Ictalurus furcatus (blue catfish): 128613800
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Entry
128613800 CDS
T09387
Symbol
frem1b
Name
(RefSeq) FRAS1-related extracellular matrix protein 1b
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128613800 (frem1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ifu04091
]
128613800 (frem1b)
Lectins [BR:
ifu04091
]
C-Type lectins
Lecticans
128613800 (frem1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
128613800
NCBI-ProteinID:
XP_053490881
LinkDB
All DBs
Position
10:complement(15001567..15037148)
Genome browser
AA seq
2154 aa
AA seq
DB search
MGVVILVWTMVALSHILPLTQAESLLRLNSGLRVIRGQSVPVTTEELQFNTDGSSEACKV
EVVLNEPVTQRVGKLTPQVFDCHFHPDEVKYVHNGSPLLEEDIVMMRVYRFTHSETFTET
FLLKVQVLGAQRSLIEFGKVPLVVSEFYGLSNTIDSSVLTFRSEPDVICTVRLLTSEINS
PMLGQIVKEDLAQRDQASELIPGPRRGRQTTISCPGNKPCVHNSREVRFLKTSCSEFLTS
GLKYQHLSPPSPEIDYVPLRVEIRDQNTRALLKAESVWLPVLIHGAMQNQPPHAAFMSMF
ILEVDQFILTPITTAALDAKDNETPQAQLVFNVTKPPAEGYITHLDDHTKSIFSFSWQDL
NEMKIAYQPPNSSHTSRKNIEVDFQAIDGFFTTSPTIMVHISIRTAETNAPRVSWNLGLD
LLEGQSRPITWENLQIVDNDNIDTVTLVAVDGPLHGRLSVRGGKGFMFKVKDLREGVVVY
HHSDSDTTRDYIVFRITDGRHSIRHKFPINILPKDDTPPFLINNVAFEVQEGSLVLVEEY
MLMASDLDSSDDYIHYQLVTFPSAGNIVRKSSVHEPGVPVKTFMQRDILQGLIYYRHTGE
EMFEDSFDFILSDIHEPPNLSDRHTVVVHVFPVKDQLPVEVSGTVRSITLKETELVYITQ
SHLHFQAPEHPDTDLMYFITQSCFSPSKPQLPDAGRLFYTETTKSMEKDAMIPVLKSFTQ
HAVTHHKIAYMPPVEDIGPEPLFVQFVFSVNDQQGGVLTGLIFNITVTPVDNQVPEMFTN
LLKVEEGGSSFLMEEHLLVRDADSPKEKLRVQVRTQPRHGRLELQGVVLLEGESFHLQDL
KALRVRYIHDDSETTRDSIGLTITDGINSAQSELLVQILPLNDEPPQLGLGLRDGLSCKE
GSRVQITAEYLFATDADSDDTRLTYMLARTPARGVLQRNGVIVDKFSQLDVLNGLIFYLH
TGGEIGPDPILDTVTLIVSDGEAGTVGCCQEDAVPPPVPLHGTLPVYDLNVTVIPVNNQA
PSIIIGDMLVVDEGSSVCLCGDLLTATDSDTKPDQLNFFLEIPPHYGFLENILPSPGFEK
SNAGIQVVSFSQLHLSSGFINYIQSIYQGVEPTADHFNVSVTDGVHKSEAVPFYIVINPM
NDETPSLFLNNFTVMEGGIKELNPAILDAVDLDAPPDLLSFTILVPPNHGTLLNRIYGLD
MSRYKDMGPEILQRSLPVHSFTVQALRQGVKIMYMHDDTETREDTFTIQLTDGRHAVQGT
AWVHILPVNDEKPQLIKNAGLEVEALERRVISSVVLEAEDRDTPSNQIYYVLNASPRFGF
LQLKTEAGFTDLNAGQNFTQDDVEMNCLFYKHTTFSGFKGHDRFHFFLSDRDNETPPQSF
FIAIQTVQKGDIALITKPMTISEGERVILTTDILMATDSGSQSFELVYTVTVPPKHGHLH
MVQHPGIPLLTFTQMDVASHRVCYTHDNSHFTDHDSFSFDISNGVTSIRSSLTFTVEHHD
RIPPTLSINTGLQLTESTTRTISPEHLQLTDPDTALENLTYTVIQPPQYGKLLLKGFPMP
WTRFTQLDINNMLLSYQHLNSFAKIDRFTFQPSDGTNKGYLEYGQLKEQAAVFTIQIEVL
DKSPPHIVTKGTPSTVEYLQNNQHGIYITSKDLQASDPDSPYQELEFIITRPPHFGYLEN
AITGGYIKGRFTQKDVDQKAVRYIIPSDMEVTADSFEFQLTDRAGNIMLPEVMELRWSRV
