Ictalurus furcatus (blue catfish): 128613539
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Entry
128613539 CDS
T09387
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifu03021
]
128613539 (ctr9)
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
128613539 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_6
TPR_7
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
128613539
NCBI-ProteinID:
XP_053490385
LinkDB
All DBs
Position
10:27866288..27881374
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AA seq
1151 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKDLINQSTLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GSLAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNPKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASATFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVL
LYLARALFKCGKLQECKQMLLRARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLSKAGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQDQERELLRQQLQREQEEKRIKEAEEQKKLLEQRTQYVEKTKNLLNFTDEMKESAK
EKKKGGGGGGRRKKGAEYDDFVNDDSDEELPIRKKKRKAPRSGSEQEEDDEDGEKKQRRK
RRRPKGGDDGSDEDEGGSRPKKQRKPRERKRIEKSKPERLPASLKGKIKSKAIISSSDSS
SDEDGLKIAEDRHRDSGSGSEDGGHQKRIASDSESDEERRHSANSEEDDSGSERPVKKRR
PQPQSDSEQSDNESKRSRSDGSEDESRPGSPAPVSEQASENEGSPQRSDNESEPEGSNNE
ASNRGSDDDSD
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggatccattgaaatccccttgcgggacacagacgaggtgattgagctggac
tttgatcagcttcctgaaggagatgaagtgatcagtatcctgaagcaggagcacacacag
ctgcacatatggatcgcgcttgctctggagtactacaagcaggggaagacggaggacttc
gtgaagctgctggaggcagcgcgtatcgacggaaacctcgactacagagaccacgagaag
gaccagatgacgtgtctggacactctcgctgcgtattacgtccagcaggcacgcaaagag
aagaacaaggatgcaaaaaaggacctcatcaatcagtcgacgctcctgtacacgatggcg
gataagatcatcatgtacgaccagaaccacttgttgggacgagcctgtttttgcctgctg
gaaggggacaagatggatcaggcagacgcccagtttcatttcgtcctgaaccagtccact
aacaacatccccgcgctgctgggtaaggcttgtatctccttcaacaaaaaggactacaga
ggatctttggcttactataaaaaagctctgcgcacaaaccccgggtgtccagctgaagtg
aggcttgggatgggtcactgctttgtgaagctgaacaagctggagaaagctcgtctagcc
ttcagccgcgccctcgagctcaacccgaagtgcgtgggagccctggtcggtctcgccgtc
ctcgagctcaacaacaaagaggctgactccatcaagaacggcgtgcagcttctctccaga
gcctacaccatcgacccgagcaaccccatggtgctcaaccacctggccaaccacttcttt
ttcaaaaaggattacagtaaagtccagcatttggcccttcatgcgttccacaacacggag
gtagaggccatgcaggcggagagctgctatcaactggctcgttccttccacgttcaggag
gactacgaccaggcttttcagtattactaccaggctacacagttcgcctcggccaccttt
gtgctgccgttcttcggcctgggacagatgtacgtgtatcgacgagacaaagaaaacgcc
gcgcagtgcttcgagaaggtcttgaaggcgtacccgaacaactacgaaaccatgaaaatt
ctcggttcgctttacgcaacgtcagacgaccaggaaaaaagagacatcgctaaaggccat
ctaaagaaagttactgagcagtatcctgacgatgtagaagcctggatcgaacttgctcag
attctggagcagacagacatccagggtgctctgtcggcatacggcacagccacacgtatt
ctccaggagaaggtacaagctgacgtcccccctgagatccttaacaatctgggggctctg
cacttcagactggggaaccttggagaagcaaagaaatacttcctggcctctctggagaga
gccaaagcggagggtgagcacgatgagcattactacaacgccatttccgttaccacctcc
tacaacctggcgcggctctacgaggccatgtgcgagttccacgaggctgagaagctctac
aagaacatcctgagagaacatccaaactacgtcgactgttacttgcgtctcggagcaatg
gcccgtgacaagggcaacttctacgaagcctcagactggtttaaagaagctcttcagatc
aaccaggaccacccagacgcttggtccctgatcggaaatctccacttggccaagcaggag
tggggtcccggccagaagaagttcgagcgtatcctgaagcagccgtctactcagaacgac
acgtactccatgctggcgctgggtaacgtctggctgcagacgctacaccagcccacgagg
gatcgagaaaaggaaaagaggcaccaggacagagctttggccatttataaacaagttctg
aggaacgattcgaagaatctgtatgctgccaacggtatcggagctgttttggcccacaag
ggttacttccgtgaagcacgtgacgtgttcgcgcaggtccgggaagccacagcggatatc
agtgacgtctggctgaacctggcgcacatttacgtggagcagaagcagtacatcagcgct
gtgcagatgtatgagaactgcctgaagaaattctacaagtaccagaacaccgaggtgctg
ctgtacctggctcgagcgctgtttaagtgcggaaagctgcaggagtgcaaacagatgctg
ctgagggcccgtcacgtggctcccagcgacacggtgttgatgttcaacgtggccttggtg
ctgcagcggctcgccactctggtgctgaaggacgagaagagcaacctgaaggccgtcctg
agtgcggtgaaggagctggagctcgctcacaggtacttcagctacctcagtaaagccgga
gacaagatgagattcgacttggcgctggctgcgagcgaagcaaggcagtgctctgacctg
ctgagtcaggcgcagtaccacgtggcccgcgcccgtaaacaggacgaggaggagaaggag
ctgcgagccaagcaggaccaggagcgagagctgctgaggcagcagctgcagcgcgagcag
gaggagaaacggatcaaggaggccgaggaacagaagaagctcctggagcagcgaacgcag
tacgtggagaagaccaagaacctcctcaacttcactgatgagatgaaggagtctgcgaaa
gagaagaagaaaggaggaggcggaggaggacggcgtaagaaaggagccgaatacgacgac
ttcgtcaacgacgactcggacgaagagctgcccatccggaagaagaagaggaaggcgcct
cgcagcgggagcgagcaagaggaagacgacgaagacggagagaagaagcagcgcaggaaa
aggaggagaccgaaaggtggtgacgacggaagtgacgaggacgagggcggctcgagaccg
aaaaaacagcgcaaacctcgagagcgcaagaggatcgagaaatccaaacccgagcgtctg
ccggcgtctcttaaaggaaagatcaaatccaaggccatcatttcctcctcggattcctct
tcggatgaggacgggctgaaaatagccgaggaccggcatcgggacagcggctcgggatcg
gaggacggaggccaccagaaacgcatcgcgtccgacagcgaatccgacgaagagcggcgc
cactcagccaactcggaagaggacgactccggcagcgagcggccggtgaagaagaggagg
ccgcagcctcagtccgattccgagcaatcggacaacgagagcaagagaagccgctcggac
ggttccgaggacgaatcccggcccggttctccagcgccggtctcagaacaggcctccgaa
aacgaaggatcgcctcagcgctccgataacgaatccgagcccgagggatccaacaacgag
gcctcaaacagaggctctgacgacgacagtgactga
DBGET
integrated database retrieval system
