Ictalurus furcatus (blue catfish): 128614285
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Entry
128614285 CDS
T09387
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128614285 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ifu04812
]
128614285 (sptbn1)
Cytoskeleton proteins [BR:
ifu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128614285 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
128614285 (sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
128614285
NCBI-ProteinID:
XP_053491661
LinkDB
All DBs
Position
10:26763897..26847867
Genome browser
AA seq
2349 aa
AA seq
DB search
MTTVAAEYDHMDIQQQYQDTVNNRWDEEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGEKLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVVTEDNKEKRSAKDALLL
WCQMKTAGYSNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVQAV
VAVAKELEAENYHDIKRIAARKDNVLRLWDYLLELLKARRQRLEMNLGVQRVFQEMLYIM
DWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVRAVNANAQKFAVDDEGY
KPCDPQVIRDRVAHLEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQIL
SSDDVGKDLTGAVRLLSKHRALEDEMSGRAGHLQHTVREGQAMADAGHFGEAKIRERVAD
VQAQWTALERLAAVRKARLEQACSLHQFQADADDVDAWMLDALRIVSSDDVGHDEFSTQA
LVKKHKDAVADVASYRPVIDSLHEQAQALPDELAQSTDISERLAGIEERYKELAEITRLR
KQALQDALALYKMFSEADACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQ
ASRVAVVNQIARQLIHSGHPSEKDIKAQQDKLNTRWSQFRDLVDQKKESLNSALGVQNYH
LDCNETKSWIREKTKVIESTQDLGNDLTGVMALQRKLTGMERDLAAIEAKLGDLRGEAER
LAAEHPEQAKAITGRLAEIGGVWEELKDTLQNREASLGEASKLQQFLRQLDDFQSWLSRT
QTAIASEDMPNTLAEAEKLLAQHEGIKHEIDNYEEDYQKMRDMGEMVTQGQTDAQHMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAETFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEEKINGVVEAGRRLASDGNINAEKIQERATSIDDRHKKNR
EAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELQSNKEWLEKIDKEGMQLVSEKPETEAVVKEKLTVLQTQWQELESTTQTKAQCLFDANK
AELFTQSCADLDKWLAGLEGQIQSDDYGKDLTSVNILLKKQQMLEKQVEVRKREVEELQS
QAHVLQQEGKDTDEVDGRREVVEKKLQELLDPLQKRKNFLMASREIHQFNRDVEDEILWV
EERMPLATSTDHGHNLQTVQMLIKKNQTLQKEIQGHQPRCDDIFERSESIVTEDTPSVEA
IRARLAELQDLWNLLIQETAKRHERLEEAHQAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSSVAMLKKHQILEQAMEDYADTVHQLSKTSRGLVADNHPESERIGMRQSQVDKLYAG
LKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDGVNRMADDLINAGHADAATVAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDVKEILSRILDKHKKLPEELGRDQNTVEALQRMHTTFEHDIQALGTQVRQ
LQDDATRLQSAYAGDKADDIQRRESEVLDAWRNLLEACEGRRARLLDTGDKFRFFNMVRD
LMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLARKH
YASDEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSS
KEVGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRRQEEEERRRKPPT
PEPEQEIEAQQREGEQIAQNGLPSDQESPRDGVDGEIVNGVPERSSKEPSPIPSPTSGRR
GKGSQSSTLPAKSQESPSAQLEGFLHRKHEFEGHNKKASNRSWHNVYCVINNQEMGFYKD
NKNAGQGIPYHNEIPVSLKDAVCEVAIDYKKKKHVFKLRVTNGNEYLFQAKDDEEMNTWM
QAIQNAVSGSSPSDKSDVTPSNQSTPASSRAHTLPATVTLTTESSPGKREKDKEKDKEKR
FSLFSKKKQ
NT seq
7050 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgccgaatatgaccacatggacatccagcagcagtaccaggatact
gtcaacaaccgctgggatgaggagtgggacaacgagaacagctcggcccgcctgttcgag
cgctcacgcatcaaggccttagcagatgagcgtgaggcggtgcagaagaagaccttcaca
aaatgggtcaactcacacctggcacgggtctcctgccgcatcacagacctgtacatggac
ctacgggatggacgcatgcttatcaagctcctggaggtgctctctggagagaagctgccc
aaacccacgaagggccgaatgagaatccactgtctggagaatgtggataaagccctgcag
ttcctaaaggagcaacgtgtccacctggagaacatgggctcccatgacatcgtcgatggc
aaccatcgcctcacgctcggcctcatctggaccatcatcctccgcttccagatccaagac
atcagcgttgtaacagaagacaataaagagaagcgttcggctaaagacgctctgctcctg
tggtgtcagatgaagacggcaggctattcaaatgtcaacatccacaacttcaccaccagc
tggcgcgacggaatggcgttcaacgccctcatccacaaacacaggccggatcttattgat
tttgacaagctgaagaagtccaacgctcactacaatcttcagaatgccttcaacttggcc
gagcagcacctgggcctcactaaactgctcgaccctgaggatatcagcgtagaccatcct
gatgagaagtcagtcatcacctacgtcgtcacatactaccactacttctccaaaatgaag
gctctgaaggtggagggcaaacgtattggcaaagttctggataacgccatcgaaacagag
aagatgatcgagaaatacgagtctcttgcgtcggaccttctggagtggatcgagcagacc
atcatcatcctgaacaaccgcaagtttgctaattctctagtaggagtccagcagcagctc
caggccttcaacacgtaccgcactgtagagaagcctcccaagttcacagagaaaggtaac
ctggaagtccttctgttcacgatccagagcaaaatgagagccaacaaccagaaagtctac
atgccgagggagggcaagctcatctccgacatcaacaaggcctgggagcgtctggagaag
gcggagcatgagcgtgagctggccctgaggaacgagctgattcgtcaggagaagctggag
cagctggcgcgccgcttcgaccgcaaggcggccatgagagaaacctggctcagcgagaac
caacggctggtgtcacaggacaacttcggcttcgacctccaggcagtggaggcggccacc
aagaagcacgaagccatcgagacggacatcgcagcctacgaggagcgtgtgcaagccgtg
gtggccgtagctaaagagctggaagcggagaactaccacgacatcaagcgtattgcggca
cgtaaggataacgtgctgcggctctgggactacctactggagctgctgaaggcacgcagg
cagaggctggagatgaacctgggtgtgcagcgtgtcttccaggaaatgctctacatcatg
gactggatggatgagatgaagatgctactgctgtctcaggactacgggaagcacttgctg
ggagtggaagatctgctccagaaacacgctctggtggaggctgatatcgccatccaggcc
gaccgagtgcgggccgtcaacgccaacgcacagaaattcgctgttgatgatgaaggttac
aagccgtgtgatccgcaggtgatccgtgatcgcgtggctcacctggagttctgctaccag
gagttgacgcagctggcggctgagcgacgcgcacgtctggaggagtctcgtcgactctgg
aagttcttctgggaaatggctgaggaggagggttggatccgtgagaaggagcagatcctg
tcatcagacgacgtcggcaaggacctgactggtgccgtgcgtttgctgagtaagcaccgg
gcgcttgaggacgagatgagtggccgagccgggcacctgcagcacacggtgcgtgagggt