ELTASCYRVCENAGTLAVQVIRSGNSIDPAYVGIKVEDGTAKVGKDFTHSSASLIQFDPG
VSVKFWNIYLKDDGLEENHERLEVVLKAQKNAVLGARIRASVEIVDPRHGRCDPDALIID
YDEKKSPVLQPPRIHKPPPPPTLGAAEEDYTPDPNTGIVWENYQPRGDVPYRTQFIRFSG
GEAADQPFLSQGRRQLRLLGNNRSGVRQETSHTKWLHRLTPIRPELEIPVPRVHPELEIS
PIWNWPGYTAASRSAETPQRDTFLTGFTSAVHQHKSAKAISVGCLHGWTHYRQRCYILGP
GVASWRNAQNACTVLDSHLTSVRSKNHMKWLWRFAGKQPFWIGLSGSPDRWFWADSTPLK
FSRLKKNKASDNHAPNGSSHSCVLARDQKTWTRENCTTIAEHKYICSAGAEVNK
NT seq
6465 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggtgatccttgtatggacaatggttgccttaagccatatcctgccgctaacc
caggcagaaagcttgttgaggttgaactctggactgcgggtgatccgaggccagagtgtt
cctgtgaccacagaagagctgcagttcaacaccgatgggtcctcagaggcctgcaaagtg
gaggtggtgctcaatgagcctgtgactcagagggtgggaaaacttactccacaggtattt
gactgccacttccaccctgatgaggtgaaatatgtccataatgggagtccattattggag
gaggacatagtcatgatgagagtctatagattcacacattcagagacatttactgagacg
ttcctcctgaaggttcaggtccttggggctcagaggagtttgatagagtttgggaaagtt
cctctggtggtttcagagttttacggcctctctaacaccattgacagcagtgtgttgacc
ttcagatcggagcctgatgtcatctgtaccgtccgtctcctcacctctgagatcaacagc
cctatgttgggtcagatcgttaaagaggatctggcacagagagatcaggcatctgagctg
atccctgggcccaggagaggtcgacaaacaactatttcttgccctggaaacaagccctgt
gtccataacagcagagaggtacgcttcctgaaaaccagttgcagtgagttcctcacttca
ggtttgaagtaccaacatctcagccctccttcacctgaaattgactatgtgccactccga
gtggaaatcagagatcaaaacacacgagccctcttaaaggcggaaagtgtttggctccca
gtcctgatacatggagccatgcagaaccagcctccccatgctgctttcatgtccatgttc
atcctagaagtagatcagttcatcctgaccccaatcaccacagctgctctggatgccaaa
gacaatgagacgcctcaggctcagctggtgtttaacgtgaccaagcctccagcagagggc
tatatcacacatctggacgatcacaccaagtctatattctccttctcttggcaagacctg
aatgagatgaagattgcgtatcagcccccaaacagcagccacaccagcagaaagaacatt
gaggttgatttccaggctattgatggcttcttcacaactagtcctactattatggtgcac
atctcaatccgcacagcagaaacaaatgctcctcgagtctcctggaatctggggctggat
ctactggagggtcagtccagaccaatcacatgggagaacctgcagattgttgataatgac
aacatagacactgtcactctggtagctgtggatggtcctctacatggacgactcagtgtt
cgaggtggaaagggcttcatgttcaaagtgaaggacctccgcgagggcgtggtggtttat
catcattctgatagcgacaccacaagggactacatcgtcttcagaatcacagatggacgc
cacagcattcgacacaagttccccatcaacatcctccccaaggatgacactcctcctttt
cttatcaacaacgtagcatttgaggtgcaggaggggagtttggtgctggtggaagagtat
atgcttatggcatcagatctggattccagcgatgactatattcactaccagcttgttact
ttccccagtgcaggaaacatagtcaggaaaagctctgtacatgaaccaggtgttccagtg
aagacatttatgcagagggacatattacagggccttatctactacagacacacgggagag
gagatgtttgaagactcgttcgacttcatcctctctgacatccatgaaccaccaaatcta
