Ictalurus furcatus (blue catfish): 128613946
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Entry
128613946 CDS
T09387
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128613946 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ifu04147
]
128613946 (copb1)
Membrane trafficking [BR:
ifu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
128613946 (copb1)
Exosome [BR:
ifu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
128613946 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT_2
HEAT
Cnd1
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
128613946
NCBI-ProteinID:
XP_053491118
LinkDB
All DBs
Position
10:complement(31471118..31485639)
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AA seq
953 aa
AA seq
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MTAAENVCYTLINVPSDSEPPSEVSLKADLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLTTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDSLRALIIEKMLEVFHAIKTVKIYRGALWILGEYCSTKEDIQNVMTEVR
RSLGEIPIVENEIKKEAGELKVEEEVSAGPVQKLVTEMGTYATQSALSSNRPSKKEEDRP
PLRGFLLDGDFYVAASLATTLTKIALRYIAIVTDKKKQNSFVAEAMLIMATVLHLGKSSL
PKKPITDDDVERISLCLKVLSESSPLMSDIFNKECRRSLSHMLTVRLEEEKLSQKKESEK
RNVTVQADDPISFMQLTAKNETSSKEDQFQLSLLAAMGNTQRKEASDPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNITELNDYLQHILSSTNMKCLTPEKALSGVCGFMAANLYARSI
FGEDALANVSIEKPILLGPEAPVNGHIRIRAKSQGMALSLGDKINLSQKKTLS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagcggagaacgtgtgttacaccctgatcaatgtcccaagcgactcggagcct
ccgtcagaagtcagccttaaagctgatttggaaaagggggagataaaagccaagacggag
gcgctgaagaaagtcatcatcatgatcctgaacggtgagaagctgcccggtctgctgatg
accatcatccgctttgtgcttcctcttcaggaccacaccatcaagaaacttctcctggtc
ttctgggagatcgtacccaaaaccactcctgatggaaaactgcttcaggagatgatcctg
gtctgtgatgcctacaggaaggatcttcagcacccgaacgagtttatccgtggctccaca
ctgcgcttcctgtgtaagctgaaggaggcggagcttttggagccgttgatgccggctatc
cgcgcctgtctggaacatcgccacagttacgtacgccgcaacgccgtcctcgccatctac
accatctacagaaattttgagcatttaatccccgacgctccagaactgatccatgacttc
ctggtaaacgagaaagacgcgagctgtaaaagaaacgccttcatgatgctgatccacgcc
gatcaggaccgagctctggattatctcagcacgtgtatcgatcaggttcacacattcgga
gacattctgcagctggtgattgttgaactcatctacaaggtgtgccatgctaacccgtca
gagcgagctcgcttcatccgctgcatctacaacctgctgcagtcgtccagtccagctgtg
aaatacgaagctgctggaactctggtcactctgtccagcgctccgactgccatcaaggct
gcagctcagtgttatattgacctgatcattaaggagagcgataacaacgtgaagctgatc
gtactggaccgcctcatcgagctgaaggagcatcccactcacgagcgtgtgctgcaggac
ctggtgatggacatcctaagggttctgaccactcctgacctggaggttcgcaagaagact
ctgcagctggcgctggacctggtgtcatctcgtaacgtggaggagttggtgattgttctg
aagaaggaagtgatcaagaccaacaatgtgactgaacatgaagacactgataaataccgc
cagctgttggtcagaactctccactcctgcagtgtacgcttccctgacatggctgctaac
gtcatccctgtgctgatggagttcctcagtgacactaacgaagcagccgctgctgatgtg
ttagagtttgtgcgtgaggcgatacagcggttcgactcgctccgagcgctcatcattgag
aaaatgctggaagtttttcacgccattaaaacggtcaagatttaccgaggagcgctgtgg
attctgggagagtactgcagcaccaaagaggacatccagaatgtcatgactgaagtgcgg
aggtcactcggagagatccccatagtggagaatgagataaagaaggaggcgggggagctg
aaagtggaggaggaagtgagcgcagggccagtgcagaagctggtgactgagatgggaacc
tacgccactcagagcgctctcagctccaatagaccctcgaagaaagaggaggacaggcct
cctctgaggggtttcctgttggacggggatttctacgtcgctgcgtctctcgccaccacg
ctgactaaaatcgcactgcgctacattgccatcgttacagacaagaagaagcaaaactcg
tttgtagctgaagccatgctgatcatggccaccgtgctccacctggggaaatcttcactg
cccaagaagccgatcacggacgacgacgtggagcgaatctctctgtgcctgaaggttctg
tccgagtcctcaccgctcatgagtgacatcttcaacaaagaatgccgcaggtccctgtcc
cacatgctgactgtacgactggaggaggagaaactctctcagaagaaagaatcggagaag
cgtaacgtgacggtgcaggccgacgaccccatctccttcatgcagctcaccgccaagaac
gagacgagctccaaagaggaccagttccagctcagtctgctggccgctatgggcaacacg
cagaggaaggaagcgtccgacccgctcgcctccaaactcaacaaggtgacgcagctgact
ggtttctcagatccggtctatgctgaagcatatgtccacgttaaccagtatgacatcgtg
ctggatgtgctggtggtcaaccaaaccagtgacaccctgcagaactgcactttggaactg
gccacattgggtgacctgaagctggtggagaagccgtctcctctcactctcgctcctcat
gactttgccaacatcaaggccaacgtcaaagtggcttccacagaaaacggcatcatcttc
gggaatatcgtgtatgatgtgtcgggagcagccagtgacaggaactgtgtggttctcagt
gacatccacatcgacatcatggactacatccagccggcttcctgcacagacgctgagttc
agacaaatgtgggcggagtttgagtgggagaacaaggttacagtgaacaccaacatcacc
gagctgaacgattatcttcagcacattctcagctccaccaacatgaagtgtttaactcca
gagaaggctctctctggggtttgtggtttcatggctgctaacctgtatgctcgctctatc
tttggcgaggacgctctggctaacgtgagcatcgagaagcccattctcctcggacctgag
gctccggtcaacggccacattcgcatccgtgccaagagccagggcatggccttgagtctg
ggagataagattaatctgtctcagaagaagaccctctcgtaa
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