Ictalurus furcatus (blue catfish): 128614269
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Entry
128614269 CDS
T09387
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03082
ATP-dependent chromatin remodeling
ifu03083
Polycomb repressive complex
ifu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128614269 (rbb4l)
03083 Polycomb repressive complex
128614269 (rbb4l)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
128614269 (rbb4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128614269 (rbb4l)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
128614269 (rbb4l)
Histone modification proteins
HAT complexes
HATB complex
128614269 (rbb4l)
HDAC complexes
Sin3A-HDAC complex
128614269 (rbb4l)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
128614269 (rbb4l)
PRC2.2
128614269 (rbb4l)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
128614269 (rbb4l)
Heterochromatin formation proteins
Other heterochromatin formation proteins
128614269 (rbb4l)
Chromatin remodeling factors
NuRD complex
128614269 (rbb4l)
NuRF complex
128614269 (rbb4l)
NuRF complex (fruit fly)
128614269 (rbb4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD40_RFWD3
ANAPC4_WD40
Beta-prop_RIG_1st
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
128614269
NCBI-ProteinID:
XP_053491639
LinkDB
All DBs
Position
10:complement(6391483..6401825)
Genome browser
AA seq
425 aa
AA seq
DB search
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDY
AVHRLVLGTHTSDEQNHLVVASVQIPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI
NHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGY
GLSWNPNLSGNLLSASDDHTICLWDISGSPKEGKIVDAKTIFTGHTAVVEDVSWHLLHES
LFGSVADDQKLMIWDTRSNNTAKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPASEL
ESQAS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaagaagtgtatgatgatgccgtagaggagcgggtaataaacgaagaatac
aaaatatggaagaaaaacacaccgtttctctacgacctggtcatgacacacgctctcgaa
tggccgagtctaacggtgcagtggttgcctgatgtgagcagacccgagggaaaggattat
gcagttcacagactggtgttgggaacacacacttcagatgagcagaaccacctggtcgtt
gccagtgtgcagatccccaacgatgacgctcagttcgatgcgtctcactacgacagcgaa
aaaggagagtttggaggctttgggtctgtgagcggaaagattgagatcgagataaagatc
aatcatgagggtgaggtgaaccgggcgaggtacatgccacagaacccctgcataatcgcc
acaaagactcctacatctgatgtgctagtctttgactacactaaacatccatccaaacca
gaccccagcggcgagtgcagtccagacctgagactccgaggccatcagaaggagggctat
ggtctttcctggaaccccaacctgagtgggaacctgctcagcgcatcagatgatcatacg
atctgtctatgggacatcagcggatctcctaaggaaggaaagatcgtagatgccaagacc
atcttcacaggccacaccgccgtagtggaggacgtgtcctggcaccttctgcacgagtcg
cttttcggctcagtggccgacgaccagaagcttatgatctgggacacgagatccaataac
acagctaagcccagccactcagtggatgctcacactgctgaagtcaactgcttgtccttc
aatccctacagcgagttcatcctagccaccgggtctgcagataagactgtggccctgtgg
gatctgcgcaacctgaagctgaagcttcactctttcgagtcacacaaggatgaaatattc
caggttcagtggtctcctcataacgagacgatcctggcctccagtggaacagacaggcga
ctcaacgtctgggacctgagtaaaattggagaggaacagtctgctgaggatgctgaagat
ggacctccagaactgctgtttattcacggcggccacacggcgaagatctccgatttctca
tggaatcccaacgagccctgggtgatctgctccgtttctgaagataacattatgcaagtt
tggcaaatggctgaaaacatctacaacgacgaggaaccagacactcctgcctccgagctc
gagagccaggcctcataa
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