Ictalurus furcatus (blue catfish): 128613563
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Entry
128613563 CDS
T09387
Name
(RefSeq) collagen alpha-6(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04510
Focal adhesion
ifu04512
ECM-receptor interaction
ifu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128613563
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128613563
09142 Cell motility
04820 Cytoskeleton in muscle cells
128613563
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ifu04147
]
128613563
00536 Glycosaminoglycan binding proteins [BR:
ifu00536
]
128613563
Exosome [BR:
ifu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128613563
Glycosaminoglycan binding proteins [BR:
ifu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128613563
Hyaluronan
Extracellular matrix or blood plasma proteins
128613563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_CoxE
vWA_SIBA-E
Copine
Motif
Other DBs
NCBI-GeneID:
128613563
NCBI-ProteinID:
XP_053490426
LinkDB
All DBs
Position
1:complement(25746329..25790637)
Genome browser
AA seq
2498 aa
AA seq
DB search
MGKLKGLLPLFILTSSFLVCSAQKTDVHKGCKANLADIVFLVDSSGSIGDADFLRMKTFL
RTFIEGLDIKPEKVRVGVAQFSNDPRQEFLLGEYADKNDLLAKVDKLTYLKGGTETGKAL
HFILDNYFIESAGSRINQNVPQIAVVITDGDSTDKTKSPAMDLQKKGVLIFAIGVGEVSI
TGLQSIANEPYHRFVLSFTEYEELLKATTSAVDKVCISMEAQQEALAPKYADVFVLVDST
VGQTQKVTQFLNRLATQLNVASTSNRMALAQFDEEVSVEFRFDAYKTKTEALALIRKFRL
RGTGQSQLGKAMDYVRTHLLSTEAGSRIAQGYKQYLLVVSRGESNDNIRIAVRALMDDEV
TLISVDFSKEQETDPQKPMIALPKRTIYAATKTPAEIVQDAKTIIETKEEIKVTGVCKSA
PVADIVFIVDVSDNITLPNSKLVRNFLHRMINGLEIKPDGMRVGMVLYSDIPTADFYLNT
FTDKTKLLQYINLLTFRGGESNTSKALKFAREKLFNKETGSRHALGVQQIAVVITNGDSL
DNVTYQAMQLRRSGVQVYALGVTKDNVQQLKELASYPSNRFVFTVESFDKLNTMEKILRK
TLCNNIARSSDKFISYSVGQGCIQTEEADIYFLIDQSSSIYPLYFEDMKKFILEFLQRFT
IGPKQVRVGVAKYSDDHTLEFSLNDYNDKDSLKKAVTNIDQKFGNTNTGKALSLMSPLFK
EAEKTRGTKVQEILIVITDGKSQDEVKEPAAQLRAQGVTIYAIGVKDANEQELLEIAGVQ
KRMYFVTNFDALKPLKDKIVTDICSDKACKNMQQADLIFLVDGSGSIYSKDFSKMKKFIN
TVVSNFTIGTGDVQFGVVQFSTSPKAEFALNKFSDKLQMQQAIKEMQQLGGGTMTGAALS
TLSEYFGPAQGGRPGTPQILIVITDGESQDAVAEPAQALRNKGITIYSIGVLNANITQLR
EISGTQDNVYLERDFDSLDYLDKELLLKICTSADDCQKSQVADIVFLVDDSISISNDGFN
SMKFFMSSVVNTTHVGKDSVRFCTILYSDTPQTKFPLYQYYSKREVQDAISNLKHLGGNT
YTAKALLYSLDYFSEANGGRGAKGVPQMLFVITDGEATDPHDLTKAANELQKYGVSVYGI
GVANAKTSELEVITKDKNKVFLVDDFEALKALQQNISSVICNNTKPECQKEAADLVILID
GSESIKEVPWKTMIKFMLSLIDNLRIRQDLFRVGVAQFSSNYRKEFYLNAYDDQVDVKRA
IQTIKQMKDGTNIGAALNQVQEFFHTSKGSRIQDGISQNLLLITDGESNDDVNDAADKLR
GRGIEMFVIGIGNISVPQLNYIAGSPDRVYIVDNFDQLKLNRTVQKVTSKICTPMDEAGC
TVDIGIGFDISHSSSSSQAIFSSQHKLPEIIRYISTLHNLCCLTHQRSLPTNIGFHLVAS
NGEILYDTNFEHYNKDIVMKVMSQMTQDLAFNTQLLRSFENKFAASGAGVKVVIIFTDGL
DESVDGLMVASENLKKSGVHALILVALEGVKSTTNLQKLEFGRGLGYNEPLMIGMQNVAS
DLQKQIDAVASRECCNVMCKCTGHEGVRGPRGPPGIKGFPGRNGHPGFPGEEGRFGERGP
PGQNGTKGHPGCQGERGLKGSRGYTGETGIYGELGIDGVNGEQGVTGLAGYPGEPGVPGS
QGKKGVRGDTGDPGQKGLRGDPGESGSDSIEPGPKGETGNPGLPGEQGPDGSPGMPGDTG