tctgacagacatacagtggtggtccacgtgttccctgtgaaggaccagctgccagtggaa
gtctccggcacagtccgttccatcacacttaaagagacagagcttgtttacatcacacag
agccaccttcacttccaagcccctgagcacccagacactgacctgatgtacttcatcacg
caatcctgtttcagcccttccaaacctcagctaccagatgcaggtagactcttctacaca
gaaactacaaaatctatggaaaaagatgccatgattccagtgcttaagtcattcactcag
catgcagtgacccaccacaaaatagcctacatgccccctgtagaggatatcggtcctgag
ccactcttcgtgcagtttgtcttctctgtaaatgaccaacagggcggcgtgctcactgga
cttatctttaacatcacagtcacacctgtagacaatcaggttccagagatgttcactaac
ctgctgaaggtggaggagggtggaagtagttttctgatggaggagcacctattggtgcgt
gatgccgacagtccaaaggagaaactcagggtgcaggtgcgaacacaaccccggcatggc
agactggagctgcagggagtggtactattagaaggggaaagcttccacctgcaggaccta
aaagcactgagagtcagatatatccatgacgactctgagactacaagggacagcataggc
cttacaattacagatggaataaactctgctcagagtgaacttctggtgcagatcctccct
ttgaatgatgagcccccacagctgggcttaggcctgagagatgggctctcctgcaaggaa
ggcagtcgtgtgcagattactgctgagtatttatttgctacagatgcagacagtgatgat
actcgactcacctacatgctggctcggactccagcccgtggggtgctgcagagaaatgga
gtcatcgtggacaagttctctcagcttgatgtgctcaatggcctcatcttctacctgcac
acaggaggtgaaattggtccagaccccatattggacactgttactcttatagtgtctgat
ggggaggccgggacagtcggttgctgccaagaagacgcagtccctccgcctgtcccttta
catgggacacttcctgtctatgaccttaatgttactgtgattcctgtcaacaaccaggca
ccatccataattataggagacatgttggtggtggatgagggatctagtgtatgtctctgt
ggtgatctgctgacagccacagactctgacactaaaccagaccagttaaacttcttcctg
gagatcccacctcattatggctttctggagaacatccttccctccccaggctttgagaag
agcaatgctggaatccaagtggtttctttcagtcagctccatctcagctctgggttcatc
aactacatccagtcgatttaccagggtgtggagcccacagcagaccacttcaatgttagt
gtcactgatggagtccataagtcggaagctgtacctttctacattgttatcaaccccatg
aatgacgagactccatctctgtttctgaacaacttcacagtcatggagggaggaataaaa
gagcttaaccctgccattctagatgcagtagatcttgatgctccaccagatcttctgagc
ttcaccatccttgttcctcctaatcacgggactctgctgaataggatctatggacttgac
atgagccgatataaagatatgggcccagagattttgcaaaggagtctaccggtgcactcc
tttaccgtacaagcactgcgacaaggggtgaagatcatgtatatgcacgatgacacagaa
acccgtgaggacactttcaccatacagctgacagatggcaggcatgctgtccaggggacg
gcatgggtccacatcctaccagtcaatgatgaaaagccccagctgataaagaatgcaggt
ttagaagtggaggcactggagaggagggttatatccagtgtggtgctggaggcagaagac
cgtgacacccccagtaaccagatctactacgttcttaatgcgagccccagatttggcttt
ctgcaactcaagacagaagctggattcactgacctgaacgcaggtcaaaactttacacag
gacgatgtggagatgaactgcctgttttacaaacacactacattcagtgggttcaaaggt
catgaccgcttccactttttcctcagtgacagagacaatgagacacctccacagagtttc
ttcatcgctatccaaactgttcaaaaaggtgacattgctctgatcactaagcccatgact
