Ictalurus furcatus (blue catfish): 128613598
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Entry
128613598 CDS
T09387
Symbol
polrmt
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ifu03029
]
128613598 (polrmt)
Enzymes [BR:
ifu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
128613598 (polrmt)
Mitochondrial biogenesis [BR:
ifu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
128613598 (polrmt)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
PPR_3
PPR_long
Motif
Other DBs
NCBI-GeneID:
128613598
NCBI-ProteinID:
XP_053490476
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All DBs
Position
10:13784726..13840967
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AA seq
1302 aa
AA seq
DB search
MSLLRLCAFPKYLSGRFMFERSARFTLNSNHCQNCLRLRNNSERGTRANPWTTLHQRHYS
AIPKREDGKRRVWEQSHLLDVLEARMQQLQSDVLHVKHLKVEFVKVPKGEKRDAPVKSQK
TDAETSKAVQSTKKGTSSDNPPSKAHASRWIEKLKLEKSNKTKKQSSLQQKLRDKTGAAP
KSSKGNLMAPGTSMKTISIAKRCKQPEPESTTAPTPQSKHLQPKVSKHCKSATTMKADPE
KLSRTAELAEVEELEEMIGEWSPTNAEKLLEDKDGNRYGDAQLNLRCHLEVCVFTGDVER
AQRSLFFHHRHLSKRKALSISAYNIMMRLWAKKGSVNHIGRLFTMVEEAGLKPNLASYSA
ALECMGRNPDTSSRTINRCLQQMAESGLHLDDMFRQCVFRQDERDMVLKAIRTVQFDYEP
HTPSEQPRCSLPLVENFYTEREETSYPKLDFSVAELQERFRRQLAMEQANTITIDSVEAI
KPVTEHMARMRKLLAEQRSQWQKALLKALRESRMVLGSSNQRNGKINIYPFLRILRDEDY
VNIMLQGLANLPPSGESLLFLAKELGNRVHNVYCIQQKSHSQIVAKLGNIYNSYVKLLGK
DTEPSIVLPREQWSTLEAEHTAGPSLLSDDTPWPHMLVIQLGSFLVDLLVRELKIPNNIL
NPAQENKLIPVLYHMYTFRSNRQIGFIKPHPILTQIQSEAMETKLTFDSYVMPMLCPPVP
WTSAKSGAYLLTPTKLMRSVEGAIQHQLLLEKCQDEELHAVLDSLSQLGNCAWRINKPLL
DIIISIFNDKGSEKLDVPPPISEAPEIPRFNPHDPAYTPAEKAHLKREATRAKKKVAEMH
SLRMDALYKLSIANHMRDEIFWFPHNMDFRGRTYPCPPYFNHLGSDVTRAILLFAEGKPL
GPKGLDWLKIHLVNLTGLKKRSSLAGRLEYANTIMDDILDSADNPSTGRKWWMNADEPWQ
TLACCMEIANASRSCDPTQFISHFPIHQDGSCNGLQHYAALGRDVIGATSVNLLPCEEPQ
DVYGGVAQQVEEFRARDAAKGMKIAQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIEKR
LKEIDDFPKEYIWDASHYLVHQVFSSLKEMFTGTREIQDWLTESARLIAKSGSTVEWVTP
LGLPIVQPYHRTRNHVLKSNIQFLSLQISHDVYERPDTVKQKNAFPPNFIHSLDSTHMML
TALNCYSAGLTFVSVHDCYWTHALTVDIMNKVCREQFVALHNQPILQDLSKFLLQKYCSA
PPGNTKTKKFLEYWKMSQLLGKVPETGDFDLQRVKESTYFFS
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttttaagactgtgtgcttttccgaaatacttgagcggtagattcatgtttgaa
agaagtgctcgatttacattaaatagcaaccactgtcaaaactgcctcagactccggaat
aacagcgagagaggaacgagagctaacccatggacaacactacaccaaaggcactactcc
gctattccaaagagggaagatgggaaaagacgagtgtgggaacagtctcatttgttggac
gttctcgaggctcggatgcagcagttgcagtctgacgttttacatgtaaaacatttgaag
gttgaatttgtcaaagtgccaaagggagaaaaaagagacgctccagtgaagagtcaaaag
acagatgcagaaactagtaaagctgttcagtccactaaaaaaggtaccagttcagataac
ccgccctccaaagcacacgcgagccgctggattgagaaactcaagcttgagaagtcaaac
aaaactaaaaagcagtcatctctgcagcagaaactccgcgacaaaacaggagcagcacca
aaaagcagtaaaggaaatctgatggctcctggaacgtccatgaaaacaatctctattgcc
aaaaggtgcaaacaacctgaacctgagtccacaacggctccaacacctcagtccaaacac
ttacaaccaaaggtgtctaaacactgtaaaagtgcaaccacaatgaaagcggatcctgaa
aaactttccagaactgcagagctggctgaagtcgaagagctcgaagaaatgattggtgag
tggagtccgaccaacgccgagaaactcctagaagataaagatgggaaccgttatggtgat
gcgcagctaaacttgcgctgccacctggaggtgtgtgtttttacgggggatgtggagcga
gcacagcgctccctgttctttcaccaccggcacctaagcaaacgcaaagcgctctccatc