IPGQKGRRGPAGLPGASGTSGERGLRGTPGASGPQGPVGPPGDLGQKGIPGFPGPQGSPG
TPGNDGSKGSVGPRGQKGQPGEPGNKGAAGPLGSRGFPGNDGQDGYGLSGPKGQKGDRGF
PGYPGLQGQTGDPGRNGDDGPKGNRGRGGNSGRQGEEGDPGDVGPPGHRGHKGPPGTREM
STCQLIDYVRNNCVCCKDKAACPVYPTELVIGLDMSDDVTPALFDSMYATLLSLLDSINI
TENNCPTGTRVAVVSYSSNTKYLIRFSDHRHKKDLIEAVKNIPLERTSNRRNIGAAMRFV
GRNVFKRIRQGVLIRKVAIFLSGGQSQDVTSITTAVLEYKALDINLGVIGFRDTPNVQRA
FEADETGSFILSVLGKPDTQSAALEKIQRCIICFDPCNPARDCPKSSELTIPEQVNVDLA
LLVDGSRSIQADQYEGVKQVLGTVLDQLVVSRQPSKADRQARVALYQQSSSYREAQAPVK
QIFTFQQFQDRNLMKQSIFKNLQQTGGYSRLGHAMEFVIMQGLLTVSKPRKNKMVLLIVG
GETDSDIAKLDFISMKAKCQGVVLFTLLVGDHFNSTQVEELASFPTEQHIVHLGHVKQGD
QEYTRRFIRTFLHILSRDMNTYPALMLRKQCESLQQGHVLDVSEVTKRPPTERIPPPRIV
YPENSGEEYEETEEETEYAEQTGTQMEYENLDLLTLGHDKCYLKKDTGPCRNYVIKWFYD
QELNKCSRFVYGGCDGNLNRFDTQYECEAHCVELHTVQ
NT seq
7497 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaactaaaaggactgctgcctctcttcattttaacatcaagttttcttgtgtgc
agtgcacaaaaaacagatgtacacaaagggtgcaaggctaatttggctgacattgtgttc
cttgtggatagctctggtagcattggagatgcagacttcctgaggatgaagacattcttg
cgcacgttcatagagggtcttgatattaagcctgaaaaagtcagagtaggagtggcacag
tttagtaatgatccacggcaagagttcctgttgggggagtatgcagacaagaatgacctg
ctggcgaaggtagacaaactcacctacctaaaaggaggcactgagactggaaaagctctc
cactttattctagataattacttcatagaatcagctggcagtcggatcaatcaaaatgtg
cctcagattgctgtggtgatcacagacggtgactccactgataaaacgaagagtccagcc
atggaccttcagaaaaagggggtgttaatctttgccattggggttggtgaagtcagcatt
acaggcctgcagtccattgctaacgaaccatatcaccgttttgtactgagtttcactgaa
tatgaggagctgctgaaagcaaccaccagtgcagtagacaaagtatgtatttctatggag
gcccagcaagaagctctcgctccaaagtatgcagatgtctttgtgttggtggacagcaca
gttggacagacccaaaaggtgacacagttcctgaatcgcctagccactcaacttaacgtg
gcaagcacatctaatcggatggctttggctcagtttgatgaagaggtttcagtggaattt
cgttttgatgcttacaaaactaaaactgaagcacttgcacttatccgcaaattccgactc
agaggcactgggcagagccaacttggaaaagcgatggattatgtgcggactcacctgctc
agcactgaagcaggcagccgaattgctcagggctataagcagtacctgttggtggtaagc
agaggagaatcgaatgacaatatacgtattgcagttcgtgcattaatggatgatgaggtg
actcttattagtgttgacttcagcaaagagcaagaaactgatccacagaagcctatgatt
gcattgccaaaaagaaccatctacgccgcaacaaaaactcctgcagaaatcgtacaagat
gcgaagactatcattgaaactaaggaagagatcaaagtaactggagtttgcaagtcagct
ccagtggctgatatagtgtttattgtggatgtgtcagacaacatcacccttccaaactcc
aagctggtccgtaactttctccaccgaatgattaatggcttggagataaagcctgacggc
atgcgggtgggaatggtgctgtacagtgacatacccacagctgacttctacctaaatact
tttactgacaaaacaaagctcctgcagtacattaaccttttgaccttcaggggtggggaa
tccaataccagcaaagcccttaagtttgcaagagagaaactcttcaacaaggagacaggc
agccgacatgccttaggagtgcagcagattgctgtggtcataacaaatggggactcattg
gataatgtcacatatcaggctatgcagctaaggcgcagtggagtccaggtctatgccttg
ggagttacaaaagataatgtgcaacagctgaaagagcttgcatcttatccttccaatagg
tttgtgtttactgtggagagctttgataagcttaatacaatggaaaaaatactgaggaag
actctgtgtaacaacattgcccgttcgagtgacaagttcatttcatacagtgtagggcaa
ggatgtatccagacagaagaagcagacatctatttcctcattgaccaatcatcaagtatt
tatccattatactttgaggacatgaaaaagttcattcttgagtttctgcagaggtttact
