Ictalurus furcatus (blue catfish): 128613429
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Entry
128613429 CDS
T09387
Symbol
pkd1l2a
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ifu04040
]
128613429 (pkd1l2a)
04091 Lectins [BR:
ifu04091
]
128613429 (pkd1l2a)
Ion channels [BR:
ifu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128613429 (pkd1l2a)
Lectins [BR:
ifu04091
]
C-Type lectins
Others
128613429 (pkd1l2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
Lectin_C
SUEL_Lectin
GPS
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
128613429
NCBI-ProteinID:
XP_053490144
LinkDB
All DBs
Position
10:25192787..25218012
Genome browser
AA seq
2512 aa
AA seq
DB search
MNTHLLSTLLLLVVLNVSAIYSEEDTETLLCLAHQKTFEGSCYEFVTLQRSFLEAQSWCE
RGGGHLAFIQNDEMQQFLQRHLQLEQDWWLGLAPASFNLSMGSAATEGSLSWLDGSDVSY
SNWLREPEIGEACGYILKESGFQWASTKNCSQEFHFICEFESGHGLACIDHNATLQCGSG
QVIEIDDSFYGRKSLHYCRAGRSVPHTSLQEECSWVDVVDTVSGHCHGLQVCQAVADVAL
FGEPCPGLGSYLSVDYHCKDGLHLLINKQAAVFDNVTLTIKWLLHPFQGNLTCTLNAGDG
HTIDPYMPENYVVHRYQHAGVYTVTVECSTSEWHVTAQKTITIQEPVGEFNTIVCHSSNQ
TTDRENCKGLNHHALRIQVQLSAGTNVTYKIQRGITELVRSSEVRGIIRHNITIPQEALQ
LLGLGCHQLTLLASNGVTTPDVSATLELCLVEPVAGLQASVAPEQDLCSDSALYVNVSLD
HGTPVEVLFLVSGDNSSFSETHHMLNGSLQMFRVSSKIEGSVDIVVRAWNLFSSVEVDAG
DTLLDCQVDNSTEDHMGGLTGNNLMITANPENPVIGMSSIMLRVSGLNGNAELYTFAWNC
SKWSFIKIKIQSALHAYLDATPFSDHTIKNNGIGIHCHFFFFQVELVPVMSVLRLTHQIS
ATCLPPPYSFSIYSVTATKAAGQLEERTASKCISVSPGNDFNPVITCSNCDPVNVNANVK
LQLQCEGCQQIVWYFEDTNPVPDVLSSCFNEKAQKALIKQKEGVSSFVIESATLVNADQN
INVVAYGVRDGLSGATEFTIPIFGASSTLFPSLLPDSQATNGQLASQLQTQVFPPPSCNI
NPTVGDILSPFNITCTVAPSFCKAGPCMYCFRTSTGVYLYCGHNQMVESFFLPVGSDGNY
SLVVAITVENVEGEKINTTLSVQVNDASIGNTVEDLQSFVSKQMDQLLQLGKLTGATLAQ
MFQPVSNKLNGDTTEGQEQDAKMKLREQMLLDLGRAVNTAPLRNPSEVQKTADAVMGLTT
QSEELTSTSKLEASSLLSNLSMSLVSFTLSEGGDKEVTRQAVTSIIQATSNILKVSASTD
QQEIISENVLNAADNVQSVLLAGASIDQEPIIVSTSEISVYVNRVSPVALQKQSLRIGYN
SSASFVLPSLGPNVLPLEEPVDVRMLSFAINPFPWREGEPINGAVASLSITRKNGSVIPV
SNLSEEIEIILPRPEAEVNSTFLDLGNYSTLVINVTKPNISLVLKLDPSEEIPLHLLLGF
EHYPNNTHYKTTLQLPQPGNSAEERYAWVLDPRDIALEVGVYYLLVRPIGQAGVNSLNAS
VYITSIAAQCKYWDETVTNWSDSGCRVGPRTTPLLTQCLCTHLTFFGSSFFVMPNLVDVS
RTAELFATFVSNPVVVCFVGAIFLLYLIVVVWARRKDIQDTAKVKVTVLEDNDPLAEYRY
LLTISTGHRRGASTSSQVTATLLGSEGESEPHHLTDSDKPVFDRGGTDMFLLTTPFSLGE
LQSIRLWHNNSGKHPAWYVNKAMVQDLETGQKWHFLCSSWLAIDVGDCTLDKVFPAATEM
DLKRFSNLFFMKTTKDFQDGHIWFSVINRPPSSNFTRVQRVSCCFSLLLCTMLTSIMFWG
IPTDPSEQTMDLGKIEFTWQQVMIGIQSSIIMFPINLLIVSIFRNTRPRERRTDQTPKQP
KTDSVKQGKTGRVSPTQPPSPQSDHREITPDAVVKDIKRIAQSLSKALRSPMPRIDPEKM
DINALLSLVEDIICQQNCIGGEFYSDASKKQFAISLGAVNLHERSPEQMPKQKHSIYRQY
LYKQLQNVEKELRLLGPSRFSKPESYIQAVLQVQGMKGLLEPYLSSSSSRDQVSSGSSLG
EGRSGDQKCCQKGLPWWFVFVGWILVAATSGVSAYFTMMYGLTYGMDRSISWLISMVVSF
FESLFITQPLKVLGFAVFFALVLKTVDQEECGDVPIEGALSSTDNPDGICIARRDSTCSF
YQPPPPSDIEKMRNNMIKEQKVFALIREILIYVGFLWMLLLVAYGQRDPNAYYLAQHIQQ