caggcgatggctgacgccggacactttggcgaggccaagatccgcgagcgtgtggccgat
gtgcaggctcagtggacggcgctggagcgactcgctgcagtccggaaggcacgtctagag
caggcgtgcagcttgcaccagttccaagctgatgctgacgatgtggacgcctggatgctg
gacgcgctgcgcatcgtctcgagtgacgacgtcggccacgatgagttctccacgcaggcg
ctggttaagaagcacaaggacgcggtagccgacgtggccagctaccggcccgtgatcgat
tcactccacgagcaggctcaggcactgcccgatgagctggcccagtcaaccgacatcagc
gaacgcctggcgggcatcgaggagcgctataaggagctggcagagatcacccggctgagg
aagcaggctctgcaggatgcactggctctctataagatgttcagtgaggctgatgcctgc
gaggtctggatcgacgagaaggagcagtggctcaacagcatggagattccagagaagctg
gaggacctggaagttattcagcacaggttcgagagtctggagcctgagatgaataaccag
gcgtcccgtgtcgctgtggtcaatcagatcgcccggcagctgatacacagtggacacccc
agcgagaaggacatcaaggctcagcaggacaaactgaacaccaggtggagccagttcaga
gacttggtggaccagaagaaggagtcgcttaactcagcgctgggtgtccagaactatcac
ctggactgcaacgagaccaagtcgtggatccgtgagaagaccaaagtgatcgagtccact
caggacctgggtaatgacctgaccggagtcatggcactgcagcgcaagctgacggggatg
gagcgggacctggccgccatcgaggccaaactgggtgacctgcgtggagaggcagagcgt
ctggcagctgagcatcctgaacaagccaaggctatcacgggcaggttggcggagatcggc
ggtgtctgggaagagctgaaggacacgctgcaaaaccgcgaggcctctctgggtgaagca
agcaagctgcaacagttcctccgccagctggatgacttccagtcatggctgtctcgcacg
caaacggccatcgcctctgaggatatgcccaacaccctagccgaggctgagaagcttctc
gcccaacacgaaggcatcaagcacgagatcgacaattacgaagaggactaccagaagatg
cgggacatgggcgagatggtgacccaaggccagacggacgcccagcacatgttcctgagg
cagcggctgcaggcactggacaccggttggaacgagctgcataagatgtgggagaaccgt
cagaacctcctgtcccagtctcacgcctaccaactgttcctcagggacactaagcaggcc
gagaccttcctcaacaatcaggagtatgtgctggcccacactgagatgcccaccactcta
gaaggagcagaagctgctattaagaagcaagaggacttcatgaccactatggacgccaac
gaggagaagatcaacggcgtggtggaggccggacgcagactggccagtgacggaaacatc
aacgctgagaagattcaggagagagcaacttccattgatgacagacataagaagaaccgt
gaggcggctgtggagctcctgatgagacttaaagataaccgagacctacagaagttcctg
caggactgccaggagctgtctctgtggataaacgagaagatgctgacggcgcaggacatg
tcgtacgacgaggccagaaacctgcacagcaagtggctcaagcaccaagccttcatggcc
gagctccaatccaacaaagagtggctggaaaagattgataaagaagggatgcagctggtc
tcagagaagcctgagacagaggccgtggtcaaggagaagctgacggtactgcagacgcag
tggcaggagcttgagtccaccacgcagaccaaagcgcagtgcctgttcgatgccaacaag
gccgagctgttcacgcagagctgcgccgatctcgacaagtggctggcgggtctggagggt
cagatccaatcagacgactacggcaaagatctaaccagtgtcaacatcctgctgaagaaa
caacagatgctggagaagcaggtggaggtgcgtaagagggaggtggaggaacttcagtcg
caggctcacgtgctgcagcaggagggcaaggacacggacgaggtggacgggcggcgcgag
gtggtggagaagaagctccaagagctgctcgatcctcttcagaagaggaagaactttctc
atggcttccagggagattcaccagtttaaccgcgacgtcgaggacgaaattctctgggtt
gaggagaggatgcctctggctacttcaacagaccatgggcacaacttacagactgttcag
atgctcatcaagaagaaccagaccctgcagaaggagatccagggacaccagccacgctgc
