Ictalurus furcatus (blue catfish): 128613774
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Entry
128613774 CDS
T09387
Symbol
si:ch73-63e15.2
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128613774 (si:ch73-63e15.2)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128613774 (si:ch73-63e15.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
128613774
NCBI-ProteinID:
XP_053490839
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All DBs
Position
10:14527434..14596156
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AA seq
1410 aa
AA seq
DB search
MPFFSASSAMEGQNCSHTEGTQMDTGMLGLASSAMESPLWTPWSFSPTPFNLHWPTQSGS
QQHYSSSTPGMHMDISSHSTFPDLDISYSEDFFQDLVCIDDLSNLSNDSLSEYVDDSLST
VPTIWDISTPAQNQELNSRRFQGLNSLEDITAIISTPHLGSIQSSQSQPEEEEDIEEEET
EELGHVDTYADYKPSKSTIGNSHPDRVVETNTLSSVPPPDISYTLSIPEAIIDSNVLSAL
QLEAIIYACQQHEVILQNKQRAGFLIGDGAGVGKGRTVAGIILENYLKGRRKALWFSVSN
DLKYDAERDLQDIGAPNILVHALNKIKYGDTATSEGVLFATYSALIGESQAGGQHRTRLK
QILDWCGPDFDGVIVFDECHKAKNATSTKMGKAVIQLQNKLPLARVVYASATGASEPKNM
IYMSRLGIWGEGTQFKTFDDFLHAIEKRGVGAMEIVAMDMKVSGMYIARQLSFSGVSFRI
EEISLDDDFTLVYNKAAKLWAEALAVFTQAADFLGMVSRKSLWGQFWSSHQRFFKYLCIA
SKVRCLVELAKKELEAGKCVVIGLQSTGEARTREVLDENEGHLDKFVSAAEGVFQSLVQK
HFPSEKQRREKGAASKRKRKPKGRQSKCPRQGADAKSVINISDDSSTESDGVDSDSNSSP
DSLQDNGDDVIFITQTNCHAARLEEMKQSLLIKIAELGKELPLNTLDELIDKFGGPEKVS
EMTGRKGRVVRRLDGSVHYESRAEHGHTIEHINIKEKDRFMNGEKLVAIISEAASSGISL
QADRRVKNQCRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYIFLISELAGERRFASI
VAKRLESLGALTHGDRRATESRDLSKYNFENKYGNRALEKITKAILGHIESKVAPPKGYP
GGDAMFFRDMKQGMMDVGIFCKEARLGINPEKDCTITKFLNRILGLEVHKQNSLFQYFSD
NFEYLIEKDKKEGKYDMGILDLAPGNDEISNETQEKFLTPGNPQEGQVILYKITVDRGMP
WEEALKKAHTLSNPDEGFYISHKLRGSHPCVLLAEQGRGHNLTVYKPNVGKQKQPENLEK
IQKKYHKVTPGDAKESWENQFTFSLRKCSHANWNGRCKKVDEGQECLQGMRLRQYHVLCG
ALLCVWKRVADVVADITSSSILQIVRLKTREHKQVGIKIPENCVAQVRDELDRMDKDVKK
RRQEKELKAQNQWLDEQRMLEERRRDISFTPYHSSLFSYPDGVLDLTMPGLSHLSTHSTG
TDVLSGPVTDFSMVFPPEHQQQQSQPESAHQELLNFLNSLPEQPQCHPALPSSSSDSLHA
AIPAPTSLFPTSTIHPSSSSSSLFSPSLTSSSSSSSLPLFSSLSPSDQHPFANCSDDTAI
DAKEVLSSMLRSGSDQSVIHFRIPESEHLS
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgccttttttctctgcttcatctgccatggaagggcagaactgttcccataccgaggga
acgcagatggatactggaatgttgggcctggcttcttctgctatggagagtcccctttgg
acaccgtggagtttctcaccaacgcctttcaacttgcattggcctacacagtctgggagt
cagcaacactattccagcagcactcccgggatgcacatggacatttccagccattctacc
tttcctgatctggatatttcctacagtgaagacttctttcaggaccttgtatgtatagat
gatctgtccaatctgtctaacgactccctgtctgagtatgtagatgacagcttgtcaact
gtacctaccatatgggacataagtacaccagcacagaatcaggagctgaattccagacga
tttcagggtttaaacagtttagaagatatcactgctataatcagcacaccacatctgggg
agcattcagagttcgcagtcacagccagaggaggaggaggacatagaagaagaggagaca
gaagagctaggccatgtagacacctacgctgactacaaaccttcaaaatccactatagga
aactcgcatcctgaccgtgtagtggagaccaacactctttccagcgtccctccacctgac
atcagctacactctctccattcctgaggccatcatagacagcaatgtgctctcggccctg
cagctcgaggccatcatctatgcctgccaacaacatgaggtgatcctacagaacaagcag
agggcaggttttctgataggagatggggctggagtgggaaagggccgcacggtggccggg
atcatccttgagaactatctaaagggaaggaggaaagcactttggttcagcgtatccaat
gacctcaaatatgatgctgaacgagatcttcaggacattggtgctcctaatattctagta
catgccttgaataagataaagtatggagacacagctacctcagaaggtgttctgtttgct
acctactcggctctgattggagagagccaggcaggaggccaacatcgcactagactcaag
cagatcctggattggtgtggacctgattttgatggtgtcatcgtgtttgatgaatgccat