attggaccaaaacaggtccgtgtgggtgtggcgaaatattcagatgaccacacattagaa
tttagcctgaatgattataatgacaaagactcccttaaaaaagctgtgaccaacattgac
cagaaatttgggaacacaaatacagggaaggctctgtctttaatgagcccactcttcaag
gaggctgaaaagactcgtggcactaaggttcaagaaattctcattgtcataactgatgga
aagtcccaggatgaagtgaaagagccagcagcacagctgcgagcacagggggtgaccatc
tatgccattggagtgaaagacgcaaatgagcaggagctccttgagatagcaggtgtccaa
aagaggatgtactttgtcaccaactttgatgcattgaaacccctcaaggacaaaattgtt
acagatatctgttcagataaggcctgcaagaacatgcagcaggcagatctcatctttttg
gttgatggttcggggagcatttactctaaggacttttccaagatgaagaaattcattaat
acagtagtttccaactttacaattggcacgggtgatgtacagttcggagtagtgcagttc
agcacaagcccaaaggctgaatttgccctcaacaaattttctgacaaactccagatgcag
caggccattaaggaaatgcagcagctgggcggtggcactatgactggggctgcactcagt
actttgtcagagtactttggtccagcacaagggggtcgtcccgggactccacagatcctt
attgtgatcacagatggtgaatctcaggatgccgttgctgagcctgcacaagccctcaga
aacaagggcattacaatatactccataggagtacttaatgctaacatcacacagctgcga
gagatcagcggaactcaggacaatgtttatctggaaagagattttgattcactggactac
ctagataaagagctcttacttaagatctgcacttctgctgatgattgccagaaatcacag
gtagcagatattgtcttcttagtggatgattccatcagcattagtaatgatggctttaac
agtatgaagtttttcatgagctcagtggtgaacactacacacgttggaaaagacagtgtc
cgtttttgtactattctttactcagacacccctcagaccaaatttcccctttatcagtac
tatagtaaacgagaagtgcaggatgctataagtaatctaaagcatcttggtgggaacaca
tacacagccaaggcactactttactcactggactactttagtgaagccaatggtgggaga
ggtgcaaaaggtgtcccacagatgctgtttgtcatcacggacggtgaagccacagaccca
catgatttaaccaaagctgctaatgagcttcagaaatatggagttagtgtttatggcatt
ggagtggccaatgcaaaaacaagcgagttagaagtcataaccaaagacaaaaacaaggtt
ttcctggttgatgactttgaagcgttgaaggccctgcaacaaaacatttccagtgtgatc
tgcaacaacacaaaaccagagtgtcagaaagaggcagctgatttggtcattttgattgac
gggtctgaaagtattaaagaggtgccttggaagaccatgatcaaatttatgcttagcctc
attgacaatcttcgcatcagacaagacctctttagagttggtgttgctcagtttagttca
aactacagaaaggaattttacttaaatgcatatgatgatcaagtggatgtgaagagggcc
attcagaccatcaagcaaatgaaagatggaacaaacattggagctgctttgaatcaagtt
caagagttcttccacaccagtaaagggagccgcattcaagatggaatttcacagaacctg
ctgttgatcactgatggagaatcaaatgatgacgtcaatgatgcagctgataaattgaga
ggcagggggattgagatgtttgtgattggaataggtaacatctcagtcccacaactcaac
tacattgctgggtcacctgacagggtttatattgtggacaattttgaccaactcaaatta
aatagaacagtacagaaggtgaccagtaaaatttgcactccgatggacgaagcaggttgc
actgtagatattggtattggatttgatatctcccatagtagttcaagctcacaagcaatc
tttagtagtcaacataagctgcctgagattatcagatacatctccactttgcacaacttg
tgctgtctaacccatcaacgttctcttccaaccaacattggtttccatttggttgcaagc
aatggcgagatactgtatgacacaaattttgaacactacaataaagatatagtgatgaag
gtgatgtctcaaatgactcaagatctggcttttaacacccagctcctgcgctcttttgag
aataagtttgctgcctctggagcaggtgtaaaggtagtgatcattttcactgatggcctg
gatgaatctgttgatggcctcatggttgcctcagagaatctcaagaaaagtggagtccat
gcgctgattctagtagcactggaaggagtcaaaagcaccacaaacctacagaagctggag
tttggacgaggattaggctacaatgagcctcttatgattggcatgcaaaatgtggccagt
gatctccagaagcagattgatgctgtggcctcacgagagtgctgtaatgtgatgtgtaaa