agcgcttacaacatcatgatgaggttgtgggccaagaaaggatctgtgaatcacattggt
cgcttattcactatggtggaagaggcaggcctgaagcccaacttggcgtcatactctgct
gcgctggagtgcatgggccgcaatcccgacacctcttcacgcaccattaacagatgtctg
cagcagatggctgaaagtggcctgcatttggacgacatgttcagacagtgtgtattcaga
caggatgagcgagacatggtgctgaaggccatccggaccgtacaattcgactacgagcca
cacaccccttctgaacagccacgctgctcattaccactggtggagaacttctatactgag
agggaagaaaccagctatcctaagctagactttagcgttgctgagctgcaggagcgcttc
aggcgtcagctggctatggaacaggccaacaccatcaccatcgactctgtggaggccatt
aaacctgtcacggaacacatggccaggatgaggaagctgttagctgagcagcgctctcaa
tggcagaaagctctgctaaaggctctgcgagagagccggatggttttaggcagcagcaac
cagaggaacgggaagatcaacatctacccgtttctgcgcatcctccgtgatgaggattat
gtcaacatcatgctgcagggattggccaacctgccacccagcggagagtctctgctattc
ctggctaaggaactgggcaacagagtccacaatgtgtactgcatacaacagaagagtcac
agccagatagtggcgaaactgggcaacatctacaactcgtacgtcaaactgctcggaaaa
gacacagagcccagcattgtgttgccacgggaacagtggagcactttggaggcagagcat
accgctggcccctccctcctgagtgatgacacgccctggccacacatgctggtcattcag
ctgggcagcttcctggtggatctgctggtgcgtgagctcaaaattccgaacaacatcttg
aaccctgcccaggagaacaagctcatccctgtgctctatcacatgtacacgttccgcagc
aatcgacagattggttttatcaagccgcacccaatcctgacccaaatacagtcagaagcc
atggagaccaagctgacctttgactcgtatgtgatgcccatgctgtgcccaccagtgccc
tggacatcagccaaaagtggggcttacttgctgacgcccaccaagctgatgcgttcagtg
gagggtgccatccagcaccaactgctgctggagaagtgccaggatgaggagctgcatgct
gtgctggactccctcagccagctgggcaactgtgcatggaggatcaacaaacctctgttg
gacatcatcatctccatctttaacgataagggcagtgagaagctggacgtgcctccaccc
atttctgaggcgccggaaatcccacgcttcaaccctcatgacccggcatacacgcctgcc
gagaaggcccacctgaagcgcgaggccacaagggccaagaaaaaggtggctgagatgcac
agtctgcgcatggatgcgctctacaagctgtccattgccaaccacatgagggatgagatc
ttctggttccctcacaacatggatttccgagggcgtacttacccgtgcccaccctacttt
aaccatctgggaagtgatgtaaccagagccatcttgctgtttgctgaggggaagccgttg
ggtcctaaaggcctagactggttaaagatccacctggtgaacctcacgggtctgaagaag
cggagttcgctggctgggagactggaatacgccaacaccatcatggatgacatcctggac
tctgcagacaacccgtcaacggggaggaagtggtggatgaatgctgatgagccttggcag
actctggcatgctgcatggaaatagcaaatgcctccagatcatgtgaccccacacagttc
atctcccattttcctatacatcaggatggctcctgtaatggcctccagcactatgctgca
ctgggtcgtgatgtgattggtgcaacatcggtaaacttactaccctgtgaagaaccgcag
gatgtgtacggtggtgtggctcagcaggtggaggagttccgggcccgagacgctgcaaag
ggcatgaagattgcacaggtgctggagggcttcatcagcaggaaggtggtgaagcaaacg
gtgatgacggtggtctatggggtcacgcgctatggtggccgactgcagattgaaaagcgc
ctcaaggagatcgatgacttccccaaggagtatatttgggatgcttcacactacctagtg
catcaggtcttcagcagcttgaaggaaatgttcaccgggacaagagagatccaggactgg
ctgactgaaagtgctaggctaatcgcgaagtccggcagcacggtggagtgggtgacccct
cttggactgcccatcgtccagccctaccaccgcaccaggaaccacgtgctcaagagcaac
attcagtttctgagtctccagataagccatgatgtctatgagaggccggacacagtaaag
caaaagaatgcatttcccccaaactttatccactctctggactccacacatatgatgctg
actgcactcaactgttacagtgctggtttgacgttcgtatcggtgcatgactgctactgg
acccacgctcttacagtcgacatcatgaacaaggtgtgtcgtgagcagtttgtggctcta
cacaatcagcccattcttcaggacctctccaagttcctgctgcaaaaatactgctcagca
ccaccaggcaacaccaagaccaagaagtttctggaatactggaagatgtcacagctgctg
gggaaggttccagaaacaggtgattttgatctgcagagggtgaaagaatccacatatttc
ttcagttga
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