Ictalurus furcatus (blue catfish): 128613522
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Entry
128613522 CDS
T09387
Symbol
bmal1b
Name
(RefSeq) basic helix-loop-helix ARNT like 1b isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128613522 (bmal1b)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
128613522 (bmal1b)
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_INO2
PAS_2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
128613522
NCBI-ProteinID:
XP_053490348
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Position
10:complement(24792715..24816781)
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AA seq
630 aa
AA seq
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MNLCADLMADQRMDISSTMNDFMSPSSTELISSSISTSSMDYTRKRKGSSTDYQDSMDMD
KDKQIGRDCIDQHGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTV
LRMAVQHMKTLRGAANPYTEANYKPAFLSDDELKHLILKAADGFLFVVGCDRGKILFVSE
SVYKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTVPRERLIDAKTGLPVKTDITP
GPSRLCSGARRSFFCRMKSNRPLIKMEDKDFTSPCSKKKAADRKSFCTIHSTGYLKSWPP
MQKGLDEDNEPDNEGCNLSCLVAIGRLHPHIVPQPMNGDIRVKPTEYVSRHAIDGKFVFV
DQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMRDKINTNCYKFKVKDGSF
ITLRSRWFSFMNPWTKEVEYIVATNTVVSTGTRDGSDPSYLQLTASPRSMDSVLTADGSG
KRTLQTVPGIPGGTRAGAGKIGRMIAEEVMEIQRIRGSSPSSCGSSPLNITNSTPPPDTS
SPGGKKIQNGGTPDIPSAGMVSGQDSIGYPYSNNSLLSENSHISIGDIMDEPGSSSPSND
EAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttgtgctgatctcatggcagaccagagaatggacatctcctctacgatgaat
gacttcatgtctcccagctccactgagctgatcagcagttccatcagcacgtcctccatg
gactacacccgcaagaggaaaggcagctccaccgactaccaggacagtatggatatggac
aaggacaagcaaattggaagggattgtattgatcaacacgggcggataaagaatgccagg
gaggctcacagtcagattgagaagcgacgcagggacaaaatgaacagcttcattgacgag
ctggcttcactagtgcctacctgcaacgccatgtcccgcaaactagacaaactgactgta
ctgcgcatggccgtccagcacatgaaaacattacgaggtgctgcaaacccttacactgaa
gctaactacaaaccagcctttctgtcagatgatgaactgaaacacttgatactgaaggct
gctgacggctttctctttgtggtcggctgcgatcggggaaagattcttttcgtttctgag
tctgtatacaaaatcctgaactatagccaaaacgacttgattggccagagcttgtttgat
tatttgcatcctaaggacattgccaaagtcaaggagcagctgtcctcatctgacacggtg
ccaagggagcgactcattgatgccaaaactgggctgccggtaaaaactgacatcacgcca
gggccatccaggctgtgctctggggcccgccgttccttcttctgtagaatgaaaagtaac
agacctctcatcaaaatggaggacaaggacttcacctccccctgctccaaaaagaaagca
gccgaccgcaaaagcttctgcaccatccacagcacgggctatctgaagagctggccgccc
atgcagaagggcttggacgaggacaatgagcccgacaacgaaggctgcaatctgagctgc
ctggtggccatcggccgtttgcacccacacatcgttcctcagccaatgaatggggacatc
cgcgtcaaaccgacagagtatgtctcacgccacgccatcgacggaaaattcgtctttgtt
gaccagagggccactgccattctcgcctatctaccccaggagctgctggggacatctttc
tatgagtattttcatcaggatgacattggacaccttgctgaatgccacagacaagtgctg
cagatgcgagataagatcaacactaactgttacaagtttaaggttaaagatggctccttc
atcactctgagaagtcgctggttcagtttcatgaacccttggaccaaggaagtcgagtac
atcgtcgccacaaacacagtcgtctcgactggtacacgtgatggatctgatcccagctat
ctccagctcactgcctccccccggagcatggacagtgtcctcacagctgatggttctggg
aaacggactctgcagacagtgcctggcatcccagggggcacgagagccggagcgggcaag
atcggccgcatgatagcggaggaggtcatggagatccagaggataagaggctcatcaccc
tcgagctgtggctcgagcccgctgaacatcaccaacagcacaccccctccagacacatcg
tctcctgggggcaagaagattcagaatggtggaactccagacattccttcagcggggatg
gtatcaggccaggactccataggatacccttactcgaacaactcacttttaagcgagaat
tctcacatcagcatcggggacatcatggatgagcccggctccagcagccccagtaacgac
gaggcggccatggccgtcatcatgagtcttctggaggctgatgcaggactcggagggccc
gtggatttcagtgatctgccatggcctctgtga
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