gatgacatcttcgagcgcagcgagagcatcgtgacggaggacaccccgagcgtggaggct
atcagagcacgtctcgctgagctacaagacctctggaacctcctcatccaggagacagcg
aagcggcacgagcggctggaggaggcccatcaggcgcagcagtactacttcgacgcggcc
gaggcggaggcctggatgagcgaacaggagctttacatgatgtcagaggagaaagctaag
gatgaacagagctccgtagccatgctgaagaaacaccagatcctagagcaggcgatggag
gactacgccgacaccgttcatcagctctccaagaccagccgcggtctggtggctgacaat
caccccgaaagtgagagaataggcatgcggcaatcacaggtggataagctgtacgcagga
ctgaaggacctttcggaggagaggagaggaaaactggacgagaggttccgtcttttccag
ctgaaccgcgaggtggacgatctggagcagtggatcgctgagagagaagtggtggcagga
tctcacgagctgggccaggactacgagcacgtcactatgctgcaggaacgtttccgtgag
ttcgcccgcgacaccgggaacatcggtcaggaacgtgtggacggtgtaaaccggatggcc
gatgacctcatcaacgccggccacgctgacgctgcgaccgtcgccgagtggaaggacggg
cttaacgaggcctgggcggaccttctggagctgatcgacactcgcacacagatcctcgcg
gcttcctacgagctgcataagttctaccacgacgtcaaggagatcctgagccgcatcctg
gacaagcacaagaagcttccggaagagctcggacgagaccagaacacggtggaggcactc
cagaggatgcacaccacctttgaacacgacattcaagcactggggacgcaggtcaggcag
ctgcaggacgacgcgacacgtttgcagtcggcgtatgccggcgataaggctgacgatatc
caacggagggagagcgaagtcctggacgcgtggcggaaccttctggaagcctgtgaagga
cggagggcgcgtctgctcgacaccggagacaagttccgcttcttcaatatggtgcgtgac
ctcatgctctggatggaggacgtcatccgtctcatcgaggctcaggagaatcccagggac
gtctcctctgtggagctacttatgaacaaccaccagggcatcaaggccgagatcgacgcg
cgcaacgacagtttcaccgcctgcatcgagctgggcaagtctctactggcacgcaaacac
tacgcatcagatgagattaaagaaaagttgctacagttgacggacaagaggaaagaaatg
attgacaaatgggaggacagatgggagtggctaagactgattttggaagtgcaccagttt
tcaagggacgcgggggtagccgaggcgtggttgctgggtcaggagccgtacctgtccagt
aaggaggtgggtcagagtgtggacgaggtggagaagttgatcaagaggcacgaggcattc
gagaagtcagccgctacctgggaggaacgcttctctgcgctggagaggctgactacgttg
gagttactggaagtgagaagaaggcaagaagaagaggagagaagaagaaaacccccgacg
ccagagccggagcaggagatcgaggcacagcagagagaaggagagcagattgctcagaac
ggactgccgtcagaccaggaatccccacgggacggagtggacggagaaatcgtgaacggc
gtgcccgagcggagctctaaggagccgagtcccatcccatccccgacctcaggcagacgc
ggtaagggcagccaatcgtccaccctgccggccaaaagtcaagagtctccctccgcccag
ttggagggcttcctacaccgcaagcatgagtttgagggccacaacaagaaggcatccaac
aggtcctggcataacgtgtactgcgttatcaacaaccaagagatgggcttctacaaagac
aacaagaacgccgggcagggcatcccgtaccacaacgagatccccgtcagcctgaaggac
gccgtctgcgaggtcgccatcgactacaagaagaagaagcacgtcttcaaactgagagtg
acaaacggaaacgagtatctcttccaagccaaagatgacgaggagatgaacacgtggatg
caggctattcagaacgcagtcagcggctcctccccttcggacaagtctgacgttacgcct
agcaaccagagcactcctgcctccagccgtgcccacacactcccggcaaccgtcaccttg
acgaccgagtcgagcccgggcaagcgggagaaagacaaggagaaagacaaagagaagcgt
ttcagtctcttcagcaagaagaagcagtag
DBGET
integrated database retrieval system
