KEGG   Ictalurus furcatus (blue catfish): 128614238
Entry
128614238         CDS       T09387                                 
Symbol
snrpa1
Name
(RefSeq) U2 small nuclear ribonucleoprotein A'
  KO
K11092  U2 small nuclear ribonucleoprotein A'
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128614238 (snrpa1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ifu03041]
    128614238 (snrpa1)
Spliceosome [BR:ifu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    128614238 (snrpa1)
 Complex B
    128614238 (snrpa1)
 Complex C
   U2 SnRNP specific factors
    128614238 (snrpa1)
SSDB
Motif
Pfam: LRR_9 DHU1_N LRR_8 LRR_4 LRR_14 LRR_NXF2 LRR_NXF1-5
Other DBs
NCBI-GeneID: 128614238
NCBI-ProteinID: XP_053491592
LinkDB
Position
10:complement(22223035..22229864)
AA seq 285 aa
MVKLSAELVEQAAQYTNPVRDRELDLRGYKIPVLENLGATLDQFDTIDFSDNEIRKLDGF
PLLRRLKTVLMNNNRICRIGENLEHSLPNLKELILTSNNIQELGELDPLASVKTLTLLSL
LRNPVTNKKHYRLYVINKLPQIRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIAKRTKT
FTPGAGLQAEKVKSGPSAADVEAIKAAIANATSLAEVERLRGMLQSGQIPGRESRQGAQS
MVEEEEEDEPEMGMQESVPMYNATGDAMEDDGVENGEEDMHVNGS
NT seq 858 nt   +upstreamnt  +downstreamnt
atggtgaagttgtcggcggagttggtcgagcaggctgctcagtacacgaatccggtccga
gacagagagctggacctccgaggttataaaatcccggttttggagaacctcggcgccact
ctggatcagtttgataccatcgacttttccgataatgagatcagaaagctggacggattt
cctctgctcaggagactcaaaactgtgctgatgaacaacaaccgcatctgccggatcggt
gaaaatctcgagcactcgttgcccaatcttaaggagctgatccttacaagtaacaacatc
caagagctgggtgagctggatcctctcgcttcagtaaagaccttgactcttctcagtctc
ttaaggaacccagtaaccaacaagaagcattacaggctgtatgtcatcaacaaacttcca
cagatccgcgttctggatttccagaaggtgaaattaaaggaacgtcaagaggctgagaaa
atgttcaaaggaaaacggggcgctcagcttgcaaaggatattgccaagcgcacaaaaacg
ttcacgccaggagccggactgcaggctgagaaagtgaaatcggggccttctgcggcagac
gtggaagccattaaggctgccattgcaaatgccacatcgctggctgaggtggagaggttg
aggggaatgttgcagtccggtcagatccccgggagggaaagcagacaaggtgcacagagc
atggttgaggaagaagaggaagatgagcctgaaatggggatgcaggagtctgtgccgatg
tacaatgccactggggatgcgatggaagatgatggagtggaaaacggagaggaagacatg
cacgttaatggatcgtag

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