Ictalurus furcatus (blue catfish): 128613659
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Entry
128613659 CDS
T09387
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128613659 (sox2)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128613659 (sox2)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128613659
NCBI-ProteinID:
XP_053490640
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All DBs
Position
10:18789960..18792852
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AA seq
332 aa
AA seq
DB search
MYNMMETELKPNPGGNNTGTGNTGGGTPGQKNSPERVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDK
YALPGGLLAPGGGGGGNLGGNGMSAGVGSGLGGLGVNLGVNQRMDAYAHMNGCWSNGGYG
MMQEQLGYAAAASPMQQQQQQHHVHRYDMSALQPYGSMTSAQTYMNGSPTYSMSSYPQLS
SMGSAVKSEASSSPPAVTSASHVRAAAAPAPAHAPPPPSCQTGDLRDMISMYLPGAEVAE
QTGQSRLHLSQHYQSAPVHATTINGTIPLSHM
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagaccgagttgaaacccaatcccgggggtaataacaccggcacc
gggaacaccggaggcggcacaccagggcagaagaacagtccggagcgcgtaaagaggccc
atgaacgcgttcatggtgtggtcccgcggtcaacggcggaaaatggcgcaagagaacccg
aagatgcacaactcggagatcagtaagaggctgggcgctgagtggaagctgctgtccgag
tctgagaagcggccgttcatcgacgaggccaagcggctgcgcgcactgcacatgaaggag
cacccggactacaagtaccgaccgcggcggaagaccaagactctcatgaagaaggacaag
tacgcgctgcccggcgggctcctggcaccgggcggcggtggcggcggaaacctaggtggt
aacggcatgagcgccggcgtgggctcgggcctcggcggcctcggcgtcaacctcggggtc
aatcagaggatggacgcgtacgcgcacatgaacggctgctggagcaacggaggctacggc
atgatgcaggagcaactgggctacgcggcggcggcgagtcccatgcagcagcagcagcag
cagcaccacgtccaccgctatgacatgagcgcgctgcagccgtacggctccatgacgagc
gcgcagacctacatgaatggctcacccacatacagcatgtcgtcttacccgcagctcagc
tccatgggctcggctgtgaaatccgaggccagctcgagtccacccgccgtcacgtccgcg
tcgcacgtcagagccgccgcagcacccgcacctgcacacgcaccgccgccgccctcgtgc
caaaccggggacctgcgggacatgatcagcatgtatctgcccggggcggaagtggccgag
cagacgggccagagcagactgcacctgtcgcagcactaccagagtgcacctgtgcacgca
actacgattaacggcaccatcccgttatcgcacatgtaa
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