Ictalurus furcatus (blue catfish): 128614137
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Entry
128614137 CDS
T09387
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
128614137
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ifu01009
]
128614137
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ifu04515
]
128614137
Protein phosphatases and associated proteins [BR:
ifu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128614137
Cell adhesion molecules [BR:
ifu04515
]
Cadherins
Protocadherins
128614137
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
CD34_antigen
Adeno_E3_CR2
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
128614137
NCBI-ProteinID:
XP_053491416
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All DBs
Position
10:26923147..26927155
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AA seq
885 aa
AA seq
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MCNIRKGSCFVRKGKFWGFWILLLYTSPLSCFSKFSHLVYKIKEGLPKGILIGSIGEDLK
LDFSVDPPRLFHLELRQSGSQYVNLSDTAGELYTSALEIDREALCADSHEGQGCTISLDV
IILPQQYFQLVKIKIVIEDVNDNTPHFPVDEIRVSVPENAPVNARFVVEQSAVDPDIGIY
GVQTYWLANDFGVFTLDVEQNEGGELTPFLIVTGPLDRETKAEYLTELIAEDGGSPPFLG
TATFRIIIGDVNDNCPKFIETQVNVTLSENTTKGSQLARLYAFDPDQGTNAQIAYAFSKR
VTRETRNLFHLDEITGVIKLAEKIDSDTGKLYKLVVLANGPACIPDIATVTVKVVKQVSG
PPAVIPRYIASEKDGVVSLSESEPPFTPIAFFTIKNADPKKKVTCFLQGLGPFRILPYKN
VKNEYLLETTDQLDYEKQKYYELTVVVRNTDGVGVEKQVKVQMLDDNDNAPIFKQSVIDI
KIEENNAPDTFLTKLQATDEDSGNRGEVLYLLGSDVPPIFHLERLTGVLTVTTSLDREEK
ETYRFIVRAVDCGTPRKESIATVSITVLDRNDNSPRFINKDFTFFIPENFPGFGEIGVLS
VTDADAGENGWVALSIINGSDIFVIDTGRGALRAKTPLDREQQGTYYLWVEAVDGGKPAL
SSVTMVTVLLLDVNDNPPVVLFPQSNQSYLLVLPSTLPGTSITEVYAVDRDTGMNAVIAY
SIIKRRGGEPGSFDIDPDTGNITLRKVLSDRGLYSLLVKVSDHGQPEPLHSTVLVNLFVN
ETISNETYIQSLLTREADIGIEEVRPPNRLAQGPEYSELFSCKLLLIALSTTCLGLLLIV
VSLTAYICCKRQKHHKKKRLEVEIPLKMNSDRQVMDRKLMEISNI
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaacatacgcaaaggttcctgctttgttaggaaaggaaagttctggggtttttgg
attctcctgctgtacacaagtcctctttcctgcttttcaaagttcagccatcttgtctat
aaaataaaggaaggcttacccaaggggattctcatcgggtctattggagaagatttaaag
ttggatttctctgtcgacccccctcggctgttccatctggagttaaggcagagtggctct
cagtatgttaatctaagtgatacagccggggagctatacacgtctgctttggagattgac
cgagaggctctgtgcgcagattcccacgagggtcaaggatgcactatctctctggatgtg
atcattctgccacagcagtacttccagctagttaagatcaaaatcgtcattgaagatgtt
aatgacaacacgccacatttcccagtggacgagatcagggtgtctgtgccggaaaatgca
ccagtcaatgctcggtttgtggtagagcaatctgctgtagacccagatataggaatttat
ggggttcagacttactggctggctaacgactttggagttttcacactggacgttgagcaa
aatgaagggggagagttgacgcctttcctgatcgttactgggccgctggacagggaaacg
aaagcggaatatttaactgaattaatcgctgaggatggaggctccccgccatttttgggc
actgccacttttagaattatcatcggagatgtaaacgacaattgccccaaattcatcgag
actcaggtgaatgtgacactttctgaaaacaccacaaagggctcacagttggcccgtctc
tatgcctttgacccagatcagggtaccaatgctcaaattgcttacgctttcagtaaaagg
gtcacccgagaaactaggaacctgtttcatttggatgaaatcacaggggtcatcaagcta
gctgaaaagattgattctgacactggaaagttgtacaagctggttgtgctggctaatggg
ccagcttgcataccagatattgccactgtcactgtgaaggttgttaaacaggtttcggga
ccaccagctgtcataccccgttacattgcttcagagaaagatggtgtggtttctctgagt
gaatcagagccaccctttacaccaattgctttcttcaccataaagaatgcagacccaaag
aagaaggtgacgtgctttttgcaagggcttggacccttcaggattttgccatataaaaat
gtgaaaaatgagtacttgctggagactactgatcagttggattatgaaaaacagaaatat
tatgaactcactgtggtggtcagaaacacagatggtgtaggtgttgagaaacaggtgaaa
gtgcaaatgttggatgataatgacaacgcacccatatttaagcagtcagttattgacatc
aaaattgaggagaacaacgctcctgacacatttctcactaaactccaggccactgatgag
gacagcggtaacaggggtgaggtactctatcttcttgggtcagatgttcccccaatcttc
caccttgaacggttgactggggtcttgaccgtgaccacatctcttgacagagaggagaaa
gagacctaccgttttatagtccgagcagttgactgtggcacaccaaggaaggagtcaatt
gccacagtttcaatcaccgtgctggatcgcaacgacaatagtcctcgtttcatcaacaaa
gatttcaccttcttcatcccagagaacttcccaggatttggggagattggcgtgctgtct
gtcacagatgcagatgctggggaaaatggctgggtggcactgtcaatcatcaatggaagt
gacatatttgtcatcgacacaggacgtggggctttgagagcgaagaccccactggacagg
gagcaacaaggaacatactatctctgggttgaagctgtggatggaggtaagcctgcactc
tcctctgtcaccatggttactgttttgctcctggacgtcaacgacaacccaccagtggtg
ctgtttccccaatcaaaccagtcttacttgctggttcttcccagtacactcccaggaaca
tccattacagaggtctacgccgtggaccgggacactggcatgaacgctgtcattgcgtac
agcatcatcaagcgtaggggtggtgaaccaggctcatttgacatagacccagatacggga
aacatcaccctcaggaaagtcttgagtgaccgtggcctgtacagcctgctggtcaaagtc
agtgaccatggccaacctgaaccactccactccactgttttggtcaacttgttcgtcaat
gagaccatcagcaacgagacatacattcagagcctcctgaccagagaagcagatatcggg
attgaggaggtcagaccaccaaataggctcgcccaggggccagagtatagcgaactcttc
tcctgcaagctattacttattgcccttagcaccacctgtctggggcttctccttatagtg
gtgtcactgactgcatacatatgctgtaagaggcaaaaacatcataaaaagaagagattg
gaagtagagatccctttaaaaatgaacagtgacaggcaagtcatggacagaaaactcatg
gaaatttctaacatatga
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