tgtactggtcatgaaggggtgagaggaccgagaggacctccagggataaagggctttcct
ggaaggaatgggcatcctggatttcctggagaagaaggaagatttggagagagggggcca
ccaggtcagaatggaaccaaaggacatccaggctgccaaggggaaagaggtctaaagggt
agtagaggctacacaggtgaaacaggaatatatggagagcttggtatagatggagtaaat
ggagaacagggtgtgactggattagcaggatacccaggagagccaggcgttccaggcagc
caaggcaagaagggtgtcagaggagatacaggtgacccgggacaaaaaggactaagagga
gatccgggtgagtcaggctctgacagcatagaacctggtcctaagggtgagactggaaac
ccaggcctaccgggtgagcaagggccagatggaagcccaggcatgcctggagatactggc
attcctggtcaaaagggaagacgaggtcctgcaggtctaccaggtgcttcaggaacttcc
ggagaacgaggattaagaggaacccctggagcttcagggccacaggggccagtgggtcct
cctggtgatttaggacagaaagggatacctggttttccaggacctcagggttcacctggc
acaccaggaaatgatggatcaaaaggaagtgtaggacccaggggacaaaagggtcagcca
ggggaacctggcaataaaggagcagctgggccactagggagcagaggctttccaggaaat
gatggtcaagatggatatgggttatcaggacctaaaggacagaagggagatcgtggtttt
ccaggatatcctggactacagggtcaaactggagatcctgggagaaatggagatgatggt
cctaaaggcaacagaggaagagggggaaattcaggcaggcagggagaagagggtgacccc
ggtgatgtcggaccacctggtcacaggggccataaaggaccaccaggaacaagagaaatg
tctacttgtcaactgatcgactacgtacgcaacaactgtgtctgctgtaaagataaagca
gcttgccctgtctaccccactgaactggtgattggtttggacatgtctgatgacgtgact
cctgcattatttgatagcatgtacgcgactcttctttctctgctggacagcatcaatatc
actgaaaacaactgtcccacagggacacgagtggctgtggtctcttacagttctaacacc
aagtacctcatccgtttttctgaccatcgtcataagaaggacttgattgaagctgtgaag
aacatccctctggaacgtacatccaacagacgcaacattggtgcagccatgcgctttgtg
ggcagaaatgtcttcaaacgtattcgtcagggtgttctgatcaggaaggtggcgatcttc
ctctctggtggacagtcccaggatgtgacatccataaccacggctgttctagaatacaag
gctctggatataaaccttggtgttattggttttagggatactcctaatgttcagcgtgct
tttgaggctgatgagacaggaagttttattttgtctgtgctgggcaaaccagatacccag
agtgcagcccttgaaaagatccagcgatgtatcatctgctttgatccttgcaatccagct
agagattgtcccaagtccagtgagttgaccattccagagcaggtaaatgtggacctggca
ttgctggtggatggttcccgcagcatccaggcagatcagtatgagggcgtgaagcaggtg
ttgggcactgtgttggaccagcttgtagtgagccgtcagcccagcaaagctgacagacag
gcacgggtggcgctttaccagcagagttcatcatacagagaggcccaggctccagtcaag
cagatcttcactttccagcagttccaagaccgcaacctgatgaagcagagtatcttcaaa
aatctacagcagactggtggctactccaggctgggtcatgccatggaattcgtaatcatg
cagggtcttctcactgtttccaagcctcgaaaaaacaagatggtgctgcttatagttgga
ggagaaaccgattctgatatagcaaaactggactttatctccatgaaagcaaagtgtcag
ggtgtggtgcttttcactcttttagtcggggatcattttaacagcactcaggtggaggag
cttgccagctttcccacagagcagcacatagttcacttgggccatgtaaagcaaggagac
caagagtacactcggcgcttcataaggactttcctacacattctgagccgggatatgaac
acctaccctgctctgatgctaagaaaacaatgtgagagtcttcagcaaggtcatgtcctt
gatgtctctgaggttactaagaggccacccactgaaaggatccctcccccaagaatagtt
taccctgagaattcaggggaagaatatgaggagacggaagaagagacagaatatgctgaa
cagacagggacacagatggagtatgaaaatttggacctgctgactctaggacatgataag
tgctatctgaaaaaagacacagggccctgcaggaactatgtaatcaaatggttctatgac
caagagctgaacaaatgctctcgctttgtttatggaggatgtgatgggaaccttaacaga
tttgacactcagtatgaatgtgaagcccactgtgtagagcttcatactgtacagtga
DBGET
integrated database retrieval system
