Ictalurus furcatus (blue catfish): 128614285
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Entry
128614285 CDS
T09387
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04517
IgSF CAM signaling
ifu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128614285 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128614285 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ifu04812
]
128614285 (sptbn1)
Cytoskeleton proteins [BR:
ifu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128614285 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
128614285 (sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
PMC2NT
Motif
Other DBs
NCBI-GeneID:
128614285
NCBI-ProteinID:
XP_053491661
LinkDB
All DBs
Position
10:26763897..26847867
Genome browser
AA seq
2349 aa
AA seq
DB search
MTTVAAEYDHMDIQQQYQDTVNNRWDEEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGEKLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVVTEDNKEKRSAKDALLL
WCQMKTAGYSNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVQAV
VAVAKELEAENYHDIKRIAARKDNVLRLWDYLLELLKARRQRLEMNLGVQRVFQEMLYIM
DWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVRAVNANAQKFAVDDEGY
KPCDPQVIRDRVAHLEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQIL
SSDDVGKDLTGAVRLLSKHRALEDEMSGRAGHLQHTVREGQAMADAGHFGEAKIRERVAD
VQAQWTALERLAAVRKARLEQACSLHQFQADADDVDAWMLDALRIVSSDDVGHDEFSTQA
LVKKHKDAVADVASYRPVIDSLHEQAQALPDELAQSTDISERLAGIEERYKELAEITRLR
KQALQDALALYKMFSEADACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQ
ASRVAVVNQIARQLIHSGHPSEKDIKAQQDKLNTRWSQFRDLVDQKKESLNSALGVQNYH
LDCNETKSWIREKTKVIESTQDLGNDLTGVMALQRKLTGMERDLAAIEAKLGDLRGEAER
LAAEHPEQAKAITGRLAEIGGVWEELKDTLQNREASLGEASKLQQFLRQLDDFQSWLSRT
QTAIASEDMPNTLAEAEKLLAQHEGIKHEIDNYEEDYQKMRDMGEMVTQGQTDAQHMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAETFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEEKINGVVEAGRRLASDGNINAEKIQERATSIDDRHKKNR
EAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELQSNKEWLEKIDKEGMQLVSEKPETEAVVKEKLTVLQTQWQELESTTQTKAQCLFDANK
AELFTQSCADLDKWLAGLEGQIQSDDYGKDLTSVNILLKKQQMLEKQVEVRKREVEELQS
QAHVLQQEGKDTDEVDGRREVVEKKLQELLDPLQKRKNFLMASREIHQFNRDVEDEILWV
EERMPLATSTDHGHNLQTVQMLIKKNQTLQKEIQGHQPRCDDIFERSESIVTEDTPSVEA
IRARLAELQDLWNLLIQETAKRHERLEEAHQAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSSVAMLKKHQILEQAMEDYADTVHQLSKTSRGLVADNHPESERIGMRQSQVDKLYAG
LKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDGVNRMADDLINAGHADAATVAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDVKEILSRILDKHKKLPEELGRDQNTVEALQRMHTTFEHDIQALGTQVRQ
LQDDATRLQSAYAGDKADDIQRRESEVLDAWRNLLEACEGRRARLLDTGDKFRFFNMVRD
LMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLARKH
YASDEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSS
KEVGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRRQEEEERRRKPPT
PEPEQEIEAQQREGEQIAQNGLPSDQESPRDGVDGEIVNGVPERSSKEPSPIPSPTSGRR
GKGSQSSTLPAKSQESPSAQLEGFLHRKHEFEGHNKKASNRSWHNVYCVINNQEMGFYKD
NKNAGQGIPYHNEIPVSLKDAVCEVAIDYKKKKHVFKLRVTNGNEYLFQAKDDEEMNTWM
QAIQNAVSGSSPSDKSDVTPSNQSTPASSRAHTLPATVTLTTESSPGKREKDKEKDKEKR
FSLFSKKKQ
NT seq
7050 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgccgaatatgaccacatggacatccagcagcagtaccaggatact
gtcaacaaccgctgggatgaggagtgggacaacgagaacagctcggcccgcctgttcgag
cgctcacgcatcaaggccttagcagatgagcgtgaggcggtgcagaagaagaccttcaca
aaatgggtcaactcacacctggcacgggtctcctgccgcatcacagacctgtacatggac
ctacgggatggacgcatgcttatcaagctcctggaggtgctctctggagagaagctgccc
aaacccacgaagggccgaatgagaatccactgtctggagaatgtggataaagccctgcag
ttcctaaaggagcaacgtgtccacctggagaacatgggctcccatgacatcgtcgatggc
aaccatcgcctcacgctcggcctcatctggaccatcatcctccgcttccagatccaagac
atcagcgttgtaacagaagacaataaagagaagcgttcggctaaagacgctctgctcctg
tggtgtcagatgaagacggcaggctattcaaatgtcaacatccacaacttcaccaccagc
tggcgcgacggaatggcgttcaacgccctcatccacaaacacaggccggatcttattgat
tttgacaagctgaagaagtccaacgctcactacaatcttcagaatgccttcaacttggcc
gagcagcacctgggcctcactaaactgctcgaccctgaggatatcagcgtagaccatcct
gatgagaagtcagtcatcacctacgtcgtcacatactaccactacttctccaaaatgaag
gctctgaaggtggagggcaaacgtattggcaaagttctggataacgccatcgaaacagag
aagatgatcgagaaatacgagtctcttgcgtcggaccttctggagtggatcgagcagacc
atcatcatcctgaacaaccgcaagtttgctaattctctagtaggagtccagcagcagctc
caggccttcaacacgtaccgcactgtagagaagcctcccaagttcacagagaaaggtaac
ctggaagtccttctgttcacgatccagagcaaaatgagagccaacaaccagaaagtctac
atgccgagggagggcaagctcatctccgacatcaacaaggcctgggagcgtctggagaag
gcggagcatgagcgtgagctggccctgaggaacgagctgattcgtcaggagaagctggag
cagctggcgcgccgcttcgaccgcaaggcggccatgagagaaacctggctcagcgagaac
caacggctggtgtcacaggacaacttcggcttcgacctccaggcagtggaggcggccacc
aagaagcacgaagccatcgagacggacatcgcagcctacgaggagcgtgtgcaagccgtg
gtggccgtagctaaagagctggaagcggagaactaccacgacatcaagcgtattgcggca
cgtaaggataacgtgctgcggctctgggactacctactggagctgctgaaggcacgcagg
cagaggctggagatgaacctgggtgtgcagcgtgtcttccaggaaatgctctacatcatg
gactggatggatgagatgaagatgctactgctgtctcaggactacgggaagcacttgctg
ggagtggaagatctgctccagaaacacgctctggtggaggctgatatcgccatccaggcc
gaccgagtgcgggccgtcaacgccaacgcacagaaattcgctgttgatgatgaaggttac
aagccgtgtgatccgcaggtgatccgtgatcgcgtggctcacctggagttctgctaccag
gagttgacgcagctggcggctgagcgacgcgcacgtctggaggagtctcgtcgactctgg
aagttcttctgggaaatggctgaggaggagggttggatccgtgagaaggagcagatcctg
tcatcagacgacgtcggcaaggacctgactggtgccgtgcgtttgctgagtaagcaccgg