RFRNSTADSMNYKDVFTWANTTLINSVFGQQPGFITDGNSKLVGSARLRQVRVHKDSCKT
SSFMSRSIHDCNAPYSWEVEDMGSYGPGWNRSADVNASKSLLMPWRYQTQSRLRAHPIWG
GVAFYRGGGFVVDLGPNKQNARSLLQYLFDNTWVDKYTRAIFVEFTVYNANVNLFCIVTL
MFETTAVGAFQYRSDLQSVRLYQSTGGFHIFMMASEAIYFLFILYYMFQQGKLMKQHKWE
YFRSKWNVLELAIIILSWSALCVFIKRTLLGNRDIEYYRNHKDQHASFHETATADGVLGY
LIAFLVLLATVKLWHLLRLNPKLQMISATLRRAWNDISGFLIVMTIMLSAYSIACNLMYG
WKLYSYNTLLHAAKTIVSLQLGIFNYEEVLQYNPVLGAFVIGSCIIFMTFVVLNLFISVI
LVAFSEEQLHHKPSEEEEIVDLMLMKICSLLGIKVKKNQLPEEPKARPFAIS
NT seq
7539 nt
NT seq
+upstream
nt +downstream
nt
atgaatacacatcttctctccactctcctccttttggtcgttctcaatgtcagtgcaatc
tatagtgaagaagatacagaaactctgctctgtcttgcgcaccaaaaaacttttgaaggc
tcctgctatgagtttgtgaccctgcagcgtagcttcctcgaagctcaaagttggtgtgag
cgtggtggtggacacctggccttcatccagaatgatgagatgcagcagtttctccagaga
catttgcaattggagcaggactggtggctaggactggcgcctgcctccttcaacctcagc
atgggctcggctgccacagagggttccttgtcctggcttgatggatctgacgtgagttac
tcgaactggctccgtgaacctgagattggtgaagcttgtggttacatcttgaaggaatct
ggatttcagtgggcgtcgaccaaaaactgtagtcaagagttccactttatctgcgagttt
gagtcgggacatggtctagcctgtatagaccacaacgccacgctacagtgtggctctggt
caggttatagagattgatgacagcttctacggcaggaagagtctacactactgcagggcc
ggacgctctgttcctcatacatccttacaggaggagtgcagctgggtcgacgtggtggat
acggtgtcagggcactgccatgggttgcaggtatgccaagctgttgcagatgtagcattg
tttggagaaccttgtccaggactaggaagctatttatcagtggattatcactgcaaagat
ggacttcatttgctgattaataagcaagctgctgtctttgataacgtcaccttgactata
aagtggttgctccatcctttccaaggaaatctcacatgcactttgaatgctggtgatgga
cacaccatcgacccctacatgcctgagaattatgtagtgcacagataccaacacgctgga
gtctatactgttacagtagagtgtagcaccagtgagtggcacgtgacagctcagaaaacc
atcaccatccaagaacctgttggggaatttaacacaattgtgtgccacagctcaaaccag
acaacggacagggaaaactgcaaaggtcttaaccaccatgcgctgagaatccaagtgcag
ctcagtgctggtactaacgtcacatacaaaatccagcgtgggatcactgagcttgtccgc
tcttctgaagtcagagggatcattcgtcacaacatcactatccctcaagaagctttacag
cttttgggcttgggatgccatcaacttactctcctggcctccaatggagtgaccactcca
gatgtgtctgctactctggaactttgcttggtggagccagtggctggtcttcaagcctct
gtggcaccagaacaggatctgtgctcagactcagctctatatgttaatgtctccctggac
cacggtactccagttgaggtgctctttctggtctctggggataacagcagcttctccgag
acccatcacatgctaaatgggagtttacagatgttcagggtctccagcaaaatagaaggt
tctgttgatattgttgtcagggcgtggaacttgttttcatcagtggaagttgatgccgga
gacacactattggattgccaggtggacaactcaacagaagatcacatgggagggctaact
ggcaataacctgatgatcactgcaaaccctgagaacccagtcataggcatgagtagcata
atgttgcgtgttagtggcctaaatggaaatgctgaactttacacatttgcctggaactgc
agtaagtggtcatttattaaaataaaaatccagagtgctttacatgcctacctagatgca
actcccttttctgaccatacaataaagaataatggtattggaatccactgccatttcttt
ttctttcaggtggaacttgtccctgtaatgtcagtactcagactaacccatcagataagt
gctacatgtctccctccaccctacagtttttcaatctactctgtgaccgccacaaaggca
gcgggacagctagaggaacggacagcaagcaaatgcatctctgtgtctccagggaatgat
tttaatccagtgattacatgttccaactgtgacccagtgaatgtcaacgcaaacgttaag