atttcggagggggaaagggttatactgaccacagacattctgatggctacagacagtgga
agccaatcatttgagctggtctacaccgtgaccgtccctcctaaacatggacacctgcac
atggtccagcacccaggaatccctctgctcactttcactcagatggatgtggcttcacac
cgggtgtgctacactcatgacaacagtcattttactgaccacgactccttcagctttgac
atcagcaatggcgtgacctccattaggagtagccttactttcacagtggagcaccatgac
cgtatcccacctaccctgagcatcaacaccggcctccagcttacagaaagcaccacaaga
accatctcacctgaacacctgcagctcactgatcctgatacagccttagagaacctcacc
tacactgtcattcaaccaccacagtatggcaagctactgttaaaggggtttcccatgccc
tggacccgcttcacacaattagacatcaacaacatgcttctgagctaccagcatcttaac
agctttgctaagattgacaggttcacctttcagccatcagatggaaccaataaaggttat
ctggaatacggacagctgaaggagcaagcggcagttttcacaatacagatagaggtcttg
gacaagtcccctccacacattgtaaccaaagggacccccagtacagtggaatatctacag
aacaaccaacatggcatctatattacctccaaagacctccaggcttcagatccagacagc
ccttaccaggaactggagttcatcatcacacggccaccacattttggataccttgagaac
gccatcacaggaggctatatcaaaggacgtttcacccagaaggatgtggatcagaaagca
gtccgctacatcattccctcagacatggaagtgacagcagacagctttgagttccagctc
actgaccgagcgggaaacatcatgcttccagaagtaatggagctccgatggtcccgggtg
gagttgacggcttcctgttatcgtgtgtgtgagaacgcaggaactctagctgtgcaggtg
atacgcagtgggaacagcatagaccctgcctatgttggcatcaaggtggaagatggcaca
gcaaaggtgggaaaggacttcactcacagctcggctagtctgatacagtttgatccagga
gtctctgtcaaattttggaatatttacctcaaagatgatgggctggaggagaaccatgag
aggctggaggtggtgctgaaagcccagaagaacgctgtcttaggtgcgagaatcagagcc
tcagtggagattgtggatcccagacatggtagatgtgacccagatgccctgattattgat
tatgacgagaagaaatctcctgtcctacaacctccacgaatccacaaacctccacctcca
ccaacactaggagcagcagaagaagactacacaccagacccaaacactgggattgtatgg
gagaactatcagccaagaggagatgtcccatatcgaacacagttcattcgcttcagcggt
ggggaggcagctgaccagccattcctcagccaaggaaggagacagctaagactactggga
aacaatagatctggagtgagacaggaaacttcacatacaaaatggctccataggttgact
ccaataaggcctgagttggagataccagtaccccgcgtccacccagaacttgagatcagt
ccaatctggaactggcctggatatactgctgcctccagatcagccgaaactcctcagaga
gacacttttcttactggcttcacttcagctgtacaccagcacaagtctgcaaaagctatt
agtgttggctgtcttcatggttggacccattacagacagcgctgttacatcctgggacca
ggtgtagccagctggaggaatgctcagaatgcatgcacagttcttgacagtcacttaaca
agtgttcgttcaaagaatcatatgaagtggctatggaggtttgctggaaaacaaccattt
tggattggactttctggatctccagaccgatggttttgggccgacagcacaccactgaaa
ttttccagacttaagaagaacaaggcttcagataatcatgcccccaatggctcctctcac
agctgtgtgctagcccgtgaccaaaaaacatggactagagaaaattgtacaacaatagca
gaacacaaatatatttgttcagcaggtgcagaagttaacaaataa
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