gcgcttgaggacgagatgagtggccgagccgggcacctgcagcacacggtgcgtgagggt
caggcgatggctgacgccggacactttggcgaggccaagatccgcgagcgtgtggccgat
gtgcaggctcagtggacggcgctggagcgactcgctgcagtccggaaggcacgtctagag
caggcgtgcagcttgcaccagttccaagctgatgctgacgatgtggacgcctggatgctg
gacgcgctgcgcatcgtctcgagtgacgacgtcggccacgatgagttctccacgcaggcg
ctggttaagaagcacaaggacgcggtagccgacgtggccagctaccggcccgtgatcgat
tcactccacgagcaggctcaggcactgcccgatgagctggcccagtcaaccgacatcagc
gaacgcctggcgggcatcgaggagcgctataaggagctggcagagatcacccggctgagg
aagcaggctctgcaggatgcactggctctctataagatgttcagtgaggctgatgcctgc
gaggtctggatcgacgagaaggagcagtggctcaacagcatggagattccagagaagctg
gaggacctggaagttattcagcacaggttcgagagtctggagcctgagatgaataaccag
gcgtcccgtgtcgctgtggtcaatcagatcgcccggcagctgatacacagtggacacccc
agcgagaaggacatcaaggctcagcaggacaaactgaacaccaggtggagccagttcaga
gacttggtggaccagaagaaggagtcgcttaactcagcgctgggtgtccagaactatcac
ctggactgcaacgagaccaagtcgtggatccgtgagaagaccaaagtgatcgagtccact
caggacctgggtaatgacctgaccggagtcatggcactgcagcgcaagctgacggggatg
gagcgggacctggccgccatcgaggccaaactgggtgacctgcgtggagaggcagagcgt
ctggcagctgagcatcctgaacaagccaaggctatcacgggcaggttggcggagatcggc
ggtgtctgggaagagctgaaggacacgctgcaaaaccgcgaggcctctctgggtgaagca
agcaagctgcaacagttcctccgccagctggatgacttccagtcatggctgtctcgcacg
caaacggccatcgcctctgaggatatgcccaacaccctagccgaggctgagaagcttctc
gcccaacacgaaggcatcaagcacgagatcgacaattacgaagaggactaccagaagatg
cgggacatgggcgagatggtgacccaaggccagacggacgcccagcacatgttcctgagg
cagcggctgcaggcactggacaccggttggaacgagctgcataagatgtgggagaaccgt
cagaacctcctgtcccagtctcacgcctaccaactgttcctcagggacactaagcaggcc
gagaccttcctcaacaatcaggagtatgtgctggcccacactgagatgcccaccactcta
gaaggagcagaagctgctattaagaagcaagaggacttcatgaccactatggacgccaac
gaggagaagatcaacggcgtggtggaggccggacgcagactggccagtgacggaaacatc
aacgctgagaagattcaggagagagcaacttccattgatgacagacataagaagaaccgt
gaggcggctgtggagctcctgatgagacttaaagataaccgagacctacagaagttcctg
caggactgccaggagctgtctctgtggataaacgagaagatgctgacggcgcaggacatg
tcgtacgacgaggccagaaacctgcacagcaagtggctcaagcaccaagccttcatggcc
gagctccaatccaacaaagagtggctggaaaagattgataaagaagggatgcagctggtc
tcagagaagcctgagacagaggccgtggtcaaggagaagctgacggtactgcagacgcag
tggcaggagcttgagtccaccacgcagaccaaagcgcagtgcctgttcgatgccaacaag
gccgagctgttcacgcagagctgcgccgatctcgacaagtggctggcgggtctggagggt
cagatccaatcagacgactacggcaaagatctaaccagtgtcaacatcctgctgaagaaa
caacagatgctggagaagcaggtggaggtgcgtaagagggaggtggaggaacttcagtcg
caggctcacgtgctgcagcaggagggcaaggacacggacgaggtggacgggcggcgcgag
gtggtggagaagaagctccaagagctgctcgatcctcttcagaagaggaagaactttctc
atggcttccagggagattcaccagtttaaccgcgacgtcgaggacgaaattctctgggtt
gaggagaggatgcctctggctacttcaacagaccatgggcacaacttacagactgttcag