ttgcagttgcagtgtgaaggctgtcagcaaattgtttggtactttgaggacacaaaccct
gtacctgatgttttgagttcctgctttaatgaaaaagcacagaaggcactgatcaaacag
aaggaaggtgtcagctcttttgtaattgagagtgcaactctagtcaatgcagatcagaat
ataaatgttgttgcttatggtgtaagagatggtttatctggagcgactgaattcaccatc
ccaatattcggtgcctcgtctactttgtttccatcattactacctgacagtcaagccaca
aatgggcagcttgcatcccaactccaaacccaggttttccctccaccgtcctgtaatatt
aaccccactgttggagacattctctctcccttcaacatcacatgcactgtggctccttca
ttctgcaaagctggaccctgcatgtactgcttcaggacatccactggtgtctacttgtac
tgtggccataaccagatggtggagtcattctttctccctgtggggagcgatggtaactac
agcctggttgtagcgatcactgttgagaatgtggaaggggagaagattaacacaacctta
tctgtccaggtaaatgatgctagcattgggaacacagtggaggatctgcagagctttgtg
tccaagcagatggaccagttgttgcagcttgggaagttgacaggggcaacattagcccag
atgttccagccggtgtctaataagctgaatggggacacaaccgagggccaagaacaagat
gcaaagatgaagctacgagagcagatgctgttagacctgggcagagctgtgaacactgcc
cccctcaggaacccttcagaagtgcaaaagacagctgatgctgtcatgggcctcactaca
cagagtgaagagctgacgtctacatctaagctagaggccagctcacttttgtcaaacctc
agtatgtccctggtgtctttcacactctctgaggggggtgacaaagaagtaacaaggcag
gcagtcacatccatcattcaggccaccagtaacatcctcaaagtgtctgccagcacagac
cagcaggaaatcatttcagaaaacgtgctaaatgcagcggacaacgtccagagtgtgctg
ctagctggtgcgagcatagaccaagagcccatcattgttagcacctccgaaatcagtgtg
tatgtaaacagagtgtcaccagtggcacttcagaaacagtccttaagaattggatacaac
agctcagccagctttgtgctcccgtctttggggcctaacgtgctgcctttagaagagcca
gtggatgtgcggatgctgagttttgcgataaaccctttcccctggagggaaggcgagccc
ataaatggagcggtagcatctctctccatcacccgaaagaatggatctgttatcccagta
tctaacctcagtgaggagatcgagattatcttaccaagaccagaggctgaagttaacagt
acatttctggacctggggaactacagtaccttggtcattaatgtgaccaagccaaacata
tctctggttttgaaattggacccctcagaagagatacctttacatttactcctggggttt
gaacactacccaaacaacactcactacaagaccacacttcagctccctcaaccaggaaat
tcagcagaagagaggtatgcatgggttctggaccccagggatatagcactagaagtaggg
gtttactatcttctggtgaggcctattggccaagcaggtgtaaactccttgaatgcctcg
gtgtacatcacgtcgatagctgctcagtgtaagtactgggatgagactgtaaccaactgg
agtgactctggctgcagggttggacctcgcaccacaccacttcttactcagtgcctgtgt
acacatttgacatttttcgggagttccttctttgtcatgccgaacctagtcgacgtgtcc
cgcactgctgaacttttcgccacgttcgtcagtaaccctgtggtggtgtgttttgtgggt
gccattttcctcctctacctcatagttgtggtttgggcgcgaagaaaggacatccaagac
acagcaaaggtcaaagttacagtgctagaggacaatgatcccttggctgaatatcgctac
ttactgaccatcagcactgggcatcgtcgaggagcttctacatcctctcaggttacagca
actctactaggctctgagggagaaagcgagccccatcatctaactgactcagacaagccg
gtatttgacagaggaggaacagacatgttcctcctcaccacgcctttctcacttggagag
ctgcagagcatccgattatggcataataattctgggaaacatcctgcttggtatgttaat
aaggcgatggtccaggacctggagacagggcagaagtggcatttcttatgtagttcatgg
ctggccattgatgtaggagactgcaccctggacaaagtgtttcctgcagcaacagagatg
gacttaaaaagatttagtaatctgttctttatgaaaaccacaaaggatttccaagatggt
catatttggttttctgtgatcaatcggccccccagcagtaacttcactcgagtgcagcgt
gtttcatgctgcttctctttgttgctctgcaccatgctgaccagtatcatgttctggggg
