KEGG   Ictalurus furcatus (blue catfish): 128614036
Entry
128614036         CDS       T09387                                 
Symbol
wdr48a
Name
(RefSeq) WD repeat-containing protein 48a isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    128614036 (wdr48a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ifu03400]
    128614036 (wdr48a)
DNA repair and recombination proteins [BR:ifu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     128614036 (wdr48a)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_Vps41 WD_LRWD1 Beta-prop_IP5PC_F WD40_RFWD3 WDR54 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Nucleoporin_N WD40_like RAWUL Beta-prop_RIG_1st Tfb2_C
Other DBs
NCBI-GeneID: 128614036
NCBI-ProteinID: XP_053491265
LinkDB
Position
1:27879328..27900907
AA seq 680 aa
MLSTCKMATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSII
RIWSINQHKDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRT
HKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLA
MNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIR
LWSLGQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKA
PVLKMELDRSADPPAAIWVSTTKSTVNKWSLKGIHNFRASGDYDNDCSTPLTPLCTQPDQ
VIKGGASIIQCHILNDKRHILTKDTNNNIAYWDVLKACKVEDLGKMEFDEEIKKRFKMVY
VPNWFSVDLKTGMLTITLDESDCFAAWVSAKDAGFTSPDGSDPKLNLGGLLLQALLEYWP
RTHNSPMDEETELNHVNGEHENRIPKGNGYFQVPPHTPVIFGEAGARTLFRLLCRDSGGE
TESMLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKV
MEHVYEKIINLDSESQMSGSAGEKPSEQKEDEDMAVLAEEKIELLCQDQVLDPNIDLRTV
KHFIWKSGGDLTLHYRQKST
NT seq 2043 nt   +upstreamnt  +downstreamnt
atgctgtcaacatgtaagatggcgacccatcacaggcagaatgctgccgggcggagaaaa
gtgcaggtgtcgtatgtgatcagagatgaagtggagaaatacaaccgtaatggagttaat
gctctacagctggacccagctcttaaccggctcttcaccgctggtcgagactccatcatc
cggatatggagcatcaaccagcacaaggacccatacatagcatcaatggaacatcacaca
gactgggtcaatgacatcgtcctctgctgcaacggaaaaactctaatatctgcttcatca
gacaccactgtgaaagtctggaatgcacataaaggattttgtatgtcgacactgcggaca
cataaggattatgttaaagctttagcgtatgctaaagataaagagctggtggcttcggca
gggctggacagacagatcttcctgtgggatgtaaacacactaacagcactgactgcttcc
aataatactgtcactacatcgtctctgagtgggaataaagattcgatctacagtctggcg
atgaatcagatgggcacagtaatagtatctggatcaactgagaaggttttgagagtgtgg
gacccacgcacctgtgccaagctcatgaagctgaaaggacacacagacaacgtgaagtca
ttgctgctgaacagagatggcactcagtgcctgtcgggtagttcagatggtacgatccgg
ctgtggtcactgggacagcagaggtgtatagccacgtaccgtgtccatgatgagggagtg
tgggcactacaggtaaacgaagcctttacgcacgtctactccgggggccgggaccggaag
atttactgcacagacctgcgtaatccagacatacgtgtgctcatttgtgaagagaaggcc
cctgtccttaagatggagctggacaggtcagcggacccaccggccgccatctgggtctcc
acaacaaagtctactgttaacaaatggtctctaaagggcatccacaatttccgagcatct
ggcgattacgacaatgactgcagtactcccctgacaccactgtgcacacagccggatcag
gttattaaaggtggagccagtataattcagtgccacattctgaatgataagagacatata
ctcaccaaagacaccaacaacaacatagcatactgggatgtgttaaaggcatgcaaagtt
gaagatttgggaaagatggagtttgatgaggagatcaagaaacggtttaagatggtttat
gtgcccaactggttctctgtagatcttaaaacagggatgctgactattacactcgatgag
agtgattgctttgccgcttgggtctcggccaaggatgctggatttaccagtccagatggc
tcagacccaaaattgaatctgggtggactgctgctccaagccctgctggaatattggccc
aggacgcacaacagccctatggatgaggaaactgagctgaaccatgtgaatggcgagcat
gagaacaggataccgaaaggaaatggttatttccaagtgccaccacacactcctgtcatt
tttggtgaagcaggagctagaacactgttcaggttgctctgccgagactctggaggcgag
accgagtccatgctgctcaatgaaacggttccacagtgggtgattgacatcacagtggat
aaaaacatgccaaaattcaacaaaatcccgttctacctccagccccattcttcatctggt
gccaagacattgaagaaggatcgtctgtcagctagtgacatgctccaggtgagaaaggtg
atggagcatgtttatgagaagatcattaacctagacagcgagtcccagatgagtggttca
gctggagagaagccaagtgagcagaaagaggatgaagacatggcagtgctagctgaagag
aagatagagctgctctgtcaggaccaggttctggatcctaacatagatctgcgaacagta
aagcatttcatttggaagagcggcggcgacctaacgcttcactacaggcagaagtccaca
taa

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