atgctcatcaagaagaaccagaccctgcagaaggagatccagggacaccagccacgctgc
gatgacatcttcgagcgcagcgagagcatcgtgacggaggacaccccgagcgtggaggct
atcagagcacgtctcgctgagctacaagacctctggaacctcctcatccaggagacagcg
aagcggcacgagcggctggaggaggcccatcaggcgcagcagtactacttcgacgcggcc
gaggcggaggcctggatgagcgaacaggagctttacatgatgtcagaggagaaagctaag
gatgaacagagctccgtagccatgctgaagaaacaccagatcctagagcaggcgatggag
gactacgccgacaccgttcatcagctctccaagaccagccgcggtctggtggctgacaat
caccccgaaagtgagagaataggcatgcggcaatcacaggtggataagctgtacgcagga
ctgaaggacctttcggaggagaggagaggaaaactggacgagaggttccgtcttttccag
ctgaaccgcgaggtggacgatctggagcagtggatcgctgagagagaagtggtggcagga
tctcacgagctgggccaggactacgagcacgtcactatgctgcaggaacgtttccgtgag
ttcgcccgcgacaccgggaacatcggtcaggaacgtgtggacggtgtaaaccggatggcc
gatgacctcatcaacgccggccacgctgacgctgcgaccgtcgccgagtggaaggacggg
cttaacgaggcctgggcggaccttctggagctgatcgacactcgcacacagatcctcgcg
gcttcctacgagctgcataagttctaccacgacgtcaaggagatcctgagccgcatcctg
gacaagcacaagaagcttccggaagagctcggacgagaccagaacacggtggaggcactc
cagaggatgcacaccacctttgaacacgacattcaagcactggggacgcaggtcaggcag
ctgcaggacgacgcgacacgtttgcagtcggcgtatgccggcgataaggctgacgatatc
caacggagggagagcgaagtcctggacgcgtggcggaaccttctggaagcctgtgaagga
cggagggcgcgtctgctcgacaccggagacaagttccgcttcttcaatatggtgcgtgac
ctcatgctctggatggaggacgtcatccgtctcatcgaggctcaggagaatcccagggac
gtctcctctgtggagctacttatgaacaaccaccagggcatcaaggccgagatcgacgcg
cgcaacgacagtttcaccgcctgcatcgagctgggcaagtctctactggcacgcaaacac
tacgcatcagatgagattaaagaaaagttgctacagttgacggacaagaggaaagaaatg
attgacaaatgggaggacagatgggagtggctaagactgattttggaagtgcaccagttt
tcaagggacgcgggggtagccgaggcgtggttgctgggtcaggagccgtacctgtccagt
aaggaggtgggtcagagtgtggacgaggtggagaagttgatcaagaggcacgaggcattc
gagaagtcagccgctacctgggaggaacgcttctctgcgctggagaggctgactacgttg
gagttactggaagtgagaagaaggcaagaagaagaggagagaagaagaaaacccccgacg
ccagagccggagcaggagatcgaggcacagcagagagaaggagagcagattgctcagaac
ggactgccgtcagaccaggaatccccacgggacggagtggacggagaaatcgtgaacggc
gtgcccgagcggagctctaaggagccgagtcccatcccatccccgacctcaggcagacgc
ggtaagggcagccaatcgtccaccctgccggccaaaagtcaagagtctccctccgcccag
ttggagggcttcctacaccgcaagcatgagtttgagggccacaacaagaaggcatccaac
aggtcctggcataacgtgtactgcgttatcaacaaccaagagatgggcttctacaaagac
aacaagaacgccgggcagggcatcccgtaccacaacgagatccccgtcagcctgaaggac
gccgtctgcgaggtcgccatcgactacaagaagaagaagcacgtcttcaaactgagagtg
acaaacggaaacgagtatctcttccaagccaaagatgacgaggagatgaacacgtggatg
caggctattcagaacgcagtcagcggctcctccccttcggacaagtctgacgttacgcct
agcaaccagagcactcctgcctccagccgtgcccacacactcccggcaaccgtcaccttg
acgaccgagtcgagcccgggcaagcgggagaaagacaaggagaaagacaaagagaagcgt
ttcagtctcttcagcaagaagaagcagtag
DBGET
integrated database retrieval system
