctaaagtc
gttgtcttggatgagcccactgccggagtggacccttatgcacgacgtgggatctgggac
ctactactcaaataccgcaaagaccgtaccatcattttgtctacacattacatggatgag
gctgatctcctgggcgaccgcatcgccatcatctctcaggggaagctgtgctgctgcggc
tcgccactcttcctaaaagctcgtctgggcacgggatattacctcaccgtcgtgaagaac
gagcgccagagtctcacaccaagcagttcgagtgccgccaatctctcagcatctacgcta
atgaaggagagtgattcttccatgagtgatgacactggacttggaaatgagatctatgac
tcggatgtgagtggtcttgtggctcttgcccaacaccacatttcgagggctcggctagtg
gaaaatgtgggcagagaggcagtaatcaacttcccccaagctgcctcggaggatggcact
ctcgctcttttcttggcagagctggagaaacgtcagagcgagtttggcatcgtcagttat
gggctctcagataccacactagaggagatctttctgaaggtagctgacgagacgggagta
gatgctgacccagaaggaggtgagagagaagcacctgaggacagagacacagatgctaat
gaaacggacccgctgagtagtaatgttcagggtggcatgactgtcacaggctggaggctg
acctggcagcagctccgtgcactctttaccaaaaggctaaagtacgccctccgcagccac
cgaggtttcacagcacagattgtgctacctgcagtgtttgtcctggtggctctgctgttc
agcctcattgtcccaccctttggaaagtatccccctcttgagctgcagccatggatgtac
ggcaaacagtacactttctttagcaatgatgccccagagaaccctgaaatccagaatctc
cttgattctcttctggatccgcctggattcgggaccaaatgcatggagtcagacagggag
ccccagtgtgaggtcagtgaggcggcgacagtgtttctgcgaccccagatttcctacacc
gcatggcagctttttaacaacggcaactggacagttgagcacccttctcctgggtgcgaa
tgcagcactgaggatgttcgcagaatgctacctgaatgtccagagggagcaggaggcttg
cctcctccccagatgaaaagattgacaggtgacctgctgcagaatctgactggccgtaat
atttctgactacctcatcaagacttatccacagattctgaaaaaaagcatgaagactaaa
aagtgggtgaatgagttcaggtatggaggattctctctgggcagtaaaaggtcacagggt
cagacagacattcgtcagctagagcagtctgtaaaggctatcagaacacgctataaaata
gcacagaacagctcactggatcaacttatggacagattaccaggccttcttactgggctt
agtagccaaaacaatgttaaggtgtggtttaataataaaggttggcatgccatggtatca
tttgtgaacatcatgaacaacgccctgctccgtgccagtcttcctccaggaccagacaga
gggaaacatggaataacagcctataatcatccacttaacctcaccaaggaacagctcacc
gagttggccttaatgaccacctcagtcgatgtcctggtgtccatctgtgtgatgttcgct
atgtcctttgtaccggcaagttttgtactgtttctgatcgaggagagggtcagcaagtct
aagcaccttcagtttgttagtggggtcaaacccattctctattggactgcaaactttgct
tgggacatgttgaactacacggttccagctaccatggtggtcctcatcttcataagcttc
caacagcagtcttatgtctctgaaaaaaaccttcctgcactagtgctgcttctcttgctc
tatggttggtccatcactcccctgatgtaccctgcctcgttcgtgttctctgtgcccagc
acagcctatgtggtgctcacctccatcaaccttttcatcggcatcaatggcagcatagct
accttcgtccttgagctctttgttgatgaacatttaaatgaggtcaacaggatcctcaag
aaggtctttttggtctttcctcacttctgtctgggtcgagggcttattgacatggcgaaa
aaccaggcgatggcagatgctttccagaggcttggaaacaagcagacactggagccactg
gcatgggattttgtagggaagaacttgtttgcgatggcagtcgagggcattgtgttcttc
attttcactgtactgcttcagtacaagttcttcatacacttcaggctgtggtctgagcct
gacctgccaccactgggcccagaggatgaggacgtagcaaatgaaagagaacgtgtgaaa
agcaacaaaactcagaaggatattctgactgtcagagacctgagcaaggtctataaggca
ggcaagaggccagcagtgaaccagctttgtcttagcattcctcggaaagagtgctttggg
cttctcggggttaacggggctgggaagacttccacttttcgcatgctgacaggagacacc
accattacctatggagatgcttttctcgacggttacagtgtactgaaagacatggacaga
gtacatcagcttatgggctactgtcctcagtttgatgccatcaatgaccttttgactgga
agagagcacctagagttctacgctcgattgagaggagtccccgagccatatgtagcaaag
gtctcacagtggggagtgaaaaaactgggtttgacccagtacgctgagcaagaagcagga
ggatacagtggaggcaataaacgcaaactctcgaccgccatttctcttattggagcgcca
ccagttgtttttctggatgagcccacaacaggaatggatccaaaggctaagcgcttcttg
tggaactgtatcctcagcgtcatcaaagaaggccgagctgtcgtgctcacgtcccacagc
atggaggagtgtgaagctctctgcactcgcatggccatcatggtcaatgggaggttccag
tgcctgggttcagtgcagcacctcaagaacagatttggcgacggttatacagttattctc
cgcttgcctgcatcagctccggatcccggcgccatggatgcctacatcaagagctgcttt
cctggaatcgagctgaaggagagacaccacaatgtcctgcattatcagctgccaactcgc
gcctgctccctcgctcatgtgttcagcgttctgtcaagcaacagaaaagagctgagaata
gcggaatattcggtctctcagacaacactggaccaggtgtttgtcaactttgccaaggag
cagatggacgacgatgaccgactgagagaggtggctataaacagaggatcagatgcagct
cgatcccgcacacctcgatccagccagccaggagctgcaggatcaacgactaaagagagc
aaatgtagcgaaacaaaacggcctcagcaaatagaaatgcagcctctagtggatttctca
gcgaatggattaacgtgcacagaagaagagaattctccgagtaaagacctcaccgagctt
tttgtcgtcaagacatga
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integrated database retrieval system
