Ictalurus furcatus (blue catfish): 128613754
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Entry
128613754 CDS
T09387
Symbol
top1mt
Name
(RefSeq) DNA topoisomerase I, mitochondrial isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ifu03032
]
128613754 (top1mt)
Enzymes [BR:
ifu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
128613754 (top1mt)
DNA replication proteins [BR:
ifu03032
]
Eukaryotic type
DNA Topoisomerases
128613754 (top1mt)
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Gene cluster
GFIT
Motif
Pfam:
Topoisom_I_N
Topoisom_I
Topo_C_assoc
FapA
Motif
Other DBs
NCBI-GeneID:
128613754
NCBI-ProteinID:
XP_053490803
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Position
1:complement(26780275..26797797)
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AA seq
601 aa
AA seq
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MKTCYGALTLLIRFSVKFDRTAFACHSVRKYARTAARVRVPRWEEGKHADGQKWKSLEHK
GPLFPPEYEPLPSNVPFLYDGKPVQLSLAAEEVATFYAKMLDHEYTTKENFQNNFFTDWR
EVMTEDERKLIKKLSKCDFSKIHKYFVEKSEEKKNMTKEEKQVLKEEANKLTEEYGFCLL
DGHKEKIGNFRLEPPGLFRGRGEHPKMGKLKKRVQPEDVIINCSQDAKVPEPPAGHHWKR
VQHENTVTWLASWVENIHGHIKYIMLNPSSKLKGEKDWQKYETARKLKLRVDAIRREYRK
AWTAREMKQRQRGVALYFIDKLALRAGNEKDDDTADTVGCCSLRVEHITLHKHQDGQDYV
VEFDFLGKDSIRYYNKVPVEKQVFKNLKLFMENKDPEDDLFDRISTIYLNKKLNEAMPGL
TAKVFRTFNASTTLQEQLDKLTIDDMTVEEKLLAYNRANRAVAILCNHQRAAPKTFEKSM
LALQEKIKKKTEEVEKAKKELKQAKKDHKEQPSEKSKKLVEKKEKALKRLSEQLKKLKLQ
ETDREENKVIALGTSKLNYLDPRITVAWCKKHNVPVEKIYNKTHRAKFAWAIDMADENFQ
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgtgttatggtgctttgactctgctgattcgcttttccgtgaagtttgataga
actgcgtttgcgtgtcactccgtcagaaaatatgctcgtaccgctgcaagggtgcgcgtg
ccaaggtgggaggaagggaagcacgccgatggtcagaagtggaaaagtcttgagcataaa
gggcctctcttcccaccagaatatgaacctttaccaagcaatgtgccatttttatatgat
ggaaagcctgtgcaacttagcctggctgctgaagaagtagcaactttctatgccaagatg
ctggatcatgagtacaccaccaaggagaattttcaaaataatttcttcactgactggagg
gaggtaatgacagaagatgagaggaaattaatcaagaagctgtccaagtgtgacttcagc
aaaatccataaatactttgtggaaaagtcagaagaaaagaagaacatgaccaaagaagaa
aaacaggttttaaaggaggaagctaataaactaaccgaggagtatggattctgtctgctg
gatggacataaggagaaaataggcaattttcgtctggagcctccagggctgtttagagga
cgaggggaacaccccaaaatgggcaagctgaagaaacgcgtccagcctgaggatgtaatt
attaactgcagtcaagatgcgaaggtcccagagccacctgcaggccatcactggaagaga
gtgcagcatgaaaacacggtcacgtggctggcatcatgggtggagaacatccatggacac
attaagtacatcatgctcaatcccagctccaaactcaagggtgagaaggactggcagaag
tatgaaactgcacgtaagctgaaactgagagtggatgctatcagacgtgagtaccgaaag
gcctggactgctcgagagatgaaacaaagacaacgaggagtcgctttatacttcatcgac
aagctagctctgagggctggtaatgagaaggatgatgataccgcagacacggtgggctgc
tgttctctgcgtgtagagcacattactctccacaagcaccaggatggtcaggactacgta
gtggagtttgacttcctgggcaaggactccatccggtactacaacaaagtgcctgtggaa
aaacaagttttcaaaaacttgaaacttttcatggaaaacaaggatccagaagatgaccta
ttcgacagaatttctacaatctatctcaataagaagctgaatgaggcaatgcctggactg
accgccaaagtgtttcgaactttcaatgcttccaccactctgcaggagcagctggacaaa
ctcaccatcgatgatatgactgtggaggaaaaactgctggcgtataaccgagccaacaga
gctgtggctatactctgcaaccaccagagggcggcacccaaaacatttgagaagtccatg
ttggctcttcaggagaagatcaagaagaaaacggaggaagtggagaaagccaaaaaggag
ctgaagcaagcaaagaaagatcacaaggagcaaccatcagagaagtcaaagaagctggtg
gagaagaaggagaaagctttgaagaggctgtcagaacagttaaagaagctgaagctgcag
gaaacggaccgagaggagaacaaggtcatcgctctgggcacttccaagctcaactacctc
gacccccgcatcactgtggcctggtgtaagaagcacaacgttcctgtggagaagatctac
aacaagactcacagggcgaagtttgcctgggctattgacatggctgatgaaaacttccag
ttctaa
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