aaagccaaaaatgccacatccaccaaaatgggcaaagctgtgatacagctacagaacaag
cttcctctggccagggtggtgtacgccagtgccacaggtgcctccgagccaaagaacatg
atctacatgagtcgtctgggcatctggggagaaggaacacaatttaagacatttgatgac
ttcctacatgctatagaaaagagaggtgtgggtgccatggagattgttgccatggacatg
aaggttagtgggatgtacattgcacggcaactgagcttctcgggagtgtccttccgcatc
gaagaaatcagcttggacgatgacttcacactcgtctacaacaaagccgccaaactgtgg
gcagaagccttggccgtgttcacccaggcagctgatttcctcggtatggtgtccaggaag
tctctgtggggtcaattctggtcttcccaccagcgctttttcaaatacctctgcattgcc
tccaaggttcgctgtctggtcgagctggccaagaaggaattggaagctggcaagtgcgtt
gtgattgggctgcagtccacgggcgaagcgcgaacccgagaagttcttgatgaaaacgaa
ggacacctcgacaaatttgtttctgctgcggagggtgtgttccagtccttggtccaaaag
cacttcccttcagagaaacagcgaagagagaaaggagcagccagcaagaggaaacgtaag
cccaaaggacggcagtcgaagtgccccaggcagggtgcagatgccaaaagcgtcattaac
atcagcgatgatagcagcacagagtctgatggagtggacagcgactcaaattcatcacca
gattcactacaggacaatggcgatgatgtcattttcattacacaaaccaactgtcatgct
gctcgtttggaggagatgaagcaaagtctccttattaaaatcgctgaacttgggaaagaa
ctacctctgaacacattggatgagctcatagataaatttggaggtccggagaaggtttca
gagatgacaggacggaagggcagagtggttcggcggctagatgggagtgtgcactatgag
tctcgagctgagcatggccacaccattgagcacatcaacatcaaagaaaaggatcgcttc
atgaatggagagaagctggtggctataatctctgaggcggccagttcaggaatctctttg
caggcagacaggcgggtaaagaaccagtgcaggcgagtgcacatgaccctggagttgccc
tggagtgctgaccgggccatccagcagtttggtcgcactcaccgctccaaccaagtcaca
gcaccagagtatatcttccttatctctgaactggccggcgaaagacgcttcgcttctatt
gtggctaagaggctggagagcctgggagctctgacgcacggtgaccgaagagcaacagag
tctagagatttgagcaagtacaactttgaaaataaatatggtaacagggctttagagaag
atcaccaaagccattctgggtcacattgagagtaaagtggcccctcccaagggctatcca
ggtggtgatgccatgttcttcagagacatgaagcaaggcatgatggatgttggcattttc
tgcaaggaggctcgccttggcatcaaccctgagaaagactgcaccattactaagttcctc
aatcgtattttgggtctggaggtgcacaagcagaactctctctttcagtacttcagtgac
aattttgagtacctgattgaaaaggacaagaaggaaggcaaatatgatatggggattttg
gatctggctcctggtaatgatgaaatctccaacgagactcaagagaagtttctgactcca
ggcaacccacaggaaggccaagtcattctctataagatcactgtggacagaggtatgccc
tgggaagaggctctcaaaaaggctcacacactcagcaacccagacgaaggcttctacatc
tcccacaagctgagagggagtcacccatgtgtgctgctggccgagcagggcagaggccac
aacctgactgtctacaaacccaatgtgggcaaacaaaagcaaccggagaatctggagaaa
atccaaaagaagtaccacaaggtgactccaggggatgcgaaggaaagctgggagaatcag
ttcacgttctccttaaggaaatgtagccatgccaactggaacgggaggtgcaaaaaggtc
gatgagggccaggagtgtttgcagggtatgcgcttgcggcagtaccatgtcctttgcggt
gctcttctgtgtgtgtggaagcgtgtagctgacgtggtggcagacattaccagctccagc
atcctgcaaatcgtacgcctcaaaaccagggagcacaaacaagtgggtataaagatccca
gagaactgtgtggctcaagtgcgagatgagctggaccgtatggataaggatgtgaaaaag
aggcgccaggagaaagagctgaaggctcagaaccagtggctggatgaacagaggatgtta
gaagaacgtcggagggatatttctttcaccccttaccatagctccttattcagttaccct
gatggtgtcctggacctgacaatgcccggcctttctcacctttccacacacagcacggga
acagacgtcctctctgggcctgtcaccgatttcagcatggttttcccaccggagcaccag
cagcaacaaagtcaaccagaatctgcgcatcaggaattgttaaactttctcaactcgctg
ccagaacaaccacagtgccaccctgcgcttccctcttcttcatcggactctttacacgct
gccatacctgccccaacgagcctcttccccacctccaccatccatccttcctcctcctca
tcatcccttttctctccttcactcacttcatcgtcttcttcttcttcactgccactcttt
tcctccctgtcgccgtcggaccagcacccatttgctaactgcagcgacgacaccgccatc
gatgccaaagaggtgctgagcagtatgctgaggagcggctcagaccagtctgtcattcac
ttcagaatacccgagtcagagcatctgtcctaa
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