Ictalurus furcatus (blue catfish): 128614112
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Entry
128614112 CDS
T09387
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128614112 (lingo3a)
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
128614112 (lingo3a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_LRWD1
LRRNT
V-set
LRR_9
EGF1_RECK
Motif
Other DBs
NCBI-GeneID:
128614112
NCBI-ProteinID:
XP_053491381
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All DBs
Position
10:3624605..3649433
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AA seq
604 aa
AA seq
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MAVYPVLGLLGLLLLQITLPICHGQGCPQVCDCVSQRKFVNCQNKHLNSFPNGIPTDTRF
LDLSRNKLRWVEHGDLEAYTHLEDLDLSENLISVLEPNAFSRLLNLRVLCLRANQLKLVP
MGAFSHLANLTDLDLSGNKLVILVDFTFQDLRRLQKLEVGDNDLVYISNKAFLGLTGLQE
LTIERCNLTSISGQALSYLHGLVSLRLRYLNIVSLEEQNFQKLGGLRGLEIDHWPFLEYI
SPYSFQGLNLSWLFITNTNITTVPTGALRNLINLGSLNLSHNPISVLESWALRDLVNLKD
LHLVGTNLMRVQPYGLGGLQQIRLLNLSNNRLVTLEEGSFHSVNTLEMLRVDGNPLSCDC
RLLWILQRRKTLNFDGKFPVCAGPIEVQGKALSAFSDSALLDHFTCQRPKIRNRKLQQIS
AREGQVVSFFCQADGEPTPTIFWISPQRRRITTRSTGRLMVLPEGTLEIHYVQVTDSGTY
ICIASNAGGNDTYFATLTVSGLPLDAGLSVNRTYTGDLNDTNLNDTRVFLKFTLDLKTIL
ISTAMGCITFLGVVVFCFLLLFVWSRGRGQHKNNFSVEYSFRKVDGPTTSGGQGGARKFN
MKMI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttatcctgtcttgggcttgctgggccttctactgctacagatcacacttccc
atatgccatggccaaggttgtccacaagtctgtgactgtgtatcccagagaaagtttgtg
aattgtcagaacaagcaccttaattcttttccaaatggaattccaactgacacaaggttt
ctagacctcagtagaaataagttgcgttgggtggagcatggtgacttggaagcctacaca
catttggaggacttagaccttagtgaaaatctcatcagtgtgcttgagcccaatgctttt
tcccgcttactgaatctacgtgtgttatgcttgcgtgccaaccagttgaagctggtgcca
atgggtgccttctcacatcttgccaatctcacagatttggacttgagtggaaataaattg
gttattttggtagattttacttttcaggatctgaggaggctccaaaaattggaggtgggt
gacaatgatttggtatatatatcaaacaaggcattcctgggcttgactggtctacaggag
cttaccattgagaggtgcaacctgacctctatctcaggacaggctctttcctatctccat
ggcttggtgtcactacgattacgctacctcaatattgtctcgttagaggaacaaaacttt
caaaagctgggtggtctgcggggtctagagattgatcactggccatttttagagtacatt
tccccatacagtttccagggcctcaatttatcgtggcttttcattaccaacaccaacatt
actacagttccaactggtgccctacgtaatcttattaatttgggcagtctgaatctctca
cacaaccccatttctgttcttgaatcttgggctttgcgcgatctggtcaatttgaaggac
ttacaccttgtgggcaccaacttgatgcgtgttcagccatatggccttggaggtcttcag
cagatacgtttgctcaacctgtccaacaataggttagtaacgctagaagaaggctctttt
cactctgtaaacaccctggaaatgcttcgggttgatggtaaccctctgtcctgtgactgc
cgtctgctatggatcttgcagcgccgcaagacccttaactttgatggcaagttcccagtt
tgtgcaggacccattgaggtacaaggtaaagctctcagcgcattctctgactcagcactc
cttgaccacttcacatgccaacgaccaaaaatccgcaaccgaaaactacaacagatatct
gcacgtgagggtcaggttgtatcatttttttgtcaagcagatggagaaccaactccgacc
atcttctggatttcacctcagcgccgccgcatcactactagaagcactggtcgtcttatg
gttttaccagagggcacattagaaatccactatgtccaagtaacagatagtggaacctac
atatgcattgccagcaatgcaggtggcaatgacacctactttgccacattaactgtcagt
gggctacccttggatgcaggcctttcagtgaatcgcacgtatactggtgacctcaatgac
actaatctgaatgacacgcgtgtcttcctaaagttcacactagacctcaagacaattttg
atctccacagcaatgggttgtataacatttttgggtgtagtcgtcttctgcttcttgctt
ttgtttgtgtggagtcgtggacgtggacagcacaaaaacaacttttcagtggagtactcc
ttcagaaaggtagatggccctacaaccagtgggggccaaggaggggctcgaaaattcaat
atgaaaatgatatag
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