attcccactgacccctctgagcagaccatggatctgggtaagatcgagttcacttggcag
caagtgatgattggaatccagagctccattattatgttccccatcaaccttcttatcgtg
agcatcttcagaaacacccgaccaagggaacgaaggacagatcaaactcctaaacagcct
aagactgattctgttaagcaaggaaaaacaggacgggtgtcaccaacccaacctccttct
ccacaaagtgaccatagggagatcacaccagacgctgtagtcaaggatatcaaaaggata
gcccaatcactctccaaagctctgagaagccccatgccaaggatagaccctgagaaaatg
gatatcaacgctctcctgtcactagtcgaagatattatttgtcagcagaactgtatagga
ggcgagttttactctgatgcctccaaaaagcagtttgccatctctctgggggctgtaaat
cttcatgagaggagtcctgaacagatgccaaaacagaaacacagtatctacaggcagtat
ctctacaaacaactccagaatgtggagaaagagctgagactgctgggtccttcccggttc
tctaaaccagagagctacattcaggcagtgctgcaggttcagggcatgaaaggattgcta
gagccgtatctctcctccagctccagtagggaccaggtctcctccggctccagtctgggg
gagggccgcagcggtgatcagaagtgctgccagaaaggcttgccctggtggtttgtgttt
gttggctggattcttgttgcagccactagtggagtctcagcatatttcaccatgatgtat
gggctgacgtatggaatggatcgctctattagctggctcatttctatggttgtgtctttt
tttgagagcctcttcattacccagcctttgaaggtgcttggatttgcagtcttctttgct
ctagttctaaagacagttgatcaagaggaatgtggagatgttccaattgagggggctcta
tcaagtacagataatcctgatggcatatgcattgccaggagggacagcacatgcagtttc
tatcagcctcctccaccctctgatattgagaagatgaggaacaacatgatcaaagaacag
aaagtctttgcactcatcagagagattctcatttatgtgggcttcctctggatgctgctc
ctggtggcttacggtcagagagatccaaatgcttactacctcgctcaacatattcagcag
cgcttcaggaacagtactgctgacagcatgaactacaaagatgtgtttacctgggcgaac
accacgctcataaatagcgttttcggacaacaaccaggctttatcacagatggaaactcg
aagctcgtaggtagtgctcgactccggcaggtgcgagtgcacaaggactcctgcaagacc
tccagcttcatgagccgctccattcatgactgcaatgctccatactcttgggaggtggag
gacatggggtcctacggtccaggctggaacagatcggcagatgtaaacgcgtctaaaagt
ctcctcatgccatggcggtaccaaacccagtccagactcagggcgcatcctatctggggt
ggggtggctttctacagaggtgggggctttgttgtggacctggggcctaacaaacaaaac
gcaagaagtttgcttcagtacctttttgacaacacctgggtggacaaatacactcgggct
atctttgtggagtttacagtgtataacgctaatgtcaacctcttctgtattgtcacgctg
atgtttgagaccacagcagtgggagcattccagtatcgcagtgatctacaaagtgttcgc
ctttatcagtcaactggtggttttcatattttcatgatggcctccgaggccatctatttt
ctcttcattctttattacatgtttcagcagggcaagcttatgaagcagcacaagtgggaa
tatttcaggagcaagtggaatgttttggagctagccatcattattttaagctggagtgca
ttgtgtgttttcatcaagaggactctgttgggcaaccgggacattgagtactatcgaaac
cacaaagaccaacatgctagcttccatgaaaccgccacagcagatggagttcttggatac
ctaatagctttcctggttctgctggctacggtcaaactgtggcacctgctacgcctcaac
cctaaactgcaaatgatcagcgcaaccttgcgtcgggcatggaacgacatctctggcttc
ctcatcgtcatgacgattatgttatcggcgtactccatcgcttgtaatttaatgtacggt
tggaagctttattcatacaacactcttctacatgctgccaagaccatcgtaagcttacaa
ctggggatcttcaactatgaggaagttttgcagtacaatcctgttctgggtgcatttgtc
attggttcttgcatcatcttcatgacatttgtggttctgaacctatttatatccgttatc
ctggtggcattttctgaagaacagttacaccataagccgtccgaagaggaggaaatcgta
gatctgatgctgatgaagatatgcagtcttttgggaatcaaggtcaagaagaaccagtta
cctgaggaaccgaaagcaagaccgtttgccatatcataa
DBGET
integrated database retrieval system
